CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89362	Canola	cytosol	95.21	95.21
AT4G26120.2	Thale cress	cytosol, plastid	71.41	71.88
CDY34413	Canola	cytosol	60.33	64.15
CDY25575	Canola	cytosol	59.67	63.33
CDY50004	Canola	cytosol	55.7	56.54
CDX89364	Canola	cytosol	55.87	55.59
CDX94376	Canola	cytosol	55.04	54.95
VIT_11s0016g01990.t01	Wine grape	cytosol	49.26	51.03
Solyc07g040690.2.1	Tomato	cytosol	47.93	50.35
KRH37416	Soybean	cytosol	46.78	48.63
GSMUA_Achr7P09190_001	Banana	cytosol	43.47	45.74
GSMUA_Achr2P16670_001	Banana	cytosol	43.97	45.55
Zm00001d039469_P001	Maize	cytosol	41.82	43.4
TraesCS3A01G105400.1	Wheat	cytosol	41.32	43.33
EES00131	Sorghum	cytosol	41.49	43.05
TraesCS3B01G123800.1	Wheat	cytosol	40.99	42.98
Os01t0194300-01	Rice	cytosol	41.16	42.78
TraesCS3D01G107500.1	Wheat	cytosol	40.99	42.76
TraesCS7D01G019000.1	Wheat	cytosol, mitochondrion	34.38	42.71
GSMUA_Achr6P00950_001	Banana	nucleus	44.13	42.38
TraesCS4A01G470500.1	Wheat	cytosol	34.05	42.13
HORVU3Hr1G019230.6	Barley	cytosol	41.16	41.64
GSMUA_AchrUn_...	Banana	cytosol	39.5	41.57
GSMUA_Achr3P25880_001	Banana	cytosol	38.02	40.49
GSMUA_Achr8P05490_001	Banana	cytosol	38.68	40.28
TraesCS7A01G021800.1	Wheat	cytosol, plastid	34.55	37.39
CDY26398	Canola	plastid	33.39	35.94
CDY39410	Canola	plastid	32.07	35.53
CDX82577	Canola	plastid	31.74	35.42
CDX78955	Canola	plastid	33.88	34.86
CDX99350	Canola	plastid	33.88	34.86
CDY14314	Canola	nucleus	44.3	31.83
CDY36698	Canola	cytosol	22.81	27.11
CDY35774	Canola	cytosol	12.56	26.12
CDX76040	Canola	cytosol	12.4	25.77
CDY30971	Canola	cytosol	18.68	24.84
CDY06130	Canola	cytosol	18.68	24.46
CDX72067	Canola	cytosol	18.51	24.19
CDX67678	Canola	cytosol, endoplasmic reticulum, plastid	18.02	23.59
CDX79940	Canola	cytosol	12.07	23.03
CDY23854	Canola	cytosol	17.69	22.25
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	17.69	21.97
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	17.69	21.97
CDY33841	Canola	cytosol	2.64	16.16
TraesCS7A01G022800.1	Wheat	cytosol	37.36	15.1

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.2	MapMan:26.8.3.1.1	Gene3D:3.30.710.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	EnsemblPlants:CDX94371	ProteinID:CDX94371	ProteinID:CDX94371.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00157490001	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	InterPro:NPR1/NIM1-like_C	PFAM:PF00651	PFAM:PF12313	PFAM:PF13857	PFscan:PS50088
PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF124	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695	UniPathway:UPA00143	UniParc:UPI0004EC4037	SEG:seg

Description

BnaC01g18130D

Coordinates

chrLK031881:-:554371..557033

Molecular Weight (calculated)

67997.8 Da

IEP (calculated)

6.255

GRAVY (calculated)

-0.230

Length

605 amino acids

Sequence
(BLAST)

001: MATIAGLSGS YEITNGYSFI AESSIDNPAA EFLTSPEFSA LQLLSTCLES VFDSPETFYS DAKLILSDGR EISFHRCVLS ARIPVFKNAL ASAVKDRKPA
101: AVVKLELKEI ARDYDVGFDS VATVLAYVYS GRVRPPRKGA SDCVDDGCCH VACRPAVEFL MELLYLAYVF EIPELVSLYE RQFLNIIDNI VIEDILVIFK
201: LANICGEAYK KLLDRCVEII AKSDIEIVTL DKSLPQDIVK RVTDIRKELG LEPPEPDKHV MNIYKALDSD DVELVKMLLT EGHTSLDDAY ALHYAVAHSD
301: VKTASDLIDI ELADVDHRNP RGYTALHVAA MRNEPKLMVY LLTKGANASE TTFDGRTALV IAKRLTKASE YNASTEQGKP SLKGGLCIEV LEHACKLGRL
401: PRDELPSLPA TPDELRMRLL YLENRVALAR ILFPVEAQVV MDIVKLEGTC EFTASSLDPD QHSGAKRTSL DLNIAPFVIR EEHLCRLIAL TNTVKLGKRY
501: FPRCSLDHFM DSEDLNHLAC VEEDTPEKRL QKKQRYMELQ ETVMKTFSEE KDDSGKSSKT RSVRSNGKLS HRRLRVDKRD LEKRLCRNRK GDSRIEKHVT
601: FQARN

Best Arabidopsis Sequence Match ( AT4G26120.2 )
(BLAST)

001: MMATTTTTTT ARFSDSYEFS NTSGNSFFAA ESSLDYPTEF LTPPEVSALK LLSNCLESVF DSPETFYSDA KLVLAGGREV SFHRCILSAR IPVFKSALAT
101: VKEQKSSTTV KLQLKEIARD YEVGFDSVVA VLAYVYSGRV RSPPKGASAC VDDDCCHVAC RSKVDFMVEV LYLSFVFQIQ ELVTLYERQF LEIVDKVVVE
201: DILVIFKLDT LCGTTYKKLL DRCIEIIVKS DIELVSLEKS LPQHIFKQII DIREALCLEP PKLERHVKNI YKALDSDDVE LVKMLLLEGH TNLDEAYALH
301: FAIAHCAVKT AYDLLELELA DVNLRNPRGY TVLHVAAMRK EPKLIISLLM KGANILDTTL DGRTALVIVK RLTKADDYKT STEDGTPSLK GGLCIEVLEH
401: EQKLEYLSPI EASLSLPVTP EELRMRLLYY ENRVALARLL FPVETETVQG IAKLEETCEF TASSLEPDHH IGEKRTSLDL NMAPFQIHEK HLSRLRALCK
501: TVELGKRYFK RCSLDHFMDT EDLNHLASVE EDTPEKRLQK KQRYMELQET LMKTFSEDKE ECGKSSTPKP TSAVRSNRKL SHRRLKVDKR DFLKRPYGNG
601: D

Arabidopsis Description

Ankyrin repeat family protein / BTB/POZ domain-containing protein [Source:TAIR;Acc:AT4G26120]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.