Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G41370.1 | CDX73744 | AT3G51180.1 | 21798944 |
| AT2G41370.1 | CDX77980 | AT3G51180.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004617.1-P | Field mustard | cytosol | 99.68 | 99.68 |
| CDX76040 | Canola | cytosol | 74.45 | 81.1 |
| CDY35774 | Canola | cytosol | 73.5 | 80.07 |
| Os01t0948900-01 | Rice | cytosol | 70.98 | 66.77 |
| CDY23854 | Canola | cytosol | 97.16 | 64.03 |
| CDY14765 | Canola | cytosol, endoplasmic reticulum, plastid | 95.58 | 62.22 |
| AT2G41370.1 | Thale cress | cytosol | 95.9 | 61.91 |
| CDY06929 | Canola | cytosol, endoplasmic reticulum, plastid | 94.64 | 61.6 |
| Solyc05g018160.1.1 | Tomato | cytosol | 53.0 | 60.0 |
| Os12t0138500-01 | Rice | cytosol | 58.04 | 56.62 |
| GSMUA_Achr5P08160_001 | Banana | cytosol | 74.13 | 55.04 |
| GSMUA_AchrUn_... | Banana | cytosol | 72.24 | 54.65 |
| GSMUA_Achr3P08710_001 | Banana | cytosol | 72.24 | 53.76 |
| GSMUA_Achr11P... | Banana | cytosol | 72.87 | 53.47 |
| VIT_08s0007g05740.t01 | Wine grape | cytosol | 82.33 | 53.27 |
| CDX67678 | Canola | cytosol, endoplasmic reticulum, plastid | 77.6 | 53.25 |
| CDY06130 | Canola | cytosol | 76.97 | 52.81 |
| CDX72067 | Canola | cytosol | 76.97 | 52.7 |
| PGSC0003DMT400027591 | Potato | cytosol | 76.34 | 52.49 |
| KRH66789 | Soybean | cytosol | 80.44 | 52.36 |
| Solyc04g040220.2.1 | Tomato | cytosol | 76.34 | 51.93 |
| KRH72058 | Soybean | cytosol | 77.6 | 51.68 |
| GSMUA_Achr8P22070_001 | Banana | cytosol | 67.51 | 51.57 |
| PGSC0003DMT400076710 | Potato | cytosol | 77.92 | 50.72 |
| CDY30971 | Canola | cytosol | 72.56 | 50.55 |
| PGSC0003DMT400021076 | Potato | cytosol | 77.29 | 50.0 |
| Solyc10g079750.1.1 | Tomato | cytosol | 76.66 | 49.8 |
| Solyc10g079460.1.1 | Tomato | cytosol | 77.29 | 49.6 |
| CDY33841 | Canola | cytosol | 15.46 | 49.49 |
| GSMUA_AchrUn_... | Banana | cytosol | 68.45 | 48.44 |
| GSMUA_Achr5P16220_001 | Banana | cytosol | 65.93 | 47.39 |
| Zm00001d011878_P001 | Maize | cytosol | 69.72 | 45.1 |
| OQU88196 | Sorghum | cytosol | 70.66 | 44.18 |
| Zm00001d042111_P001 | Maize | cytosol | 70.35 | 43.9 |
| TraesCS3D01G484100.1 | Wheat | cytosol | 70.35 | 43.64 |
| HORVU3Hr1G106880.5 | Barley | cytosol | 70.35 | 43.47 |
| TraesCS3A01G489000.1 | Wheat | cytosol | 70.35 | 43.39 |
| TraesCS3B01G537400.1 | Wheat | cytosol | 70.35 | 43.39 |
| EES16520 | Sorghum | cytosol | 57.73 | 38.12 |
| Zm00001d023246_P001 | Maize | cytosol | 57.1 | 38.11 |
| Zm00001d052468_P002 | Maize | cytosol | 56.47 | 38.0 |
| Os11t0141900-00 | Rice | cytosol | 58.04 | 37.25 |
| EES09234 | Sorghum | cytosol | 56.78 | 37.19 |
| Zm00001d004966_P001 | Maize | cytosol | 55.2 | 37.0 |
| TraesCS5A01G134700.2 | Wheat | cytosol | 57.41 | 36.92 |
| TraesCS5B01G133700.1 | Wheat | cytosol | 57.41 | 36.92 |
| TraesCS5D01G139600.1 | Wheat | cytosol | 57.41 | 36.92 |
| CDX78955 | Canola | plastid | 26.81 | 14.46 |
| CDX99350 | Canola | plastid | 26.81 | 14.46 |
| CDY26398 | Canola | plastid | 25.55 | 14.41 |
| CDY34413 | Canola | cytosol | 24.92 | 13.88 |
| CDY39410 | Canola | plastid | 23.03 | 13.37 |
| CDY25575 | Canola | cytosol | 23.97 | 13.33 |
| CDX82577 | Canola | plastid | 22.4 | 13.1 |
| CDX89362 | Canola | cytosol | 23.34 | 12.23 |
| CDX94371 | Canola | cytosol | 23.03 | 12.07 |
| CDX94376 | Canola | cytosol | 22.71 | 11.88 |
| CDX89364 | Canola | cytosol | 22.71 | 11.84 |
| CDY50004 | Canola | cytosol | 21.77 | 11.58 |
| CDY36698 | Canola | cytosol | 14.51 | 9.04 |
| CDY14314 | Canola | nucleus | 21.77 | 8.19 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | EnsemblPlants:CDX79940 |
| ProteinID:CDX79940 | ProteinID:CDX79940.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00132799001 |
| InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:NPR_central_dom | PFAM:PF11900 | PFAM:PF12796 |
| PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF116 | SMART:SM00248 | SUPFAM:SSF48403 |
| UniPathway:UPA00143 | UniParc:UPI0004EDB2B1 | SEG:seg | : | : | : |
Description
BnaA05g02160D
Coordinates
chrLK031819:+:945261..946214
Molecular Weight (calculated)
35176.0 Da
IEP (calculated)
6.678
GRAVY (calculated)
-0.425
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEKASIEDV MKVLIASRKQ DMHQLWTTCS HLVAKSGLPP EILAKHLTID VVAKIEELRL KSSIARRSLM PHHHHHDLTV AQDLEDQKIR RMRRALDSSD
101: VELVKLMVMG EGLNLDESLA LHYAVESCSR EVVKALLELG AADVNYPAGP AGKTPLHIAA EMVSPDMVAV LLDHHADPNV RTVGGITPLD ILRTLTSDFL
201: FKGAVPGLTH IEPNKLRLCL ELVQSAAMVI SREEGNNSNN NDHNNAIYPQ MNDERNSGSS GGSNNNLDSR FVYLNLGAGQ MGPGRDHGDD HNSQREGMSR
301: HHHDPSTMYH HHHQHHF
101: VELVKLMVMG EGLNLDESLA LHYAVESCSR EVVKALLELG AADVNYPAGP AGKTPLHIAA EMVSPDMVAV LLDHHADPNV RTVGGITPLD ILRTLTSDFL
201: FKGAVPGLTH IEPNKLRLCL ELVQSAAMVI SREEGNNSNN NDHNNAIYPQ MNDERNSGSS GGSNNNLDSR FVYLNLGAGQ MGPGRDHGDD HNSQREGMSR
301: HHHDPSTMYH HHHQHHF
001: MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGYEVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F
Arabidopsis Description
NPR5Regulatory protein NPR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.