Factsheet for GSMUA_Achr5P16220_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P19920_001
GSMUA_Achr3P11230_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41370.1	GSMUA_Achr1P19920_001	AT3G51180.1	21798944
AT2G41370.1	GSMUA_Achr3P11230_001	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	72.79	74.31
PGSC0003DMT400027591	Potato	cytosol	74.15	70.93
GSMUA_AchrUn_...	Banana	cytosol	67.12	70.64
Solyc04g040220.2.1	Tomato	cytosol	74.15	70.17
KRH66789	Soybean	cytosol	76.87	69.61
GSMUA_Achr5P08160_001	Banana	cytosol	67.35	69.56
GSMUA_Achr3P08710_001	Banana	cytosol	66.89	69.25
KRH72058	Soybean	cytosol	74.38	68.91
VIT_08s0007g05740.t01	Wine grape	cytosol	76.42	68.78
GSMUA_Achr8P22070_001	Banana	cytosol	63.72	67.71
AT3G57130.1	Thale cress	cytosol	71.66	67.67
CDY23854	Canola	cytosol	73.24	67.15
Zm00001d011878_P001	Maize	cytosol	74.6	67.14
Os01t0948900-01	Rice	cytosol	51.25	67.06
Bra007306.1-P	Field mustard	cytosol	69.61	66.45
CDX72067	Canola	cytosol	69.61	66.31
CDY06130	Canola	cytosol	69.39	66.23
AT2G41370.1	Thale cress	cytosol	73.7	66.19
Solyc10g079750.1.1	Tomato	cytosol	73.24	66.19
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	73.02	66.12
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	73.02	66.12
PGSC0003DMT400076710	Potato	cytosol	73.02	66.12
CDX79940	Canola	cytosol	47.39	65.93
OQU88196	Sorghum	cytosol	75.74	65.88
Bra004617.1-P	Field mustard	cytosol	47.17	65.62
CDX67678	Canola	cytosol, endoplasmic reticulum, plastid	68.48	65.37
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	68.48	65.37
Bra016938.1-P	Field mustard	cytosol	71.88	65.09
Zm00001d042111_P001	Maize	cytosol	74.83	64.96
PGSC0003DMT400021076	Potato	cytosol	72.11	64.9
TraesCS3D01G484100.1	Wheat	cytosol	75.06	64.77
TraesCS3B01G537400.1	Wheat	cytosol	75.06	64.4
TraesCS3A01G489000.1	Wheat	cytosol	75.06	64.4
CDY30971	Canola	cytosol	66.44	64.4
HORVU3Hr1G106880.5	Barley	cytosol	74.6	64.13
Solyc10g079460.1.1	Tomato	cytosol	71.66	63.97
Bra014645.1-P	Field mustard	cytosol	41.95	63.57
CDX76040	Canola	cytosol	41.95	63.57
CDY35774	Canola	cytosol	41.27	62.54
GSMUA_AchrUn_...	Banana	cytosol	62.13	61.16
Solyc05g018160.1.1	Tomato	cytosol	31.97	50.36
CDY33841	Canola	cytosol	9.75	43.43
GSMUA_Achr5P02120_001	Banana	cytosol	29.93	22.6
GSMUA_Achr8P05490_001	Banana	cytosol	29.71	22.55
GSMUA_Achr2P16670_001	Banana	cytosol	29.02	21.92
GSMUA_Achr4P32060_001	Banana	cytosol, plastid	29.48	21.85
GSMUA_Achr3P25880_001	Banana	cytosol	27.66	21.48
GSMUA_Achr6P00950_001	Banana	nucleus	29.25	20.48
GSMUA_Achr7P09190_001	Banana	cytosol	26.53	20.35
GSMUA_AchrUn_...	Banana	cytosol	26.08	20.0

Protein Annotations

Gene3D:1.25.40.20	MapMan:15.5.4.7.2	Gene3D:3.30.710.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr5G16220_001	EnsemblPlants:GSMUA_Achr5P16220_001
EnsemblPlants:GSMUA_Achr5T16220_001	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:M0SZ01
InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900	PFAM:PF12796	PFscan:PS50088	PFscan:PS50097
PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF116	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI00029531E6	SEG:seg	:	:

Description

Putative Regulatory protein NPR1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G16220_001]

Coordinates

chr5:+:13653041..13655162

Molecular Weight (calculated)

48277.5 Da

IEP (calculated)

7.023

GRAVY (calculated)

-0.022

Length

441 amino acids

Sequence
(BLAST)

001: MEESLKSLSL DYLNLLINGQ AFSDVTFSVE GRLVHAHRCV LAARSLFFRK FFCGAEPSSP SGLLLLNPHD RHSPRVIPVN YVSYEVFLLM LQFMYSGQVP
101: LVPQKHEPRP SCSDRGCWHT HCTAAVDLTL DTLAAARSFG IEQLALLTQK QLASMVEKAT IEDVMKVLIA SRKQDMNQLW ITCSHLVAKS GIPPEVLAKH
201: LPIDIVAKIE ELRLKSSLTG RSFITHHHSL EAAGASTELE DHHKIRRMRR ALDSSDVELV KLMVMGEGLN LDDALALHYA VENCTREVVK ALLELGATDV
301: NFRAGPAGKT PLHIAAKMVC PDMVAVLLDH HADPNIRTFD GVTPLDILRN LTSDFLFKGA VPGLTHIEPN KLRLCLELVQ SAALVMSRED AKSGGGGNHP
401: HSAIYPPMNQ QESNTCNANH TSGGGVGNIG LSSMFSSHGF P

Best Arabidopsis Sequence Match ( AT2G41370.1 )
(BLAST)

001: MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGYEVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F

Arabidopsis Description

NPR5Regulatory protein NPR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.