Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94371 | Canola | cytosol | 71.88 | 71.41 |
| Bra013952.1-P | Field mustard | cytosol | 71.55 | 71.07 |
| CDX89362 | Canola | cytosol | 71.05 | 70.58 |
| AT1G64280.1 | Thale cress | cytosol | 61.23 | 62.06 |
| VIT_11s0016g01990.t01 | Wine grape | cytosol | 51.75 | 53.25 |
| Solyc07g040690.2.1 | Tomato | cytosol | 48.59 | 50.69 |
| KRH37416 | Soybean | cytosol | 46.59 | 48.11 |
| GSMUA_Achr2P16670_001 | Banana | cytosol | 45.59 | 46.92 |
| GSMUA_Achr7P09190_001 | Banana | cytosol | 44.43 | 46.43 |
| Os01t0194300-01 | Rice | cytosol | 43.09 | 44.5 |
| Zm00001d039469_P001 | Maize | cytosol | 42.76 | 44.08 |
| GSMUA_Achr6P00950_001 | Banana | nucleus | 45.76 | 43.65 |
| TraesCS3A01G105400.1 | Wheat | cytosol | 41.76 | 43.5 |
| TraesCS3B01G123800.1 | Wheat | cytosol | 41.76 | 43.5 |
| TraesCS3D01G107500.1 | Wheat | cytosol | 41.6 | 43.1 |
| EES00131 | Sorghum | cytosol | 41.76 | 43.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 40.43 | 42.26 |
| TraesCS4A01G470500.1 | Wheat | cytosol | 34.28 | 42.13 |
| TraesCS7D01G019000.1 | Wheat | cytosol, mitochondrion | 33.94 | 41.89 |
| HORVU3Hr1G019230.6 | Barley | cytosol | 41.26 | 41.47 |
| GSMUA_Achr8P05490_001 | Banana | cytosol | 39.93 | 41.31 |
| GSMUA_Achr3P25880_001 | Banana | cytosol | 37.94 | 40.14 |
| TraesCS7A01G021800.1 | Wheat | cytosol, plastid | 35.11 | 37.75 |
| AT5G45110.1 | Thale cress | cytosol, plastid | 34.94 | 35.84 |
| AT4G19660.2 | Thale cress | cytosol, plastid | 35.44 | 35.44 |
| AT3G57130.1 | Thale cress | cytosol | 20.13 | 25.91 |
| AT2G41370.1 | Thale cress | cytosol | 19.97 | 24.44 |
| TraesCS7A01G022800.1 | Wheat | cytosol | 38.1 | 15.3 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:11.8.2.2 | MapMan:26.8.3.1.1 | Gene3D:3.30.710.10 | EntrezGene:828718 | UniProt:A0A178UV56 |
| UniProt:A0A1P8B8B0 | ProteinID:AEE85160.1 | ProteinID:ANM67821.1 | ArrayExpress:AT4G26120 | EnsemblPlantsGene:AT4G26120 | RefSeq:AT4G26120 |
| TAIR:AT4G26120 | RefSeq:AT4G26120-TAIR-G | EnsemblPlants:AT4G26120.2 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| Unigene:At.54516 | InterPro:BTB/POZ_dom | ProteinID:CAB39677.1 | ProteinID:CAB79467.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009719 | GO:GO:0009987 |
| GO:GO:0010200 | GO:GO:0016567 | GO:GO:0019538 | InterPro:IPR000210 | InterPro:IPR002110 | InterPro:IPR020683 |
| InterPro:IPR036770 | InterPro:NPR1/NIM1-like_C | InterPro:NPR_central_dom | RefSeq:NP_001329623.1 | RefSeq:NP_194342.1 | ProteinID:OAO97410.1 |
| PFAM:PF00023 | PFAM:PF00651 | PFAM:PF11900 | PFAM:PF12313 | PFscan:PS50088 | PFscan:PS50097 |
| PFscan:PS50297 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF124 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 | SMART:SM00248 |
| SUPFAM:SSF48403 | SUPFAM:SSF54695 | UniParc:UPI00001A5121 | SEG:seg | : | : |
Description
Ankyrin repeat family protein / BTB/POZ domain-containing protein [Source:TAIR;Acc:AT4G26120]
Coordinates
chr4:+:13236253..13238818
Molecular Weight (calculated)
68141.2 Da
IEP (calculated)
6.219
GRAVY (calculated)
-0.211
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MMATTTTTTT ARFSDSYEFS NTSGNSFFAA ESSLDYPTEF LTPPEVSALK LLSNCLESVF DSPETFYSDA KLVLAGGREV SFHRCILSAR IPVFKSALAT
101: VKEQKSSTTV KLQLKEIARD YEVGFDSVVA VLAYVYSGRV RSPPKGASAC VDDDCCHVAC RSKVDFMVEV LYLSFVFQIQ ELVTLYERQF LEIVDKVVVE
201: DILVIFKLDT LCGTTYKKLL DRCIEIIVKS DIELVSLEKS LPQHIFKQII DIREALCLEP PKLERHVKNI YKALDSDDVE LVKMLLLEGH TNLDEAYALH
301: FAIAHCAVKT AYDLLELELA DVNLRNPRGY TVLHVAAMRK EPKLIISLLM KGANILDTTL DGRTALVIVK RLTKADDYKT STEDGTPSLK GGLCIEVLEH
401: EQKLEYLSPI EASLSLPVTP EELRMRLLYY ENRVALARLL FPVETETVQG IAKLEETCEF TASSLEPDHH IGEKRTSLDL NMAPFQIHEK HLSRLRALCK
501: TVELGKRYFK RCSLDHFMDT EDLNHLASVE EDTPEKRLQK KQRYMELQET LMKTFSEDKE ECGKSSTPKP TSAVRSNRKL SHRRLKVDKR DFLKRPYGNG
601: D
101: VKEQKSSTTV KLQLKEIARD YEVGFDSVVA VLAYVYSGRV RSPPKGASAC VDDDCCHVAC RSKVDFMVEV LYLSFVFQIQ ELVTLYERQF LEIVDKVVVE
201: DILVIFKLDT LCGTTYKKLL DRCIEIIVKS DIELVSLEKS LPQHIFKQII DIREALCLEP PKLERHVKNI YKALDSDDVE LVKMLLLEGH TNLDEAYALH
301: FAIAHCAVKT AYDLLELELA DVNLRNPRGY TVLHVAAMRK EPKLIISLLM KGANILDTTL DGRTALVIVK RLTKADDYKT STEDGTPSLK GGLCIEVLEH
401: EQKLEYLSPI EASLSLPVTP EELRMRLLYY ENRVALARLL FPVETETVQG IAKLEETCEF TASSLEPDHH IGEKRTSLDL NMAPFQIHEK HLSRLRALCK
501: TVELGKRYFK RCSLDHFMDT EDLNHLASVE EDTPEKRLQK KQRYMELQET LMKTFSEDKE ECGKSSTPKP TSAVRSNRKL SHRRLKVDKR DFLKRPYGNG
601: D
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.