CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES13033

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41370.1	EES13033	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011878_P001	Maize	cytosol	91.72	94.9
Zm00001d042111_P001	Maize	cytosol	94.67	94.49
Os01t0948900-01	Rice	cytosol	60.55	91.1
TraesCS3D01G484100.1	Wheat	cytosol	86.39	85.71
TraesCS3A01G489000.1	Wheat	cytosol	86.59	85.41
TraesCS3B01G537400.1	Wheat	cytosol	86.39	85.21
HORVU3Hr1G106880.5	Barley	cytosol	86.0	84.99
GSMUA_Achr5P16220_001	Banana	cytosol	65.88	75.74
GSMUA_Achr11P...	Banana	cytosol	63.71	74.77
VIT_08s0007g05740.t01	Wine grape	cytosol	71.01	73.47
KRH72058	Soybean	cytosol	67.85	72.27
PGSC0003DMT400027591	Potato	cytosol	65.68	72.23
Solyc04g040220.2.1	Tomato	cytosol	66.08	71.89
CDY23854	Canola	cytosol	67.06	70.69
CDX79940	Canola	cytosol	44.18	70.66
Bra004617.1-P	Field mustard	cytosol	43.98	70.35
KRH66789	Soybean	cytosol	67.46	70.23
AT2G41370.1	Thale cress	cytosol	67.85	70.06
PGSC0003DMT400076710	Potato	cytosol	67.26	70.02
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	67.06	69.82
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	67.06	69.82
PGSC0003DMT400021076	Potato	cytosol	67.26	69.59
Solyc10g079750.1.1	Tomato	cytosol	66.67	69.26
Solyc10g079460.1.1	Tomato	cytosol	67.46	69.23
Bra016938.1-P	Field mustard	cytosol	66.08	68.79
AT3G57130.1	Thale cress	cytosol	63.12	68.52
Bra007306.1-P	Field mustard	cytosol	61.74	67.75
CDX72067	Canola	cytosol	61.74	67.6
CDY06130	Canola	cytosol	61.54	67.53
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	60.95	66.88
CDX76040	Canola	cytosol	38.26	66.67
Bra014645.1-P	Field mustard	cytosol	38.26	66.67
CDX67678	Canola	cytosol, endoplasmic reticulum, plastid	60.35	66.23
CDY35774	Canola	cytosol	37.67	65.64
CDY30971	Canola	cytosol	58.58	65.27
EES16520	Sorghum	cytosol	59.76	63.12
EES09234	Sorghum	cytosol	59.76	62.6
Solyc05g018160.1.1	Tomato	cytosol	30.37	55.0
CDY33841	Canola	cytosol	9.47	48.48
EES00131	Sorghum	cytosol	24.46	21.27
EES01524	Sorghum	plastid	25.64	20.93
EER91108	Sorghum	plastid	23.47	19.9

Protein Annotations

Gene3D:1.25.40.20	MapMan:15.5.4.7.2	Gene3D:3.30.710.10	UniProt:A0A1W0W1D8	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	InterPro:NPR_central_dom	EnsemblPlants:OQU88196	ProteinID:OQU88196
ProteinID:OQU88196.1	PFAM:PF00651	PFAM:PF11900	PFAM:PF12796	PFscan:PS50088	PFscan:PS50097
PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF116	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248
EnsemblPlantsGene:SORBI_3003G424950	SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI0009DC92FF	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:72878115..72882720

Molecular Weight (calculated)

53647.4 Da

IEP (calculated)

6.469

GRAVY (calculated)

0.030

Length

507 amino acids

Sequence
(BLAST)

001: MEDTLKSLSM DYLNLLINGP QAFSDVTFNV EGRLVHAHRC ILAARSLFFR KFFCGAATAD QAAAPGALLL DHLSPRSPSG ASSSSSPRGG GAGAAAAAAA
101: PGAVIPVNSV SYEVFLLLLQ FLYSGQVSLV PQKGEPRPGC GERACWHTHC AAAVDLALDT LAAARSFGVE ELALLTQKQL AAMVEKASIE DVMKVLMASR
201: KQDLHQLWTT CSHLVAKSGL PPEVLAKHLP IDVVAKIDEL RLKSSLSRRS PFLAHHHPYH PAAGGMEASS AADIDDHHKI RRMRRALDSS DVELVKLMVM
301: GEGLNLDEAL ALHYAVENCS REVVKALLEL GAADVNHPAG PAGKTPLHVA AEMVCPDMVA VLLDHHADPN VRTVEGVTPL DILRTLTSDF LFKGAVPGLA
401: HIEPNKLRLC LELVQSAAMV MSREDAHTAA AAVNAAPMYG EPSGGTVYNA SGTSSSMVNL SLDNRMVYLN LGMDAQFGKM GDGSDGDDGG SRGQGGPSSL
501: FSPHGYH

Best Arabidopsis Sequence Match ( AT2G41370.1 )
(BLAST)

001: MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGYEVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F

Arabidopsis Description

NPR5Regulatory protein NPR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.