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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY34413 Canola cytosol 72.68 75.75
Bra027690.1-P Field mustard cytosol, plastid 72.51 75.44
CDY25575 Canola cytosol 72.34 75.26
AT4G26120.2 Thale cress cytosol, plastid 62.06 61.23
Solyc07g040690.2.1 Tomato cytosol 51.6 53.12
VIT_11s0016g01990.t01 Wine grape cytosol 52.28 53.08
KRH37416 Soybean cytosol 49.24 50.17
GSMUA_Achr2P16670_001 Banana cytosol 47.72 48.46
GSMUA_Achr7P09190_001 Banana cytosol 46.54 48.0
Os01t0194300-01 Rice cytosol 45.03 45.88
Zm00001d039469_P001 Maize cytosol 44.35 45.11
EES00131 Sorghum cytosol 44.35 45.11
GSMUA_Achr6P00950_001 Banana nucleus 47.39 44.6
TraesCS3B01G123800.1 Wheat cytosol 43.34 44.54
TraesCS3A01G105400.1 Wheat cytosol 43.34 44.54
GSMUA_AchrUn_... Banana cytosol 42.83 44.17
TraesCS4A01G470500.1 Wheat cytosol 36.26 43.97
TraesCS3D01G107500.1 Wheat cytosol 42.66 43.62
GSMUA_Achr3P25880_001 Banana cytosol 41.32 43.13
TraesCS7D01G019000.1 Wheat cytosol, mitochondrion 35.41 43.12
HORVU3Hr1G019230.6 Barley cytosol 43.34 42.98
GSMUA_Achr8P05490_001 Banana cytosol 41.48 42.34
TraesCS7A01G021800.1 Wheat cytosol, plastid 37.27 39.53
AT4G19660.2 Thale cress cytosol, plastid 35.75 35.27
AT5G45110.1 Thale cress cytosol, plastid 34.4 34.81
AT3G57130.1 Thale cress cytosol 20.07 25.48
AT2G41370.1 Thale cress cytosol 19.56 23.63
TraesCS7A01G022800.1 Wheat cytosol 39.97 15.83
Protein Annotations
Gene3D:1.25.40.20MapMan:11.8.2.2MapMan:26.8.3.1.1Gene3D:3.30.710.10EntrezGene:842733ProteinID:AAB58262.1
ProteinID:AAG51705.1ProteinID:ABR46013.1ProteinID:ABR46020.1ProteinID:ABR46022.1ProteinID:ABR46028.1ProteinID:ABR46029.1
ProteinID:ABR46030.1ProteinID:AEE34220.1ProteinID:AIK27558.1ArrayExpress:AT1G64280EnsemblPlantsGene:AT1G64280RefSeq:AT1G64280
TAIR:AT1G64280RefSeq:AT1G64280-TAIR-GEnsemblPlants:AT1G64280.1TAIR:AT1G64280.1EMBL:AY050455EMBL:AY093992
InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfUnigene:At.22448UniProt:B2BDI6InterPro:BTB/POZ_dom
ncoils:CoilGO:GO:0001666GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006139GO:GO:0006464
GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0008219GO:GO:0009058GO:GO:0009408GO:GO:0009605GO:GO:0009607GO:GO:0009611
GO:GO:0009617GO:GO:0009625GO:GO:0009626GO:GO:0009627GO:GO:0009628GO:GO:0009682
GO:GO:0009719GO:GO:0009862GO:GO:0009987GO:GO:0010112GO:GO:0016567GO:GO:0019538
GO:GO:0031348GO:GO:0045893GO:GO:0050832GO:GO:2000022GO:GO:2000031EMBL:HQ845963
InterPro:IPR000210InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770Symbol:NPR1InterPro:NPR1/NIM1-like_C
InterPro:NPR_central_domRefSeq:NP_176610.1UniProt:P93002PFAM:PF00651PFAM:PF11900PFAM:PF12313
PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
PFscan:PS50088PFscan:PS50097PFscan:PS50297PANTHER:PTHR24413PANTHER:PTHR24413:SF124InterPro:SKP1/BTB/POZ_sf
SMART:SM00225SMART:SM00248SUPFAM:SSF48403SUPFAM:SSF54695EMBL:U76707UniParc:UPI0000001183
SEG:seg:::::
Description
NPR1Regulatory protein NPR1 [Source:UniProtKB/Swiss-Prot;Acc:P93002]
Coordinates
chr1:-:23852748..23855658
Molecular Weight (calculated)
66035.5 Da
IEP (calculated)
5.863
GRAVY (calculated)
-0.213
Length
593 amino acids
Sequence
(BLAST)
001: MDTTIDGFAD SYEISSTSFV ATDNTDSSIV YLAAEQVLTG PDVSALQLLS NSFESVFDSP DDFYSDAKLV LSDGREVSFH RCVLSARSSF FKSALAAAKK
101: EKDSNNTAAV KLELKEIAKD YEVGFDSVVT VLAYVYSSRV RPPPKGVSEC ADENCCHVAC RPAVDFMLEV LYLAFIFKIP ELITLYQRHL LDVVDKVVIE
201: DTLVILKLAN ICGKACMKLL DRCKEIIVKS NVDMVSLEKS LPEELVKEII DRRKELGLEV PKVKKHVSNV HKALDSDDIE LVKLLLKEDH TNLDDACALH
301: FAVAYCNVKT ATDLLKLDLA DVNHRNPRGY TVLHVAAMRK EPQLILSLLE KGASASEATL EGRTALMIAK QATMAVECNN IPEQCKHSLK GRLCVEILEQ
401: EDKREQIPRD VPPSFAVAAD ELKMTLLDLE NRVALAQRLF PTEAQAAMEI AEMKGTCEFI VTSLEPDRLT GTKRTSPGVK IAPFRILEEH QSRLKALSKT
501: VELGKRFFPR CSAVLDQIMN CEDLTQLACG EDDTAEKRLQ KKQRYMEIQE TLKKAFSEDN LELGNSSLTD STSSTSKSTG GKRSNRKLSH RRR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.