CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76040	Canola	cytosol	98.97	98.97
Bra014645.1-P	Field mustard	cytosol	98.63	98.63
CDX79940	Canola	cytosol	80.07	73.5
CDY30971	Canola	cytosol	96.22	61.54
Os01t0948900-01	Rice	cytosol	65.98	56.97
AT3G57130.1	Thale cress	cytosol	88.32	55.03
CDX72067	Canola	cytosol	87.29	54.86
CDY06130	Canola	cytosol	86.94	54.76
CDX67678	Canola	cytosol, endoplasmic reticulum, plastid	85.22	53.68
Solyc05g018160.1.1	Tomato	cytosol	47.77	49.64
Os12t0138500-01	Rice	cytosol	55.33	49.54
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	79.38	47.43
CDY23854	Canola	cytosol	78.35	47.4
GSMUA_Achr5P08160_001	Banana	cytosol	69.07	47.07
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	78.69	47.02
GSMUA_AchrUn_...	Banana	cytosol	67.7	47.02
GSMUA_Achr11P...	Banana	cytosol	69.07	46.53
CDY33841	Canola	cytosol	15.81	46.46
GSMUA_Achr3P08710_001	Banana	cytosol	67.35	46.01
PGSC0003DMT400027591	Potato	cytosol	70.79	44.69
KRH66789	Soybean	cytosol	74.23	44.35
Solyc10g079460.1.1	Tomato	cytosol	75.26	44.33
KRH72058	Soybean	cytosol	72.51	44.33
PGSC0003DMT400021076	Potato	cytosol	74.57	44.29
Solyc04g040220.2.1	Tomato	cytosol	70.79	44.21
VIT_08s0007g05740.t01	Wine grape	cytosol	74.23	44.08
GSMUA_Achr8P22070_001	Banana	cytosol	62.54	43.86
PGSC0003DMT400076710	Potato	cytosol	70.1	41.89
Solyc10g079750.1.1	Tomato	cytosol	70.1	41.8
GSMUA_Achr5P16220_001	Banana	cytosol	62.54	41.27
GSMUA_AchrUn_...	Banana	cytosol	63.23	41.07
Zm00001d011878_P001	Maize	cytosol	64.6	38.37
TraesCS3D01G484100.1	Wheat	cytosol	67.01	38.16
HORVU3Hr1G106880.5	Barley	cytosol	67.01	38.01
TraesCS3B01G537400.1	Wheat	cytosol	67.01	37.94
TraesCS3A01G489000.1	Wheat	cytosol	66.67	37.74
OQU88196	Sorghum	cytosol	65.64	37.67
Zm00001d042111_P001	Maize	cytosol	64.95	37.2
EES16520	Sorghum	cytosol	56.01	33.96
Zm00001d023246_P001	Maize	cytosol	55.33	33.89
Zm00001d052468_P002	Maize	cytosol	54.3	33.55
EES09234	Sorghum	cytosol	54.98	33.06
Os11t0141900-00	Rice	cytosol	55.33	32.59
Zm00001d004966_P001	Maize	cytosol	52.92	32.56
TraesCS5D01G139600.1	Wheat	cytosol	54.64	32.25
TraesCS5B01G133700.1	Wheat	cytosol	54.64	32.25
TraesCS5A01G134700.2	Wheat	cytosol	54.64	32.25
CDY34413	Canola	cytosol	25.43	13.01
CDY26398	Canola	plastid	25.09	12.99
CDX94371	Canola	cytosol	26.12	12.56
CDY25575	Canola	cytosol	24.4	12.46
CDX78955	Canola	plastid	25.09	12.41
CDX99350	Canola	plastid	25.09	12.41
CDY50004	Canola	cytosol	24.74	12.08
CDX89362	Canola	cytosol	25.09	12.07
CDY39410	Canola	plastid	21.99	11.72
CDX89364	Canola	cytosol	24.4	11.68
CDX82577	Canola	plastid	21.65	11.62
CDX94376	Canola	cytosol	24.05	11.55
CDY14314	Canola	nucleus	24.4	8.43
CDY36698	Canola	cytosol	12.71	7.27

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	UniProt:A0A078HEA5	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
EnsemblPlants:CDY35774	ProteinID:CDY35774	ProteinID:CDY35774.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00059230001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	InterPro:NPR_central_dom	PFAM:PF11900
PFAM:PF12796	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF116	SMART:SM00248
SUPFAM:SSF48403	UniPathway:UPA00143	UniParc:UPI0004EE9061	:	:	:

Description

BnaC02g38200DBnaC02g38200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HEA5]

Coordinates

chrLK032360:+:135707..137791

Molecular Weight (calculated)

32615.1 Da

IEP (calculated)

6.506

GRAVY (calculated)

-0.302

Length

291 amino acids

Sequence
(BLAST)

001: MVENASIEDV MKVLIASRKH DMHQLWTTCS YLLTKSGLPT EILAKHLPIE LVAKVEDLRH KSSMPHQHDL TSALDLDDQK IRRMRRALDS SDVELVKLMV
101: MGEGLNLDES LALVYAVENC SREVVKALLE IGATDVNFQV GPTRKTALHI AAEMVSPDMV AVLLHHHADP NVQTVDGITP LDILRTLTSN FLFKGTIHGL
201: THTEPNKLRL CLELVQSAAL VISREEGNNN DNNMKEDHTS GSSLDSRLVY LNLGATNRDL GDGHGHQMEG MSLHHHHDPS TMYHYHHHRH F

Best Arabidopsis Sequence Match ( AT2G41370.1 )
(BLAST)

001: MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGYEVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F

Arabidopsis Description

NPR5Regulatory protein NPR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.