Factsheet for HORVU3Hr1G074640.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G032230.4
HORVU1Hr1G068220.1
HORVU2Hr1G016580.5
HORVU3Hr1G042790.4
HORVU3Hr1G042830.1
HORVU3Hr1G079010.5
HORVU4Hr1G052330.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G45110.1	HORVU0Hr1G032230.4	AT5G06960.1	21798944
AT5G45110.1	HORVU1Hr1G068220.1	AT5G06960.1	21798944
AT5G45110.1	HORVU2Hr1G016580.5	AT5G06960.1	21798944
AT5G45110.1	HORVU3Hr1G042790.4	AT5G06960.1	21798944
AT5G45110.1	HORVU3Hr1G042830.1	AT5G06960.1	21798944
AT5G45110.1	HORVU3Hr1G079010.5	AT5G06960.1	21798944
AT5G45110.1	HORVU4Hr1G052330.3	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G337700.1	Wheat	plastid	93.35	94.58
TraesCS3D01G302900.1	Wheat	cytosol, plastid	92.54	94.07
TraesCS3A01G298800.1	Wheat	plastid	94.0	93.85
Zm00001d012660_P002	Maize	cytosol	77.47	76.97
Os01t0767900-01	Rice	plastid	79.09	76.85
EES01524	Sorghum	plastid	77.31	76.81
GSMUA_Achr5P02120_001	Banana	cytosol	61.43	64.9
GSMUA_Achr4P32060_001	Banana	cytosol, plastid	62.4	64.71
VIT_10s0042g01250.t01	Wine grape	cytosol, plastid	56.24	59.11
KRH36735	Soybean	cytosol, plastid	55.27	57.8
KRH11740	Soybean	plastid	54.62	57.12
PGSC0003DMT400054660	Potato	cytosol, plastid	53.0	56.28
Solyc02g069310.2.1	Tomato	cytosol, plastid	52.35	55.59
KRH73603	Soybean	cytosol, plastid	49.92	52.2
KRH14520	Soybean	cytosol, plastid	49.27	51.53
Solyc07g044980.2.1	Tomato	nucleus	47.49	51.13
PGSC0003DMT400002412	Potato	cytosol	47.65	51.13
CDY26398	Canola	plastid	46.52	51.07
CDX78955	Canola	plastid	48.62	51.02
Bra013416.1-P	Field mustard	plastid	48.62	51.02
CDX99350	Canola	plastid	48.62	51.02
CDX82577	Canola	plastid	44.41	50.55
CDY39410	Canola	plastid	44.57	50.37
Bra025093.1-P	Field mustard	plastid	44.57	50.37
Bra021949.1-P	Field mustard	plastid	45.7	50.18
HORVU4Hr1G003040.1	Barley	cytosol, plastid	47.49	49.75
AT5G45110.1	Thale cress	cytosol, plastid	47.16	49.66
AT4G19660.2	Thale cress	cytosol, plastid	47.49	48.75
HORVU3Hr1G019230.6	Barley	cytosol	38.09	39.3
CDY36698	Canola	cytosol	32.41	39.29
HORVU3Hr1G106880.5	Barley	cytosol	20.26	24.37

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.1	Gene3D:3.30.710.10	UniProt:A0A287LP93	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU3Hr1G074640
EnsemblPlants:HORVU3Hr1G074640.4	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	InterPro:NPR1/NIM1-like_C
InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900	PFAM:PF12313	PFAM:PF13637	PFscan:PS50088
PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF124	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI000B46B2D8	SEG:seg	:

Description

No Description!

Coordinates

chrchr3H:-:559037425..559040306

Molecular Weight (calculated)

67433.3 Da

IEP (calculated)

6.106

GRAVY (calculated)

-0.300

Length

617 amino acids

Sequence
(BLAST)

001: MEPSSSITFA DSSSYLSNGS SPCSVALAPL PAADGWGGGG GGGGGGSSSN VEAVSLNRLS NNLESLLLDS DLDCSDADIH VADGGPPIPV HRCILGARSS
101: FFKDLFRARG NRTDGAVTAS ASATGGGAGG DVTGRPQYKM EDLVPGGRVG REAFLGLMRY LYTGRLRAAP LDVVSCADLV CPHDSCPPAI RFAVELMYAA
201: WTFRIPELMS LFQRRLMNFV DKTLAEDVLP ILQVAFHSEL TQVREKCVQR IARSDLDNMS LDKELPPEIA DEIKKIRQKS PPIDGNTIIS DPVHEKRVTR
301: IHRALDSDDV ELVRLLLNES EITLDDANAL HYAAAYCDSK VLTELLGLEL ANLNLKNSRG YTALHLAAMR REPAIIMCLL SKGAVASQLT DDGRLASNIC
401: RRLTRLKDYN AKMEQGQESN KDRMCIDILE REMMRNPMTA EDSVTSPLLA DDLHMKLSYL ENRVAFARLF FPAEAKVAMQ IAQADITPEV GGFSAASTSG
501: KLREVDLNET PVTKNKRLRS RVDALAKTVE LGRRYFPNCS QVLDKFLEDG LPDSLDAFQQ QSGTPDEQLV KKMRFYEVKE DVRKAFSKDT ADNSVFSALS
601: SNSSSSAKKK PQNSTRR

Best Arabidopsis Sequence Match ( AT5G45110.1 )
(BLAST)

001: MATLTEPSSS LSFTSSHFSY GSIGSNHFSS SSASNPEVVS LTKLSSNLEQ LLSNSDCDYS DAEIIVDGVP VGVHRCILAA RSKFFQDLFK KEKKISKTEK
101: PKYQLREMLP YGAVAHEAFL YFLSYIYTGR LKPFPLEVST CVDPVCSHDC CRPAIDFVVQ LMYASSVLQV PELVSSFQRR LCNFVEKTLV ENVLPILMVA
201: FNCKLTQLLD QCIERVARSD LYRFCIEKEV PPEVAEKIKQ LRLISPQDEE TSPKISEKLL ERIGKILKAL DSDDVELVKL LLTESDITLD QANGLHYSVV
301: YSDPKVVAEI LALDMGDVNY RNSRGYTVLH FAAMRREPSI IISLIDKGAN ASEFTSDGRS AVNILRRLTN PKDYHTKTAK GRESSKARLC IDILEREIRK
401: NPMVLDTPMC SISMPEDLQM RLLYLEKRVG LAQLFFPTEA KVAMDIGNVE GTSEFTGLSP PSSGLTGNLS QVDLNETPHM QTQRLLTRMV ALMKTVETGR
501: RFFPYGSEVL DKYMAEYIDD DILDDFHFEK GSTHERRLKR MRYRELKDDV QKAYSKDKES KIARSCLSAS SSPSSSSIRD DLHNTT

Arabidopsis Description

NPR3NPR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UGU4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.