CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES13033

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41370.1	EES13033	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052468_P002	Maize	cytosol	91.53	94.06
EES16520	Sorghum	cytosol	89.88	90.62
Os12t0138500-01	Rice	cytosol	58.47	87.08
Os11t0141900-00	Rice	cytosol	87.81	86.03
GSMUA_AchrUn_...	Banana	cytosol	55.17	63.72
GSMUA_Achr3P08710_001	Banana	cytosol	54.75	62.21
GSMUA_Achr5P08160_001	Banana	cytosol	54.55	61.83
GSMUA_Achr8P22070_001	Banana	cytosol	52.27	60.96
VIT_08s0007g05740.t01	Wine grape	cytosol	61.57	60.82
PGSC0003DMT400027591	Potato	cytosol	57.85	60.74
KRH72058	Soybean	cytosol	59.09	60.08
OQU88196	Sorghum	cytosol	62.6	59.76
CDY23854	Canola	cytosol	59.09	59.46
Solyc04g040220.2.1	Tomato	cytosol	57.02	59.23
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	59.3	58.93
KRH66789	Soybean	cytosol	59.09	58.73
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	59.09	58.73
AT3G57130.1	Thale cress	cytosol	56.2	58.24
AT2G41370.1	Thale cress	cytosol	58.88	58.04
Bra007306.1-P	Field mustard	cytosol	55.37	58.01
Bra016938.1-P	Field mustard	cytosol	58.26	57.91
CDY06130	Canola	cytosol	55.17	57.79
CDX72067	Canola	cytosol	55.17	57.67
PGSC0003DMT400076710	Potato	cytosol	57.44	57.08
Solyc10g079750.1.1	Tomato	cytosol	57.44	56.97
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	54.34	56.93
CDY30971	Canola	cytosol	53.51	56.92
Bra004617.1-P	Field mustard	cytosol	37.19	56.78
CDX79940	Canola	cytosol	37.19	56.78
CDX67678	Canola	cytosol, endoplasmic reticulum, plastid	54.13	56.71
PGSC0003DMT400021076	Potato	cytosol	56.82	56.12
GSMUA_AchrUn_...	Banana	cytosol	51.86	56.03
Solyc10g079460.1.1	Tomato	cytosol	56.82	55.67
Bra014645.1-P	Field mustard	cytosol	33.26	55.33
CDX76040	Canola	cytosol	33.26	55.33
CDY35774	Canola	cytosol	33.06	54.98
Solyc05g018160.1.1	Tomato	cytosol	24.79	42.86
CDY33841	Canola	cytosol	7.44	36.36
EER91108	Sorghum	plastid	25.21	20.4
EES01524	Sorghum	plastid	26.03	20.29
EES00131	Sorghum	cytosol	24.38	20.24

Protein Annotations

Gene3D:1.25.40.20	MapMan:15.5.4.7.2	Gene3D:3.30.710.10	EntrezGene:8085633	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	UniProt:C5Y471	EnsemblPlants:EES09234	ProteinID:EES09234	ProteinID:EES09234.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009605	GO:GO:0009607	GO:GO:0009719
GO:GO:0009864	GO:GO:0009987	GO:GO:0019005	GO:GO:0019538	GO:GO:0030162	GO:GO:0031625
GO:GO:0042787	GO:GO:0043161	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900	PFAM:PF12796	PFscan:PS50088	PFscan:PS50097
PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF113	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248
EnsemblPlantsGene:SORBI_3005G029700	SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI0001A867BF	RefSeq:XP_002450246.1	SEG:seg

Description

hypothetical protein

Coordinates

chr5:-:2631011..2641746

Molecular Weight (calculated)

50588.8 Da

IEP (calculated)

6.562

GRAVY (calculated)

0.048

Length

484 amino acids

Sequence
(BLAST)

001: MSSEDSLKSL SLDYLNLLIN GQAFSDVAFS VEGRLVHAHR CVLAARSLFF RKLFCGLDPN HQPPPPPPGS SAGRAAPPDL VIPVSSIRYE VLVLVLQFLY
101: SGQASVAAPK SGPLPGCGAR GCWHTRCGAA VDLALDTLAA ARSFGVEQLA LLVQKQLEAM VKEASVDDVM KVLMASRKFE MQELWATCSH LVARSGLSAD
201: LLAKHLPIDV VAKIEEIRAK SPAVVSPAGS GGGPRSPFLT HHYLPINAAS SAADRDHRIR RMRRALDAAD IELVKLMVMG EGLDLDDALA VHYAVQHCGR
301: DVVKALLELG AADVNSRAGP AGKTALHLAA EMVSPDMVSV LLDHHADPNA RTLDGVTPLD VLRSLTSEFL FKGAVPGLTH IEPNKLRLCL ELVQSAVMVA
401: TRDDGAGTGT GGGDTGGGGS DGGGSFPRGD AADDSLVSLT MNSTLMYQGQ DLAAAMAGGE ARKGSGGGGR GGSPSNLYFP NGFP

Best Arabidopsis Sequence Match ( AT2G41370.1 )
(BLAST)

001: MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGYEVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F

Arabidopsis Description

NPR5Regulatory protein NPR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.