CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013416.1-P	Field mustard	plastid	98.98	98.98
CDX99350	Canola	plastid	97.96	97.96
AT4G19660.2	Thale cress	cytosol, plastid	80.44	78.7
CDX82577	Canola	plastid	68.54	74.35
CDY39410	Canola	plastid	68.88	74.18
CDY26398	Canola	plastid	70.75	74.02
KRH36735	Soybean	cytosol, plastid	62.07	61.86
KRH11740	Soybean	plastid	61.73	61.53
VIT_10s0042g01250.t01	Wine grape	cytosol, plastid	59.35	59.45
CDY36698	Canola	cytosol	50.51	58.35
Solyc02g069310.2.1	Tomato	cytosol, plastid	53.91	54.56
PGSC0003DMT400054660	Potato	cytosol, plastid	53.57	54.22
GSMUA_Achr5P02120_001	Banana	cytosol	53.74	54.11
GSMUA_Achr4P32060_001	Banana	cytosol, plastid	53.4	52.77
Zm00001d012660_P002	Maize	cytosol	54.08	51.21
EES01524	Sorghum	plastid	53.74	50.89
TraesCS3B01G337700.1	Wheat	plastid	51.19	49.43
TraesCS3D01G302900.1	Wheat	cytosol, plastid	50.51	48.93
HORVU3Hr1G074640.4	Barley	cytosol, plastid	51.02	48.62
TraesCS3A01G298800.1	Wheat	plastid	51.02	48.54
Os01t0767900-01	Rice	plastid	52.21	48.35
Zm00001d034944_P004	Maize	cytosol	35.88	46.37
Os03t0667100-01	Rice	cytosol	45.07	44.99
EER91108	Sorghum	plastid	45.24	44.48
HORVU4Hr1G003040.1	Barley	cytosol, plastid	43.03	42.95
TraesCS4A01G294400.1	Wheat	cytosol, plastid	43.88	42.93
TraesCS4B01G018900.2	Wheat	cytosol, plastid	43.71	42.76
TraesCS4D01G017500.1	Wheat	cytosol	43.2	42.62
Zm00001d013581_P001	Maize	cytosol	13.95	40.8
CDY25575	Canola	cytosol	37.24	38.42
CDY34413	Canola	cytosol	37.07	38.31
CDY50004	Canola	cytosol	34.52	34.06
CDX89362	Canola	cytosol	35.03	34.05
CDX94371	Canola	cytosol	34.86	33.88
CDX89364	Canola	cytosol	33.5	32.4
CDX94376	Canola	cytosol	33.33	32.34
CDY23854	Canola	cytosol	22.11	27.03
CDX72067	Canola	cytosol	21.26	27.0
CDY06130	Canola	cytosol	21.09	26.84
CDX79940	Canola	cytosol	14.46	26.81
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	22.11	26.69
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	22.11	26.69
CDY30971	Canola	cytosol	20.41	26.37
CDX67678	Canola	cytosol, endoplasmic reticulum, plastid	20.58	26.19
CDX76040	Canola	cytosol	12.59	25.43
CDY35774	Canola	cytosol	12.41	25.09
CDY33841	Canola	cytosol	3.91	23.23
CDY14314	Canola	nucleus	29.42	20.55

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.1	Gene3D:3.30.710.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:BTB/POZ_dom	EnsemblPlants:CDX78955	ProteinID:CDX78955	ProteinID:CDX78955.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00131456001	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
InterPro:NPR1/NIM1-like_C	InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900	PFAM:PF12313	PFAM:PF12796
PFscan:PS50088	PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF124	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695	UniPathway:UPA00143	UniParc:UPI0004EE0245
SEG:seg	:	:	:	:	:

Description

BnaA01g10220D

Coordinates

chrLK031816:-:1030311..1032885

Molecular Weight (calculated)

66275.1 Da

IEP (calculated)

6.457

GRAVY (calculated)

-0.415

Length

588 amino acids

Sequence
(BLAST)

001: MAAATAMEPS SSISFTSSHL SNPSVVTNHQ SPSPNLEAAS LAKLSTDLEQ LLTSSDCDYT DAEITFEGET RAVGVHRCLL AARSKFFLDL FKKDRGSEEE
101: KKKPKYHIKD LLPHGHVGRE AFLHFLNYIY TGKLKPFPVE VSTCVDTGCV HDSCKPAIDF AVELMYASYT FKITELVSSF QRRLCNYVEK SLVENVLPIL
201: LVAFHCDLTQ LLDQCIERVA RSDLDRFYIE KELPLEVSEK IKKLRVKSMN TDEVADKLIE RTGKVLKALD SDDVELVKLL LTESDTTLDQ ANGLHYVVAY
301: SDPKVVAEVL ALDMADVNYR NSRGYTVLHY AAMRREPSII ISLLKKGANA SDFTFDGRSA VNICRRMTRP KDYYTKNAKG DEASKDRLCI DILEREIRRN
401: PLASGGGDAP TCSHSMPEDL QMRLLYLEKR VGLAQLFFPT EADVAMDIAN VEGTSEFTGF PVPPPSNGAT GNLTQVDLNE TPYMQTKRLL TRMEALMKTV
501: ETGRRYFPSC SEVLDKYMDD YMDEDIPDMS HPERGSVKER RWKRMRYKEL KNDVKKAYNK DKQAKIARSC LSVSSPDSSL RGSLENQT

Best Arabidopsis Sequence Match ( AT4G19660.1 )
(BLAST)

001: MAATAIEPSS SISFTSSHLS NPSPVVTTYH SAANLEELSS NLEQLLTNPD CDYTDAEIII EEEANPVSVH RCVLAARSKF FLDLFKKDKD SSEKKPKYQM
101: KDLLPYGNVG REAFLHFLSY IYTGRLKPFP IEVSTCVDSV CAHDSCKPAI DFAVELMYAS FVFQIPDLVS SFQRKLRNYV EKSLVENVLP ILLVAFHCDL
201: TQLLDQCIER VARSDLDRFC IEKELPLEVL EKIKQLRVKS VNIPEVEDKS IERTGKVLKA LDSDDVELVK LLLTESDITL DQANGLHYAV AYSDPKVVTQ
301: VLDLDMADVN FRNSRGYTVL HIAAMRREPT IIIPLIQKGA NASDFTFDGR SAVNICRRLT RPKDYHTKTS RKEPSKYRLC IDILEREIRR NPLVSGDTPT
401: CSHSMPEDLQ MRLLYLEKRV GLAQLFFPAE ANVAMDVANV EGTSECTGLL TPPPSNDTTE NLGKVDLNET PYVQTKRMLT RMKALMKTVE TGRRYFPSCY
501: EVLDKYMDQY MDEEIPDMSY PEKGTVKERR QKRMRYNELK NDVKKAYSKD KVARSCLSSS SPASSLREAL ENPT

Arabidopsis Description

NPR4NPR1-like protein 4 [Source:TAIR;Acc:AT4G19660]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.