CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014645.1-P	Field mustard	cytosol	99.66	99.66
CDY35774	Canola	cytosol	98.97	98.97
CDX79940	Canola	cytosol	81.1	74.45
CDY30971	Canola	cytosol	95.88	61.32
Os01t0948900-01	Rice	cytosol	67.01	57.86
AT3G57130.1	Thale cress	cytosol	89.35	55.67
CDX72067	Canola	cytosol	88.32	55.51
CDY06130	Canola	cytosol	87.97	55.41
CDX67678	Canola	cytosol, endoplasmic reticulum, plastid	86.25	54.33
Solyc05g018160.1.1	Tomato	cytosol	48.8	50.71
Os12t0138500-01	Rice	cytosol	55.67	49.85
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	80.41	48.05
CDY23854	Canola	cytosol	79.38	48.02
GSMUA_Achr5P08160_001	Banana	cytosol	70.1	47.78
GSMUA_AchrUn_...	Banana	cytosol	68.73	47.73
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	79.73	47.64
CDY33841	Canola	cytosol	16.15	47.47
GSMUA_Achr11P...	Banana	cytosol	70.1	47.22
GSMUA_Achr3P08710_001	Banana	cytosol	68.38	46.71
PGSC0003DMT400027591	Potato	cytosol	71.82	45.34
KRH66789	Soybean	cytosol	75.26	44.97
KRH72058	Soybean	cytosol	73.54	44.96
Solyc10g079460.1.1	Tomato	cytosol	76.29	44.94
PGSC0003DMT400021076	Potato	cytosol	75.6	44.9
Solyc04g040220.2.1	Tomato	cytosol	71.82	44.85
VIT_08s0007g05740.t01	Wine grape	cytosol	75.26	44.69
GSMUA_Achr8P22070_001	Banana	cytosol	63.57	44.58
PGSC0003DMT400076710	Potato	cytosol	71.13	42.51
Solyc10g079750.1.1	Tomato	cytosol	71.13	42.42
GSMUA_Achr5P16220_001	Banana	cytosol	63.57	41.95
GSMUA_AchrUn_...	Banana	cytosol	63.92	41.52
Zm00001d011878_P001	Maize	cytosol	65.64	38.98
TraesCS3D01G484100.1	Wheat	cytosol	68.04	38.75
HORVU3Hr1G106880.5	Barley	cytosol	68.04	38.6
TraesCS3B01G537400.1	Wheat	cytosol	68.04	38.52
TraesCS3A01G489000.1	Wheat	cytosol	67.7	38.33
OQU88196	Sorghum	cytosol	66.67	38.26
Zm00001d042111_P001	Maize	cytosol	65.98	37.8
EES16520	Sorghum	cytosol	56.36	34.17
Zm00001d023246_P001	Maize	cytosol	55.67	34.11
Zm00001d052468_P002	Maize	cytosol	54.64	33.76
EES09234	Sorghum	cytosol	55.33	33.26
Os11t0141900-00	Rice	cytosol	55.67	32.79
Zm00001d004966_P001	Maize	cytosol	53.26	32.77
TraesCS5A01G134700.2	Wheat	cytosol	54.98	32.45
TraesCS5B01G133700.1	Wheat	cytosol	54.98	32.45
TraesCS5D01G139600.1	Wheat	cytosol	54.98	32.45
CDY26398	Canola	plastid	25.77	13.35
CDY34413	Canola	cytosol	25.77	13.18
CDY25575	Canola	cytosol	24.74	12.63
CDX99350	Canola	plastid	25.43	12.59
CDX78955	Canola	plastid	25.43	12.59
CDX94371	Canola	cytosol	25.77	12.4
CDY50004	Canola	cytosol	25.09	12.25
CDX89362	Canola	cytosol	25.43	12.23
CDY39410	Canola	plastid	22.68	12.09
CDX82577	Canola	plastid	22.34	11.99
CDX89364	Canola	cytosol	24.74	11.84
CDX94376	Canola	cytosol	24.4	11.72
CDY14314	Canola	nucleus	24.74	8.55
CDY36698	Canola	cytosol	13.4	7.66

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDX76040
ProteinID:CDX76040	ProteinID:CDX76040.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00126270001
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	InterPro:NPR_central_dom	PFAM:PF11900	PFAM:PF12796
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF116	SMART:SM00248	SUPFAM:SSF48403
UniPathway:UPA00143	UniParc:UPI0004EF30D4	:	:	:	:

Description

BnaA04g03040D

Coordinates

chrLK031806:+:362562..363437

Molecular Weight (calculated)

32583.2 Da

IEP (calculated)

6.430

GRAVY (calculated)

-0.281

Length

291 amino acids

Sequence
(BLAST)

001: MVEKASIEDV MKVLIASRKH DMHQLWTTCS YLLTKSGLPT EILAKHLPIE LVAKVEDLRL KSSMPHQHDL TSALDLDDQK IRRMRRALDS SDVELVKLMV
101: MGEGLNLDES LALVYAVENC SREVVKALLE IGATDVNFQV GPTRKTALHI AAEMVSPDMV AVLLDHHADP NVQTVDGITP LDILRTLTSN FLFKGTIHGL
201: THTEPNKLRL CLELVQSAAL VISREEGNNN DNNMKEDHTS GSSLDSRLVY LNLGATNRDL GDGHGHQMEG MSLHHHHDPS TMYHYHHHRH F

Best Arabidopsis Sequence Match ( AT2G41370.1 )
(BLAST)

001: MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGYEVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F

Arabidopsis Description

NPR5Regulatory protein NPR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.