Factsheet for Bra027690.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 2
endoplasmic reticulum 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra015646.1-P
Bra016291.1-P
Bra016389.1-P
Bra017343.1-P
Bra024680.1-P
Bra025169.1-P
Bra028713.1-P
Bra031364.1-P
Bra032601.1-P
Bra032760.1-P
Bra033654.1-P
Bra035336.1-P
Bra036362.1-P
Bra038444.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64280.1	Bra032601.1-P	AT1G02450.1	11442055
AT1G64280.1	Bra032601.1-P	AT1G02450.1	15749762
AT1G64280.1	Bra016389.1-P	AT1G22070.1	10659709
AT1G64280.1	Bra031364.1-P	AT1G22070.1	10659709
AT1G64280.1	Bra016389.1-P	AT1G22070.1	10662863
AT1G64280.1	Bra031364.1-P	AT1G22070.1	10662863
AT1G64280.1	Bra016389.1-P	AT1G22070.1	15634206
AT1G64280.1	Bra031364.1-P	AT1G22070.1	15634206
AT1G64280.1	Bra016291.1-P	AT1G26830.1	19490895
AT1G64280.1	Bra024680.1-P	AT1G26830.1	19490895
AT1G64280.1	Bra015646.1-P	AT1G77920.1	10662863
AT1G64280.1	Bra015646.1-P	AT1G77920.1	15634206
AT1G64280.1	Bra017343.1-P	AT3G25882.1	11442055
AT1G64280.1	Bra025169.1-P	AT3G25882.1	11442055
AT1G64280.1	Bra036362.1-P	AT3G25882.1	11442055
AT1G64280.1	Bra017343.1-P	AT3G25882.1	21798944
AT1G64280.1	Bra025169.1-P	AT3G25882.1	21798944
AT1G64280.1	Bra036362.1-P	AT3G25882.1	21798944
AT1G64280.1	Bra032760.1-P	AT4G14110.1	19490895
AT1G64280.1	Bra038444.1-P	AT4G14110.1	19490895
AT1G64280.1	Bra028713.1-P	AT5G06960.1	10659709
AT1G64280.1	Bra028713.1-P	AT5G06960.1	10662863
AT1G64280.1	Bra028713.1-P	AT5G06960.1	12383081
AT1G64280.1	Bra028713.1-P	AT5G06960.1	15634206
AT1G64280.1	Bra033654.1-P	AT5G42970.1	19490895
AT1G64280.1	Bra035336.1-P	AT5G42970.1	19490895

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34413	Canola	cytosol	98.42	98.59
CDY25575	Canola	cytosol	97.19	97.19
AT1G64280.1	Thale cress	cytosol	75.44	72.51
Bra013950.1-P	Field mustard	cytosol	67.02	65.98
Bra013952.1-P	Field mustard	cytosol	63.51	59.83
VIT_11s0016g01990.t01	Wine grape	cytosol	55.61	54.28
Solyc07g040690.2.1	Tomato	cytosol	53.51	52.95
KRH37416	Soybean	cytosol	50.35	49.31
GSMUA_Achr2P16670_001	Banana	cytosol	50.0	48.8
GSMUA_Achr7P09190_001	Banana	cytosol	49.12	48.7
Os01t0194300-01	Rice	cytosol	48.25	47.25
Zm00001d039469_P001	Maize	cytosol	48.25	47.17
EES00131	Sorghum	cytosol	47.37	46.31
TraesCS3B01G123800.1	Wheat	cytosol	46.84	46.27
TraesCS3D01G107500.1	Wheat	cytosol	46.84	46.03
TraesCS3A01G105400.1	Wheat	cytosol	46.32	45.75
GSMUA_Achr6P00950_001	Banana	nucleus	50.53	45.71
HORVU3Hr1G019230.6	Barley	cytosol	47.19	44.98
GSMUA_AchrUn_...	Banana	cytosol	44.91	44.52
GSMUA_Achr8P05490_001	Banana	cytosol	44.74	43.89
TraesCS7D01G019000.1	Wheat	cytosol, mitochondrion	37.37	43.74
TraesCS4A01G470500.1	Wheat	cytosol	37.02	43.15
GSMUA_Achr3P25880_001	Banana	cytosol	42.98	43.13
TraesCS7A01G021800.1	Wheat	cytosol, plastid	38.77	39.53
Bra010439.1-P	Field mustard	cytosol	64.04	37.94
Bra013416.1-P	Field mustard	plastid	38.25	37.07
Bra025093.1-P	Field mustard	plastid	35.44	37.0
Bra021949.1-P	Field mustard	plastid	36.32	36.83
Bra014645.1-P	Field mustard	cytosol	12.98	25.43
Bra007306.1-P	Field mustard	cytosol	20.53	25.32
Bra003268.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	20.35	25.11
Bra004617.1-P	Field mustard	cytosol	13.68	24.61
Bra004618.1-P	Field mustard	cytosol	7.72	24.18
Bra016938.1-P	Field mustard	cytosol	20.53	24.02
TraesCS7A01G022800.1	Wheat	cytosol	41.23	15.7

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.2	MapMan:26.8.3.1.1	Gene3D:3.30.710.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra027690	EnsemblPlants:Bra027690.1	EnsemblPlants:Bra027690.1-P	GO:GO:0001666
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009408	GO:GO:0009605	GO:GO:0009607
GO:GO:0009611	GO:GO:0009617	GO:GO:0009625	GO:GO:0009627	GO:GO:0009628	GO:GO:0009682
GO:GO:0009719	GO:GO:0009862	GO:GO:0009987	GO:GO:0010112	GO:GO:0031348	GO:GO:0045893
GO:GO:0050832	GO:GO:2000022	GO:GO:2000031	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	UniProt:M4EFX7	InterPro:NPR1/NIM1-like_C	InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900
PFAM:PF12313	PFscan:PS50088	PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF124
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI0002542381
SEG:seg	:	:	:	:	:

Description

AT1G64280 (E=2e-195) NPR1, SAI1, NIM1, ATNPR1 | NPR1 (NONEXPRESSER OF PR GENES 1); protein binding / transcription activator

Coordinates

chrA09:+:6933636..6935798

Molecular Weight (calculated)

63441.3 Da

IEP (calculated)

6.403

GRAVY (calculated)

-0.134

Length

570 amino acids

Sequence
(BLAST)

001: MDSFAGFGNS YEFSSTSFFF TAPTDSSILY APTAPDASAL RLLSNSLESV FDSPESFYSD AKLVLSGGRE VSFHRVLLAA RSPFFRNALT TAVVKLELKE
101: IAKDHVVGVD SVVAVLAYIY SGRVKPPPKG VSECADESCG HVSCRPAVDF MVEVLYLASV FEIHELATLY QRHLLDVVDK VVVIEDTLLV LKLSSICGEA
201: CKKLTDRCLK IIVKSDVDLV TLDKSLPQHI VKEIVKLRND LGFEVPELEK HVLNIYKALD SDDVELVKML LTEGHTNLDD AYALHFAVKY CDVKTANDLL
301: DLEIADVNLR NPRGYTVLHV AAMRKEPDLI LSLLTKGSRA SETSFEGRTA LLIAKQVTMA AEYNNLAEQC KPSLKGRICV EILEQADKGD PFPRDVSPSL
401: AMADHELKMR LLDLENRVAL AQRLFPTEAQ VAMNIAQVKG TSEFTVSSLD PDYLIGAKRT SPFKILEEHQ SRLKALSKTV ELGKRFFPRC SAVLDQIMDC
501: DDLTQLACGE GDTPEKRLQK KQRYMEIQET VKKAFTEDKE EHGNSSLSAS SSSTFKSIAR KRSKLYHRRR

Best Arabidopsis Sequence Match ( AT1G64280.1 )
(BLAST)

001: MDTTIDGFAD SYEISSTSFV ATDNTDSSIV YLAAEQVLTG PDVSALQLLS NSFESVFDSP DDFYSDAKLV LSDGREVSFH RCVLSARSSF FKSALAAAKK
101: EKDSNNTAAV KLELKEIAKD YEVGFDSVVT VLAYVYSSRV RPPPKGVSEC ADENCCHVAC RPAVDFMLEV LYLAFIFKIP ELITLYQRHL LDVVDKVVIE
201: DTLVILKLAN ICGKACMKLL DRCKEIIVKS NVDMVSLEKS LPEELVKEII DRRKELGLEV PKVKKHVSNV HKALDSDDIE LVKLLLKEDH TNLDDACALH
301: FAVAYCNVKT ATDLLKLDLA DVNHRNPRGY TVLHVAAMRK EPQLILSLLE KGASASEATL EGRTALMIAK QATMAVECNN IPEQCKHSLK GRLCVEILEQ
401: EDKREQIPRD VPPSFAVAAD ELKMTLLDLE NRVALAQRLF PTEAQAAMEI AEMKGTCEFI VTSLEPDRLT GTKRTSPGVK IAPFRILEEH QSRLKALSKT
501: VELGKRFFPR CSAVLDQIMN CEDLTQLACG EDDTAEKRLQ KKQRYMEIQE TLKKAFSEDN LELGNSSLTD STSSTSKSTG GKRSNRKLSH RRR

Arabidopsis Description

NPR1Regulatory protein NPR1 [Source:UniProtKB/Swiss-Prot;Acc:P93002]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.