Factsheet for HORVU3Hr1G019230.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G032230.4
HORVU1Hr1G068220.1
HORVU2Hr1G016580.5
HORVU2Hr1G074740.2
HORVU2Hr1G074780.1
HORVU2Hr1G116090.2
HORVU3Hr1G042790.4
HORVU3Hr1G042830.1
HORVU3Hr1G079010.5
HORVU4Hr1G052330.3
HORVU4Hr1G070980.1
HORVU6Hr1G075720.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64280.1	HORVU2Hr1G116090.2	AT1G22070.1	10659709
AT1G64280.1	HORVU2Hr1G116090.2	AT1G22070.1	10662863
AT1G64280.1	HORVU2Hr1G116090.2	AT1G22070.1	15634206
AT1G64280.1	HORVU6Hr1G075720.2	AT1G26830.1	19490895
AT1G64280.1	HORVU2Hr1G116090.2	AT1G77920.1	10662863
AT1G64280.1	HORVU2Hr1G116090.2	AT1G77920.1	15634206
AT1G64280.1	HORVU2Hr1G074740.2	AT4G14110.1	19490895
AT1G64280.1	HORVU2Hr1G074780.1	AT4G14110.1	19490895
AT1G64280.1	HORVU0Hr1G032230.4	AT5G06960.1	10659709
AT1G64280.1	HORVU1Hr1G068220.1	AT5G06960.1	10659709
AT1G64280.1	HORVU2Hr1G016580.5	AT5G06960.1	10659709
AT1G64280.1	HORVU3Hr1G042790.4	AT5G06960.1	10659709
AT1G64280.1	HORVU3Hr1G042830.1	AT5G06960.1	10659709
AT1G64280.1	HORVU3Hr1G079010.5	AT5G06960.1	10659709
AT1G64280.1	HORVU4Hr1G052330.3	AT5G06960.1	10659709
AT1G64280.1	HORVU0Hr1G032230.4	AT5G06960.1	10662863
AT1G64280.1	HORVU1Hr1G068220.1	AT5G06960.1	10662863
AT1G64280.1	HORVU2Hr1G016580.5	AT5G06960.1	10662863
AT1G64280.1	HORVU3Hr1G042790.4	AT5G06960.1	10662863
AT1G64280.1	HORVU3Hr1G042830.1	AT5G06960.1	10662863
AT1G64280.1	HORVU3Hr1G079010.5	AT5G06960.1	10662863
AT1G64280.1	HORVU4Hr1G052330.3	AT5G06960.1	10662863
AT1G64280.1	HORVU0Hr1G032230.4	AT5G06960.1	12383081
AT1G64280.1	HORVU1Hr1G068220.1	AT5G06960.1	12383081
AT1G64280.1	HORVU2Hr1G016580.5	AT5G06960.1	12383081
AT1G64280.1	HORVU3Hr1G042790.4	AT5G06960.1	12383081
AT1G64280.1	HORVU3Hr1G042830.1	AT5G06960.1	12383081
AT1G64280.1	HORVU3Hr1G079010.5	AT5G06960.1	12383081
AT1G64280.1	HORVU4Hr1G052330.3	AT5G06960.1	12383081
AT1G64280.1	HORVU0Hr1G032230.4	AT5G06960.1	15634206
AT1G64280.1	HORVU1Hr1G068220.1	AT5G06960.1	15634206
AT1G64280.1	HORVU2Hr1G016580.5	AT5G06960.1	15634206
AT1G64280.1	HORVU3Hr1G042790.4	AT5G06960.1	15634206
AT1G64280.1	HORVU3Hr1G042830.1	AT5G06960.1	15634206
AT1G64280.1	HORVU3Hr1G079010.5	AT5G06960.1	15634206
AT1G64280.1	HORVU4Hr1G052330.3	AT5G06960.1	15634206
AT1G64280.1	HORVU4Hr1G070980.1	AT5G42970.1	19490895

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G123800.1	Wheat	cytosol	89.3	92.55
TraesCS3A01G105400.1	Wheat	cytosol	88.96	92.2
TraesCS3D01G107500.1	Wheat	cytosol	89.13	91.9
Os01t0194300-01	Rice	cytosol	78.09	80.24
Zm00001d039469_P001	Maize	cytosol	75.42	77.36
EES00131	Sorghum	cytosol	75.25	77.19
GSMUA_Achr2P16670_001	Banana	cytosol	63.55	65.07
GSMUA_Achr7P09190_001	Banana	cytosol	60.37	62.78
Solyc07g040690.2.1	Tomato	cytosol	55.85	57.99
GSMUA_Achr6P00950_001	Banana	nucleus	60.54	57.46
VIT_11s0016g01990.t01	Wine grape	cytosol	54.68	55.99
KRH37416	Soybean	cytosol	51.84	53.26
Bra027690.1-P	Field mustard	cytosol, plastid	44.98	47.19
CDY34413	Canola	cytosol	44.82	47.1
CDY25575	Canola	cytosol	44.65	46.84
AT1G64280.1	Thale cress	cytosol	42.98	43.34
Bra013950.1-P	Field mustard	cytosol	41.64	43.01
CDY50004	Canola	cytosol	42.14	42.28
AT4G26120.2	Thale cress	cytosol, plastid	41.47	41.26
Bra013952.1-P	Field mustard	cytosol	41.64	41.16
CDX94371	Canola	cytosol	41.64	41.16
CDX94376	Canola	cytosol	41.64	41.09
CDX89364	Canola	cytosol	41.64	40.95
CDX89362	Canola	cytosol	41.14	40.66
HORVU3Hr1G074640.4	Barley	cytosol, plastid	39.3	38.09
HORVU4Hr1G003040.1	Barley	cytosol, plastid	35.62	36.16
Bra010439.1-P	Field mustard	cytosol	41.14	25.57
CDY14314	Canola	nucleus	35.62	25.3
HORVU3Hr1G106880.5	Barley	cytosol	21.57	25.15

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.2	MapMan:26.8.3.1.1	Gene3D:3.30.710.10	UniProt:A0A287KBQ5	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006950
GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0042742	GO:GO:0050832	GO:GO:0080027
EnsemblPlantsGene:HORVU3Hr1G019230	EnsemblPlants:HORVU3Hr1G019230.6	InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
InterPro:NPR1/NIM1-like_C	InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900	PFAM:PF12313	PFAM:PF12796
PFscan:PS50088	PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF124	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695	UniParc:UPI000B4625F2	SEG:seg

Description

No Description!

Coordinates

chrchr3H:-:52347860..52353239

Molecular Weight (calculated)

65447.2 Da

IEP (calculated)

5.551

GRAVY (calculated)

-0.152

Length

598 amino acids

Sequence
(BLAST)

001: LHQLAALPTP EPHAAAATAA PMEAPSSHVT TSFSDCDSVS MEDAAPDADV EALRRLSDNL AAAFRSPDDF AFLADARFAV PGAPDLCVHR CVLSARSPFL
101: RALFKRRAAA AGSAGGAEGD RVELRELLGG EVEVGYEALR LVLDYLYSGR VCDLPKTACA CVDEGGCAHV GCHPAVSFMA QVLFAASTFQ VGELASLFQQ
201: RHLLDLLDKV EADNLPLVLS VANLCNKSCV KLFERCLERV VRSDLDMITL DKALPLDVIK QIIDSRITLG LASPEDNGFP NKHVRRILSA LDSDDVELVR
301: LLLKEGQTNL DDAFALHYAV EHCDSKITTE LLDIALADVN LRNPRGYTVL HIAARRRDPK IVVSLLTKGA RPSDFTFDGR KAVQIAKRLT KHGDYFGNTE
401: EGKPSPNDKL CIEILEEAER RDPQLGEASV SLALAGDCLR GKLLYLENRV ALARIMFPIE ARVAMDIAQV DGTLEFTLGS CTNPPPEITT VDLNDTPFKM
501: KDEHLARMRA LSKTVELGKR FFPRCSNVLD KIMDDEPELA SLGRDASSER KRRFHDLQDT LLKAFSEDKE EFARSATLSA SSSSTPTVAR NLTGRPRR

Best Arabidopsis Sequence Match ( AT4G26120.2 )
(BLAST)

001: MMATTTTTTT ARFSDSYEFS NTSGNSFFAA ESSLDYPTEF LTPPEVSALK LLSNCLESVF DSPETFYSDA KLVLAGGREV SFHRCILSAR IPVFKSALAT
101: VKEQKSSTTV KLQLKEIARD YEVGFDSVVA VLAYVYSGRV RSPPKGASAC VDDDCCHVAC RSKVDFMVEV LYLSFVFQIQ ELVTLYERQF LEIVDKVVVE
201: DILVIFKLDT LCGTTYKKLL DRCIEIIVKS DIELVSLEKS LPQHIFKQII DIREALCLEP PKLERHVKNI YKALDSDDVE LVKMLLLEGH TNLDEAYALH
301: FAIAHCAVKT AYDLLELELA DVNLRNPRGY TVLHVAAMRK EPKLIISLLM KGANILDTTL DGRTALVIVK RLTKADDYKT STEDGTPSLK GGLCIEVLEH
401: EQKLEYLSPI EASLSLPVTP EELRMRLLYY ENRVALARLL FPVETETVQG IAKLEETCEF TASSLEPDHH IGEKRTSLDL NMAPFQIHEK HLSRLRALCK
501: TVELGKRYFK RCSLDHFMDT EDLNHLASVE EDTPEKRLQK KQRYMELQET LMKTFSEDKE ECGKSSTPKP TSAVRSNRKL SHRRLKVDKR DFLKRPYGNG
601: D

Arabidopsis Description

Ankyrin repeat family protein / BTB/POZ domain-containing protein [Source:TAIR;Acc:AT4G26120]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.