Factsheet for Zm00001d011878_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001952_P001
Zm00001d026536_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41370.1	Zm00001d001952_P001	AT3G51180.1	21798944
AT2G41370.1	Zm00001d026536_P002	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88196	Sorghum	cytosol	94.9	91.72
Zm00001d042111_P001	Maize	cytosol	94.08	90.75
Os01t0948900-01	Rice	cytosol	61.43	89.32
TraesCS3D01G484100.1	Wheat	cytosol	87.14	83.56
TraesCS3A01G489000.1	Wheat	cytosol	87.35	83.27
TraesCS3B01G537400.1	Wheat	cytosol	87.14	83.07
HORVU3Hr1G106880.5	Barley	cytosol	86.53	82.65
GSMUA_Achr5P16220_001	Banana	cytosol	67.14	74.6
GSMUA_Achr11P...	Banana	cytosol	65.71	74.54
VIT_08s0007g05740.t01	Wine grape	cytosol	71.63	71.63
Solyc04g040220.2.1	Tomato	cytosol	67.76	71.24
PGSC0003DMT400027591	Potato	cytosol	66.94	71.15
KRH72058	Soybean	cytosol	68.98	71.01
CDY23854	Canola	cytosol	68.78	70.06
AT2G41370.1	Thale cress	cytosol	70.0	69.86
PGSC0003DMT400076710	Potato	cytosol	69.39	69.82
CDX79940	Canola	cytosol	45.1	69.72
KRH66789	Soybean	cytosol	68.98	69.4
Bra004617.1-P	Field mustard	cytosol	44.9	69.4
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	68.78	69.2
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	68.78	69.2
Solyc10g079750.1.1	Tomato	cytosol	68.78	69.06
PGSC0003DMT400021076	Potato	cytosol	68.98	68.98
Solyc10g079460.1.1	Tomato	cytosol	68.98	68.42
Bra016938.1-P	Field mustard	cytosol	67.76	68.17
AT3G57130.1	Thale cress	cytosol	64.29	67.45
Bra007306.1-P	Field mustard	cytosol	62.86	66.67
CDX72067	Canola	cytosol	62.86	66.52
CDY06130	Canola	cytosol	62.65	66.45
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	62.04	65.8
CDX76040	Canola	cytosol	38.98	65.64
Bra014645.1-P	Field mustard	cytosol	38.98	65.64
CDX67678	Canola	cytosol, endoplasmic reticulum, plastid	61.84	65.58
CDY30971	Canola	cytosol	60.0	64.62
CDY35774	Canola	cytosol	38.37	64.6
Zm00001d023246_P001	Maize	cytosol	62.24	64.21
Zm00001d052468_P002	Maize	cytosol	61.43	63.91
Zm00001d004966_P001	Maize	cytosol	59.8	61.95
Solyc05g018160.1.1	Tomato	cytosol	31.63	55.36
CDY33841	Canola	cytosol	9.8	48.48
Zm00001d034944_P004	Maize	cytosol	23.06	24.84
Zm00001d012660_P002	Maize	cytosol	26.33	20.77
Zm00001d039469_P001	Maize	cytosol	24.49	20.58
Zm00001d013581_P001	Maize	cytosol	1.84	4.48

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100272726	MapMan:15.5.4.7.2	Gene3D:3.30.710.10	ProteinID:AQK98237.1	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	UniProt:B4FQ78	EMBL:BT039266	InterPro:BTB/POZ_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
EMBL:KJ727794	InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900	PFAM:PF12796	PFscan:PS50088
PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF116	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI00017B7B80	EnsemblPlantsGene:Zm00001d011878	EnsemblPlants:Zm00001d011878_P001
EnsemblPlants:Zm00001d011878_T001	SEG:seg	:	:	:	:

Description

Regulatory protein NPR5

Coordinates

chr8:+:163837344..163840402

Molecular Weight (calculated)

52173.9 Da

IEP (calculated)

6.540

GRAVY (calculated)

0.019

Length

490 amino acids

Sequence
(BLAST)

001: MEDTLKSLSM DYLNLLINGQ AFSDVTFNVE GRLVHAHRCI LAARSLFFRK FFCGAEQAAA GPGALLLDHL SPRSPSGTSS PRGASAAAPG AAVIPVNSVS
101: YEVFLLLLQF LYSGQVSLVP QKGEPRPGCG ERACWHTHCA AAVDLALDTL AAARSFGVEE LALLTQKQLA GMVEKASIED VMKVLMASRK QDLHQLWTTC
201: SHLVAKSGLP PEVLAKHLPM DVVSKIDELR LKSSLSRRSP FLAHHHHPAP GGGMEASSAA DIDDHHKIRR MRRALDSSDV ELVKLMVMGE GLNLDEALAL
301: HYAVENCSRE VVKALLELGA ADVNHTAGPA GKTPLHVAAE MVCPDMVAVL LDHHADPNVR TVEGVTPLDI LRTLTSDLLF KGAVPGLAHI EPNKLRLCLE
401: LVQSAAMVMS REDAHTAVNA APMYGEPSGG GGCGVYSASG TSSTSLVNLN LDNRMVYLNL GMDAQFGKMG DGDDGGGRGP SSLFSPHGYH

Best Arabidopsis Sequence Match ( AT2G41370.1 )
(BLAST)

001: MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGYEVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F

Arabidopsis Description

NPR5Regulatory protein NPR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.