Factsheet for Os12t0138500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
endoplasmic reticulum 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0663200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41370.1	Os04t0663200-01	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0141900-00	Rice	cytosol	98.15	64.57
Zm00001d052468_P002	Maize	cytosol	87.69	60.51
TraesCS5D01G139600.1	Wheat	cytosol	89.54	59.03
TraesCS5B01G133700.1	Wheat	cytosol	89.54	59.03
TraesCS5A01G134700.2	Wheat	cytosol	89.54	59.03
EES09234	Sorghum	cytosol	87.08	58.47
Bra004617.1-P	Field mustard	cytosol	56.62	58.04
CDX79940	Canola	cytosol	56.62	58.04
Os01t0948900-01	Rice	cytosol	60.0	57.86
Bra014645.1-P	Field mustard	cytosol	49.85	55.67
CDX76040	Canola	cytosol	49.85	55.67
CDY35774	Canola	cytosol	49.54	55.33
GSMUA_AchrUn_...	Banana	cytosol	60.62	47.02
GSMUA_Achr5P08160_001	Banana	cytosol	61.23	46.6
GSMUA_Achr3P08710_001	Banana	cytosol	60.62	46.24
GSMUA_Achr8P22070_001	Banana	cytosol	56.62	44.34
Solyc05g018160.1.1	Tomato	cytosol	36.92	42.86
GSMUA_AchrUn_...	Banana	cytosol	56.92	41.29
KRH72058	Soybean	cytosol	58.15	39.71
VIT_08s0007g05740.t01	Wine grape	cytosol	59.69	39.59
PGSC0003DMT400027591	Potato	cytosol	55.69	39.26
CDY23854	Canola	cytosol	57.54	38.88
CDY14765	Canola	cytosol, endoplasmic reticulum, plastid	58.15	38.81
CDY06929	Canola	cytosol, endoplasmic reticulum, plastid	58.15	38.81
KRH66789	Soybean	cytosol	57.85	38.6
AT2G41370.1	Thale cress	cytosol	57.85	38.29
Bra016938.1-P	Field mustard	cytosol	57.23	38.19
Solyc04g040220.2.1	Tomato	cytosol	54.46	37.98
AT3G57130.1	Thale cress	cytosol	54.46	37.9
CDY06130	Canola	cytosol	53.85	37.88
Bra007306.1-P	Field mustard	cytosol	53.85	37.88
CDX72067	Canola	cytosol	53.85	37.8
CDY33841	Canola	cytosol	11.38	37.37
PGSC0003DMT400076710	Potato	cytosol	56.0	37.37
Solyc10g079750.1.1	Tomato	cytosol	56.0	37.3
CDX67678	Canola	cytosol, endoplasmic reticulum, plastid	52.62	37.01
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	52.62	37.01
CDY30971	Canola	cytosol	50.77	36.26
Solyc10g079460.1.1	Tomato	cytosol	55.08	36.23
PGSC0003DMT400021076	Potato	cytosol	54.15	35.92
Os01t0767900-01	Rice	plastid	26.15	13.39
Os01t0194300-01	Rice	cytosol	23.38	13.06
Os03t0667100-01	Rice	cytosol	23.08	12.73

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	InterPro:NPR_central_dom
EnsemblPlantsGene:Os12g0138500	EnsemblPlants:Os12t0138500-01	PFAM:PF11900	PFAM:PF12796	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR24413	PANTHER:PTHR24413:SF113	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0000DD9DA3	SEG:seg

Description

Similar to Ankyrin-repeat protein. (Os12t0138500-01)

Coordinates

chr12:+:1870710..1872237

Molecular Weight (calculated)

34673.7 Da

IEP (calculated)

5.793

GRAVY (calculated)

-0.090

Length

325 amino acids

Sequence
(BLAST)

001: GFLEIQPGKQ LESMVKEASV DDVMKVLMAS RKFEMQELWA TCSHLVARSG LSADLLAKHL PIDVVAKIEE IRAKSPLAAA AAPRSPFLTH HYLPMNPASS
101: AADRDNKIRR MRRALDAADI ELVKLMVMGE GLDLDDALAV HYAVQHCNRD VVKALLELGA ADVNSRAGPT GKTALHLAAE MVSPDMVSVL LDHHADPNSR
201: TLDGVTPLDV LRSLTSEFLF KGAVPGLTHI EPNKLRLCLE LVQSAVMVTT RDDGAPVTGG EAGGSDGGNF PRSDADDSLV SLTMNSTLMY QGQEMAAAVA
301: AGEGRKSNNG RGSPPPAMYF PNGFA

Best Arabidopsis Sequence Match ( AT2G41370.1 )
(BLAST)

001: MSNLEESLRS LSLDFLNLLI NGQAFSDVTF SVEGRLVHAH RCILAARSLF FRKFFCGTDS PQPVTGIDPT QHGSVPASPT RGSTAPAGII PVNSVGYEVF
101: LLLLQFLYSG QVSIVPQKHE PRPNCGERGC WHTHCSAAVD LALDTLAASR YFGVEQLALL TQKQLASMVE KASIEDVMKV LIASRKQDMH QLWTTCSHLV
201: AKSGLPPEIL AKHLPIDVVT KIEELRLKSS IARRSLMPHN HHHDLSVAQD LEDQKIRRMR RALDSSDVEL VKLMVMGEGL NLDESLALHY AVESCSREVV
301: KALLELGAAD VNYPAGPAGK TPLHIAAEMV SPDMVAVLLD HHADPNVRTV GGITPLDILR TLTSDFLFKG AVPGLTHIEP NKLRLCLELV QSAAMVISRE
401: EGNNSNNQNN DNNTGIYPHM NEEHNSGSSG GSNNNLDSRL VYLNLGAGTG QMGPGRDQGD DHNSQREGMS RHHHHHQDPS TMYHHHHQHH F

Arabidopsis Description

NPR5Regulatory protein NPR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.