Factsheet for Bra007306.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06130	Canola	cytosol	99.35	99.35
AT3G57130.1	Thale cress	cytosol	90.04	89.08
Bra014645.1-P	Field mustard	cytosol	55.84	88.66
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	85.28	85.28
Bra004617.1-P	Field mustard	cytosol	52.38	76.34
Bra016938.1-P	Field mustard	cytosol	76.62	72.69
PGSC0003DMT400027591	Potato	cytosol	72.51	72.67
VIT_08s0007g05740.t01	Wine grape	cytosol	76.62	72.24
Solyc04g040220.2.1	Tomato	cytosol	72.73	72.1
KRH72058	Soybean	cytosol	74.24	72.06
KRH66789	Soybean	cytosol	75.76	71.87
Bra004618.1-P	Field mustard	cytosol	27.71	70.33
GSMUA_Achr5P16220_001	Banana	cytosol	66.45	69.61
PGSC0003DMT400021076	Potato	cytosol	73.38	69.18
Solyc10g079460.1.1	Tomato	cytosol	73.81	69.03
PGSC0003DMT400076710	Potato	cytosol	72.29	68.58
GSMUA_AchrUn_...	Banana	cytosol	61.9	68.26
Solyc10g079750.1.1	Tomato	cytosol	71.64	67.83
GSMUA_Achr11P...	Banana	cytosol	62.34	66.67
GSMUA_Achr5P08160_001	Banana	cytosol	61.47	66.51
GSMUA_Achr3P08710_001	Banana	cytosol	61.26	66.43
GSMUA_Achr8P22070_001	Banana	cytosol	58.01	64.58
Zm00001d011878_P001	Maize	cytosol	66.67	62.86
OQU88196	Sorghum	cytosol	67.75	61.74
TraesCS3D01G484100.1	Wheat	cytosol	68.18	61.64
Os01t0948900-01	Rice	cytosol	44.81	61.42
Zm00001d042111_P001	Maize	cytosol	67.53	61.42
TraesCS3B01G537400.1	Wheat	cytosol	68.18	61.28
TraesCS3A01G489000.1	Wheat	cytosol	68.18	61.28
HORVU3Hr1G106880.5	Barley	cytosol	67.75	61.01
GSMUA_AchrUn_...	Banana	cytosol	56.71	58.48
EES16520	Sorghum	cytosol	59.31	57.08
Zm00001d023246_P001	Maize	cytosol	58.66	57.05
Zm00001d052468_P002	Maize	cytosol	57.58	56.48
Os11t0141900-00	Rice	cytosol	59.96	56.07
Zm00001d004966_P001	Maize	cytosol	56.71	55.39
EES09234	Sorghum	cytosol	58.01	55.37
TraesCS5A01G134700.2	Wheat	cytosol	58.87	55.17
TraesCS5B01G133700.1	Wheat	cytosol	58.87	55.17
TraesCS5D01G139600.1	Wheat	cytosol	58.87	55.17
Os12t0138500-01	Rice	cytosol	37.88	53.85
Solyc05g018160.1.1	Tomato	cytosol	31.17	51.43
Bra021949.1-P	Field mustard	plastid	26.84	22.06
Bra013416.1-P	Field mustard	plastid	27.27	21.43
Bra025093.1-P	Field mustard	plastid	24.46	20.7
Bra027690.1-P	Field mustard	cytosol, plastid	25.32	20.53
Bra013950.1-P	Field mustard	cytosol	24.89	19.86
Bra013952.1-P	Field mustard	cytosol	24.68	18.84
Bra010439.1-P	Field mustard	cytosol	24.03	11.54

Protein Annotations

Gene3D:1.25.40.20	MapMan:15.5.4.7.2	Gene3D:3.30.710.10	ProteinID:ACU32462	ProteinID:ACU32462.1	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra007306	EnsemblPlants:Bra007306.1	EnsemblPlants:Bra007306.1-P
UniProt:E6Y8B6	EMBL:FJ532056	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900
PFAM:PF12796	PFscan:PS50088	PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF116
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI0001F3467B
SEG:seg	:	:	:	:	:

Description

AT3G57130 (E=3e-216) BOP1 | BOP1 (BLADE ON PETIOLE 1); protein binding

Coordinates

chrA09:+:28499400..28501550

Molecular Weight (calculated)

51297.0 Da

IEP (calculated)

6.536

GRAVY (calculated)

-0.106

Length

462 amino acids

Sequence
(BLAST)

001: MKNQQEAMSS SIEESLKSMS LDYLNLLING QAFSDVTFNV EGRLVHAHRC ILAARSLFFR KFFCGSDPSQ TDPANQTGSG ARAAVVGGVI PVNSVGYEVF
101: LLLLQFLYSG QVSMVPHKHE PRSNCGDRGC WHTHCTAAVD LSLDILAAAR YFGVEQLALL TQKQLTSMVE KASIEDVMKV LIASRKHDMH QLWTTCSYLV
201: AKSGLPTEIL AKHLPIELVA KVEDLRLKSS MPLRSLMPHQ HDLTSALDLE DQKIRRMRRA LDSADVELVK LMVMGEGLNL DESLALVYAV ENCSREVVKA
301: LLELGAIDVN YPAGPTRKTA LHIASEMVSP DMVAVLLDHH ADPNVQTVDG ITPLDILRTL TSDFLFKGTV PGLTHVEPNK LRLCLELVQS AALVMSREEG
401: INNDNNTVMY PRLKDEHMSG SSLDSRLVYL NLGGEHGNQM EGMSLHHHHE PPTMYHHHHH HF

Best Arabidopsis Sequence Match ( AT3G57130.1 )
(BLAST)

001: MSNTFEESLK SMSLDYLNLL INGQAFSDVT FSVEGRLVHA HRCILAARSL FFRKFFCESD PSQPGAEPAN QTGSGARAAA VGGVIPVNSV GYEVFLLLLQ
101: FLYSGQVSIV PHKHEPRSNC GDRGCWHTHC TAAVDLSLDI LAAARYFGVE QLALLTQKHL TSMVEKASIE DVMKVLIASR KQDMHQLWTT CSYLIAKSGL
201: PQEILAKHLP IELVAKIEEL RLKSSMPLRS LMPHHHDLTS TLDLEDQKIR RMRRALDSSD VELVKLMVMG EGLNLDESLA LIYAVENCSR EVVKALLELG
301: AADVNYPAGP TGKTALHIAA EMVSPDMVAV LLDHHADPNV QTVDGITPLD ILRTLTSDFL FKGAIPGLTH IEPNKLRLCL ELVQSAALVI SREEGNNNSN
401: DNNTMIYPRM KDEHTSGSSL DSRLVYLNLG ATNRDIGDDN SNQREGMNLH HHHHDPSTMY HHHHHHF

Arabidopsis Description

NPR6Regulatory protein NPR6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1I7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.