Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76040 | Canola | cytosol | 47.47 | 16.15 |
| CDY35774 | Canola | cytosol | 46.46 | 15.81 |
| CDX79940 | Canola | cytosol | 49.49 | 15.46 |
| Solyc05g018160.1.1 | Tomato | cytosol | 41.41 | 14.64 |
| Os01t0948900-01 | Rice | cytosol | 48.48 | 14.24 |
| Os12t0138500-01 | Rice | cytosol | 37.37 | 11.38 |
| GSMUA_Achr11P... | Banana | cytosol | 48.48 | 11.11 |
| GSMUA_Achr5P08160_001 | Banana | cytosol | 45.45 | 10.54 |
| GSMUA_AchrUn_... | Banana | cytosol | 44.44 | 10.5 |
| CDX67678 | Canola | cytosol, endoplasmic reticulum, plastid | 48.48 | 10.39 |
| CDY06130 | Canola | cytosol | 48.48 | 10.39 |
| CDX72067 | Canola | cytosol | 48.48 | 10.37 |
| CDY30971 | Canola | cytosol | 47.47 | 10.33 |
| GSMUA_Achr3P08710_001 | Banana | cytosol | 44.44 | 10.33 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.46 | 10.27 |
| GSMUA_Achr8P22070_001 | Banana | cytosol | 42.42 | 10.12 |
| CDY23854 | Canola | cytosol | 48.48 | 9.98 |
| PGSC0003DMT400027591 | Potato | cytosol | 46.46 | 9.98 |
| Solyc10g079460.1.1 | Tomato | cytosol | 49.49 | 9.92 |
| Zm00001d011878_P001 | Maize | cytosol | 48.48 | 9.8 |
| GSMUA_Achr5P16220_001 | Banana | cytosol | 43.43 | 9.75 |
| Solyc04g040220.2.1 | Tomato | cytosol | 45.45 | 9.66 |
| CDY06929 | Canola | cytosol, endoplasmic reticulum, plastid | 47.47 | 9.65 |
| CDY14765 | Canola | cytosol, endoplasmic reticulum, plastid | 47.47 | 9.65 |
| PGSC0003DMT400021076 | Potato | cytosol | 47.47 | 9.59 |
| OQU88196 | Sorghum | cytosol | 48.48 | 9.47 |
| Zm00001d042111_P001 | Maize | cytosol | 48.48 | 9.45 |
| PGSC0003DMT400076710 | Potato | cytosol | 46.46 | 9.45 |
| Solyc10g079750.1.1 | Tomato | cytosol | 45.45 | 9.22 |
| TraesCS3A01G489000.1 | Wheat | cytosol | 46.46 | 8.95 |
| TraesCS3D01G484100.1 | Wheat | cytosol | 45.45 | 8.81 |
| HORVU3Hr1G106880.5 | Barley | cytosol | 45.45 | 8.77 |
| TraesCS3B01G537400.1 | Wheat | cytosol | 45.45 | 8.75 |
| Zm00001d023246_P001 | Maize | cytosol | 37.37 | 7.79 |
| EES16520 | Sorghum | cytosol | 37.37 | 7.71 |
| Zm00001d004966_P001 | Maize | cytosol | 36.36 | 7.61 |
| Os11t0141900-00 | Rice | cytosol | 37.37 | 7.49 |
| EES09234 | Sorghum | cytosol | 36.36 | 7.44 |
| Zm00001d052468_P002 | Maize | cytosol | 35.35 | 7.43 |
| TraesCS5A01G134700.2 | Wheat | cytosol | 36.36 | 7.3 |
| TraesCS5B01G133700.1 | Wheat | cytosol | 36.36 | 7.3 |
| TraesCS5D01G139600.1 | Wheat | cytosol | 36.36 | 7.3 |
| CDX78955 | Canola | plastid | 23.23 | 3.91 |
| CDX99350 | Canola | plastid | 23.23 | 3.91 |
| CDY34413 | Canola | cytosol | 22.22 | 3.87 |
| CDY39410 | Canola | plastid | 21.21 | 3.85 |
| CDY26398 | Canola | plastid | 21.21 | 3.74 |
| CDX82577 | Canola | plastid | 20.2 | 3.69 |
| CDY25575 | Canola | cytosol | 21.21 | 3.68 |
| CDY36698 | Canola | cytosol | 17.17 | 3.34 |
| CDX94376 | Canola | cytosol | 19.19 | 3.14 |
| CDX89364 | Canola | cytosol | 19.19 | 3.12 |
| CDX89362 | Canola | cytosol | 18.18 | 2.98 |
| CDY50004 | Canola | cytosol | 17.17 | 2.85 |
| CDX94371 | Canola | cytosol | 16.16 | 2.64 |
| CDY14314 | Canola | nucleus | 18.18 | 2.14 |
Protein Annotations
| EnsemblPlants:CDY33841 | EnsemblPlantsGene:GSBRNA2T00055312001 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF116 | ProteinID:CDY33841 | ProteinID:CDY33841.1 |
| UniParc:UPI0004EEDD0F | UniProt:A0A078H7K3 | MapMan:35.2 | : | : | : |
Description
BnaCnng07590DBnaCnng07590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7K3]
Coordinates
chrLK032322:-:419254..421997
Molecular Weight (calculated)
11508.1 Da
IEP (calculated)
9.870
GRAVY (calculated)
-0.085
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MVEKASIADV MKVLIASRKQ DMHQLWTTCS YLVAKSDLER SQERRCQSFV IEDLTNKHRT KTTCGVVSTW FLVFKSILKK HMIKFTSVTV SSYQYLLDV
001: MSNTFEESLK SMSLDYLNLL INGQAFSDVT FSVEGRLVHA HRCILAARSL FFRKFFCESD PSQPGAEPAN QTGSGARAAA VGGVIPVNSV GYEVFLLLLQ
101: FLYSGQVSIV PHKHEPRSNC GDRGCWHTHC TAAVDLSLDI LAAARYFGVE QLALLTQKHL TSMVEKASIE DVMKVLIASR KQDMHQLWTT CSYLIAKSGL
201: PQEILAKHLP IELVAKIEEL RLKSSMPLRS LMPHHHDLTS TLDLEDQKIR RMRRALDSSD VELVKLMVMG EGLNLDESLA LIYAVENCSR EVVKALLELG
301: AADVNYPAGP TGKTALHIAA EMVSPDMVAV LLDHHADPNV QTVDGITPLD ILRTLTSDFL FKGAIPGLTH IEPNKLRLCL ELVQSAALVI SREEGNNNSN
401: DNNTMIYPRM KDEHTSGSSL DSRLVYLNLG ATNRDIGDDN SNQREGMNLH HHHHDPSTMY HHHHHHF
101: FLYSGQVSIV PHKHEPRSNC GDRGCWHTHC TAAVDLSLDI LAAARYFGVE QLALLTQKHL TSMVEKASIE DVMKVLIASR KQDMHQLWTT CSYLIAKSGL
201: PQEILAKHLP IELVAKIEEL RLKSSMPLRS LMPHHHDLTS TLDLEDQKIR RMRRALDSSD VELVKLMVMG EGLNLDESLA LIYAVENCSR EVVKALLELG
301: AADVNYPAGP TGKTALHIAA EMVSPDMVAV LLDHHADPNV QTVDGITPLD ILRTLTSDFL FKGAIPGLTH IEPNKLRLCL ELVQSAALVI SREEGNNNSN
401: DNNTMIYPRM KDEHTSGSSL DSRLVYLNLG ATNRDIGDDN SNQREGMNLH HHHHDPSTMY HHHHHHF
Arabidopsis Description
NPR6Regulatory protein NPR6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1I7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.