Factsheet for TraesCS3B01G337700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G096300.1
TraesCS1B01G127400.1
TraesCS1D01G105300.1
TraesCS2A01G097500.2
TraesCS2B01G113200.2
TraesCS2D01G096800.2
TraesCS3A01G190700.2
TraesCS3A01G334100.1
TraesCS3B01G220400.2
TraesCS3B01G365100.1
TraesCS3D01G194800.2
TraesCS3D01G327600.1
TraesCS4A01G126300.2
TraesCS4B01G178600.1
TraesCS4D01G180200.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G45110.1	TraesCS1A01G096300.1	AT5G06960.1	21798944
AT5G45110.1	TraesCS1B01G127400.1	AT5G06960.1	21798944
AT5G45110.1	TraesCS1D01G105300.1	AT5G06960.1	21798944
AT5G45110.1	TraesCS2A01G097500.2	AT5G06960.1	21798944
AT5G45110.1	TraesCS2B01G113200.2	AT5G06960.1	21798944
AT5G45110.1	TraesCS2D01G096800.2	AT5G06960.1	21798944
AT5G45110.1	TraesCS3A01G190700.2	AT5G06960.1	21798944
AT5G45110.1	TraesCS3A01G334100.1	AT5G06960.1	21798944
AT5G45110.1	TraesCS3B01G220400.2	AT5G06960.1	21798944
AT5G45110.1	TraesCS3B01G365100.1	AT5G06960.1	21798944
AT5G45110.1	TraesCS3D01G194800.2	AT5G06960.1	21798944
AT5G45110.1	TraesCS3D01G327600.1	AT5G06960.1	21798944
AT5G45110.1	TraesCS4A01G126300.2	AT5G06960.1	21798944
AT5G45110.1	TraesCS4B01G178600.1	AT5G06960.1	21798944
AT5G45110.1	TraesCS4D01G180200.4	AT5G06960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G302900.1	Wheat	cytosol, plastid	97.21	97.53
TraesCS3A01G298800.1	Wheat	plastid	98.03	96.6
HORVU3Hr1G074640.4	Barley	cytosol, plastid	94.58	93.35
Zm00001d012660_P002	Maize	cytosol	79.47	77.94
EES01524	Sorghum	plastid	79.31	77.78
Os01t0767900-01	Rice	plastid	80.62	77.32
GSMUA_Achr5P02120_001	Banana	cytosol	62.23	64.9
GSMUA_Achr4P32060_001	Banana	cytosol, plastid	63.05	64.54
VIT_10s0042g01250.t01	Wine grape	cytosol, plastid	56.98	59.11
KRH36735	Soybean	cytosol, plastid	56.49	58.31
KRH11740	Soybean	plastid	55.66	57.46
PGSC0003DMT400054660	Potato	cytosol, plastid	53.53	56.11
Solyc02g069310.2.1	Tomato	cytosol, plastid	52.87	55.42
KRH73603	Soybean	cytosol, plastid	50.25	51.86
CDY26398	Canola	plastid	47.62	51.6
KRH14520	Soybean	cytosol, plastid	49.75	51.36
CDX78955	Canola	plastid	49.43	51.19
Bra013416.1-P	Field mustard	plastid	49.43	51.19
CDX99350	Canola	plastid	49.26	51.02
CDX82577	Canola	plastid	45.16	50.74
CDY39410	Canola	plastid	45.32	50.55
Bra021949.1-P	Field mustard	plastid	46.63	50.53
PGSC0003DMT400002412	Potato	cytosol	47.62	50.43
Bra025093.1-P	Field mustard	plastid	45.16	50.37
AT5G45110.1	Thale cress	cytosol, plastid	48.28	50.17
Solyc07g044980.2.1	Tomato	nucleus	47.13	50.09
TraesCS4B01G018900.2	Wheat	cytosol, plastid	48.6	49.25
AT4G19660.2	Thale cress	cytosol, plastid	48.28	48.92
CDY36698	Canola	cytosol	33.0	39.49
TraesCS3B01G123800.1	Wheat	cytosol	37.11	39.17
TraesCS3B01G537400.1	Wheat	cytosol	21.18	25.1
TraesCS5B01G133700.1	Wheat	cytosol	20.2	24.95

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.1	Gene3D:3.30.710.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	InterPro:NPR1/NIM1-like_C	InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900
PFAM:PF12313	PFAM:PF13637	PFscan:PS50088	PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413
PANTHER:PTHR24413:SF124	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695
EnsemblPlantsGene:TraesCS3B01G337700	EnsemblPlants:TraesCS3B01G337700.1	TIGR:cd00204	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:+:544109302..544112123

Molecular Weight (calculated)

66457.3 Da

IEP (calculated)

5.598

GRAVY (calculated)

-0.238

Length

609 amino acids

Sequence
(BLAST)

001: MEPSSSITFA SSSSYLSNGS SPCSVALAPL PAADGWGGGG GGGGSSSSVE AVSLNRLSNN LERLLLDSEL DCSDADVDVA DGGPPIPVHR CILAARSPFF
101: HDLFRARGSR SDGAVTASAS ASATSGGAGG DVTGRPQYKM EDLVPGGRVG REAFLAFMGY LYTGRLRPAP LDVVSCADLV CPHDSCPPAI RFAVELMYAA
201: WTFRIPELMS LFQRRLMNFV DKTLAEDVLP ILQVAFHSEL TQVRGKCVQR IARSDLDIMS LDKELPPEIA DEIKKIRQKS PPIDGDTIIS DPVHDKRVRR
301: IHRALDSDDV ELVKLLLNES EITLDDANAL HYAAAYCDSK VLTELLGLEL ANLNLKNSRG YTALHLAAMR REPAIIMCLL SKGAVASQLT DDGRLASNIC
401: RRLTRLKDYN AKMEQGQESN KDRMCIDILE REMMRNPMTA EDSVTSPLLA DDLHMKLSYL ENRVAFARLF FPAEAKVAMQ IAQADVTPEV GVFSAASTSG
501: KLREVDLNET PVTKNKRLRS RVDALAKTVE LGRRYFPNCS QVLDKFLEDG LPDGLDAFQQ QSGTPDEQQV KKMRFCEVKE DVRKAYSKDT ADKSMFSALS
601: SNSSSSAMK

Best Arabidopsis Sequence Match ( AT5G45110.1 )
(BLAST)

001: MATLTEPSSS LSFTSSHFSY GSIGSNHFSS SSASNPEVVS LTKLSSNLEQ LLSNSDCDYS DAEIIVDGVP VGVHRCILAA RSKFFQDLFK KEKKISKTEK
101: PKYQLREMLP YGAVAHEAFL YFLSYIYTGR LKPFPLEVST CVDPVCSHDC CRPAIDFVVQ LMYASSVLQV PELVSSFQRR LCNFVEKTLV ENVLPILMVA
201: FNCKLTQLLD QCIERVARSD LYRFCIEKEV PPEVAEKIKQ LRLISPQDEE TSPKISEKLL ERIGKILKAL DSDDVELVKL LLTESDITLD QANGLHYSVV
301: YSDPKVVAEI LALDMGDVNY RNSRGYTVLH FAAMRREPSI IISLIDKGAN ASEFTSDGRS AVNILRRLTN PKDYHTKTAK GRESSKARLC IDILEREIRK
401: NPMVLDTPMC SISMPEDLQM RLLYLEKRVG LAQLFFPTEA KVAMDIGNVE GTSEFTGLSP PSSGLTGNLS QVDLNETPHM QTQRLLTRMV ALMKTVETGR
501: RFFPYGSEVL DKYMAEYIDD DILDDFHFEK GSTHERRLKR MRYRELKDDV QKAYSKDKES KIARSCLSAS SSPSSSSIRD DLHNTT

Arabidopsis Description

NPR3NPR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UGU4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.