Factsheet for Os01t0948900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0663200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41370.1	Os04t0663200-01	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79940	Canola	cytosol	66.77	70.98
Bra004617.1-P	Field mustard	cytosol	66.47	70.66
Bra014645.1-P	Field mustard	cytosol	57.86	67.01
CDX76040	Canola	cytosol	57.86	67.01
CDY35774	Canola	cytosol	56.97	65.98
Zm00001d011878_P001	Maize	cytosol	89.32	61.43
OQU88196	Sorghum	cytosol	91.1	60.55
GSMUA_Achr11P...	Banana	cytosol	77.45	60.42
Os12t0138500-01	Rice	cytosol	57.86	60.0
Zm00001d042111_P001	Maize	cytosol	90.21	59.84
TraesCS3D01G484100.1	Wheat	cytosol	84.87	55.97
TraesCS3A01G489000.1	Wheat	cytosol	85.16	55.84
TraesCS3B01G537400.1	Wheat	cytosol	85.16	55.84
HORVU3Hr1G106880.5	Barley	cytosol	84.87	55.75
Solyc05g018160.1.1	Tomato	cytosol	45.7	55.0
GSMUA_Achr5P16220_001	Banana	cytosol	67.06	51.25
VIT_08s0007g05740.t01	Wine grape	cytosol	71.22	48.98
CDY33841	Canola	cytosol	14.24	48.48
PGSC0003DMT400027591	Potato	cytosol	65.58	47.94
Solyc04g040220.2.1	Tomato	cytosol	66.17	47.85
CDY23854	Canola	cytosol	68.25	47.82
KRH72058	Soybean	cytosol	67.06	47.48
AT2G41370.1	Thale cress	cytosol	69.14	47.45
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	68.55	47.43
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	68.55	47.43
KRH66789	Soybean	cytosol	68.25	47.23
PGSC0003DMT400076710	Potato	cytosol	67.95	47.02
Bra016938.1-P	Field mustard	cytosol	67.36	46.61
AT3G57130.1	Thale cress	cytosol	64.39	46.47
Solyc10g079750.1.1	Tomato	cytosol	67.06	46.31
PGSC0003DMT400021076	Potato	cytosol	66.77	45.92
Solyc10g079460.1.1	Tomato	cytosol	66.77	45.55
CDX72067	Canola	cytosol	61.72	44.92
Bra007306.1-P	Field mustard	cytosol	61.42	44.81
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	61.42	44.81
CDY06130	Canola	cytosol	61.13	44.59
CDX67678	Canola	cytosol, endoplasmic reticulum, plastid	60.83	44.37
CDY30971	Canola	cytosol	57.86	42.86
Os11t0141900-00	Rice	cytosol	59.35	40.49
Os01t0194300-01	Rice	cytosol	26.11	15.12
Os03t0667100-01	Rice	cytosol	24.63	14.09
Os01t0767900-01	Rice	plastid	26.11	13.86

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	InterPro:NPR_central_dom
EnsemblPlantsGene:Os01g0948900	EnsemblPlants:Os01t0948900-01	PFAM:PF11900	PFAM:PF12796	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR24413	PANTHER:PTHR24413:SF116	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0000DD8EC5	SEG:seg

Description

NPR1-like gene 5Ankyrin repeat containing protein. (Os01t0948900-01);Ankyrin repeat containing protein. (Os01t0948900-02)

Coordinates

chr1:-:41741395..41743499

Molecular Weight (calculated)

35845.2 Da

IEP (calculated)

6.319

GRAVY (calculated)

-0.074

Length

337 amino acids

Sequence
(BLAST)

001: MCVDGCVQKQ LAGMVEKASI EDVMKVLMAS RKQDLHQLWT TCSHLVAKSG LPPEVLAKHL PIDVVAKIDE LRLKSMSRRS PFLSHHHHHP HAAAAGIEAS
101: SAAELDDHHK IRRMRRALDS SDVELVKLMV MGEGLNLDDA LALHYAVENC SREVVKALLE LGAADVNHPA GPAGKTPLHV AAEMVCPDMV AVLLDHHADP
201: NVRTVDGVTP LDILRTLTSD FLFKGAVPGL AHIEPNKLRL CLELVQSAAM VMSREDAQTA AVNAAPIYGE SPGGGGGGGV YNASGTSSSM VNLSLDNRMV
301: YLNLGMDAQF GKMNDGGDGD DGGSRGPSSL FSPHGFP

Best Arabidopsis Sequence Match ( AT2G41370.1 )
(BLAST)

001: MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGYEVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F

Arabidopsis Description

NPR5Regulatory protein NPR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.