Factsheet for Solyc07g040690.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008730.2.1
Solyc01g010820.2.1
Solyc01g104600.2.1
Solyc04g072460.2.1
Solyc04g080160.2.1
Solyc11g064950.1.1
Solyc12g056860.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64280.1	Solyc04g072460.2.1	AT1G22070.1	10659709
AT1G64280.1	Solyc12g056860.1.1	AT1G22070.1	10659709
AT1G64280.1	Solyc04g072460.2.1	AT1G22070.1	10662863
AT1G64280.1	Solyc12g056860.1.1	AT1G22070.1	10662863
AT1G64280.1	Solyc04g072460.2.1	AT1G22070.1	15634206
AT1G64280.1	Solyc12g056860.1.1	AT1G22070.1	15634206
AT1G64280.1	Solyc01g010820.2.1	AT1G26830.1	19490895
AT1G64280.1	Solyc04g072460.2.1	AT1G77920.1	10662863
AT1G64280.1	Solyc12g056860.1.1	AT1G77920.1	10662863
AT1G64280.1	Solyc04g072460.2.1	AT1G77920.1	15634206
AT1G64280.1	Solyc12g056860.1.1	AT1G77920.1	15634206
AT1G64280.1	Solyc01g104600.2.1	AT4G14110.1	19490895
AT1G64280.1	Solyc01g008730.2.1	AT5G06960.1	10659709
AT1G64280.1	Solyc11g064950.1.1	AT5G06960.1	10659709
AT1G64280.1	Solyc01g008730.2.1	AT5G06960.1	10662863
AT1G64280.1	Solyc11g064950.1.1	AT5G06960.1	10662863
AT1G64280.1	Solyc01g008730.2.1	AT5G06960.1	12383081
AT1G64280.1	Solyc11g064950.1.1	AT5G06960.1	12383081
AT1G64280.1	Solyc01g008730.2.1	AT5G06960.1	15634206
AT1G64280.1	Solyc11g064950.1.1	AT5G06960.1	15634206
AT1G64280.1	Solyc04g080160.2.1	AT5G42970.1	19490895

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g01990.t01	Wine grape	cytosol	71.88	70.89
KRH37416	Soybean	cytosol	66.49	65.81
GSMUA_Achr2P16670_001	Banana	cytosol	63.54	62.67
GSMUA_Achr7P09190_001	Banana	cytosol	61.46	61.57
Os01t0194300-01	Rice	cytosol	59.9	59.28
TraesCS3B01G123800.1	Wheat	cytosol	58.51	58.41
TraesCS3A01G105400.1	Wheat	cytosol	58.16	58.06
GSMUA_Achr6P00950_001	Banana	nucleus	63.37	57.94
Zm00001d039469_P001	Maize	cytosol	58.33	57.63
TraesCS3D01G107500.1	Wheat	cytosol	57.99	57.59
EES00131	Sorghum	cytosol	57.99	57.29
TraesCS7D01G019000.1	Wheat	cytosol, mitochondrion	48.09	56.88
HORVU3Hr1G019230.6	Barley	cytosol	57.99	55.85
TraesCS4A01G470500.1	Wheat	cytosol	47.05	55.42
CDY25575	Canola	cytosol	53.12	53.68
Bra027690.1-P	Field mustard	cytosol, plastid	52.95	53.51
CDY34413	Canola	cytosol	52.6	53.25
AT1G64280.1	Thale cress	cytosol	53.12	51.6
Bra013950.1-P	Field mustard	cytosol	51.74	51.47
CDY50004	Canola	cytosol	52.26	50.5
GSMUA_AchrUn_...	Banana	cytosol	49.65	49.74
CDX89364	Canola	cytosol	52.26	49.51
CDX94376	Canola	cytosol	51.74	49.17
AT4G26120.2	Thale cress	cytosol, plastid	50.69	48.59
GSMUA_Achr3P25880_001	Banana	cytosol	47.4	48.06
CDX94371	Canola	cytosol	50.35	47.93
GSMUA_Achr8P05490_001	Banana	cytosol	48.26	47.85
Bra013952.1-P	Field mustard	cytosol	50.17	47.77
CDX89362	Canola	cytosol	50.0	47.6
TraesCS7A01G021800.1	Wheat	cytosol, plastid	46.18	47.59
Solyc02g069310.2.1	Tomato	cytosol, plastid	42.36	42.0
Solyc07g044980.2.1	Tomato	nucleus	40.28	40.49
Bra010439.1-P	Field mustard	cytosol	50.52	30.25
CDY14314	Canola	nucleus	41.49	28.38
Solyc10g079460.1.1	Tomato	cytosol	21.88	25.51
Solyc10g079750.1.1	Tomato	cytosol	21.35	25.2
Solyc04g040220.2.1	Tomato	cytosol	20.31	25.11
Solyc05g018160.1.1	Tomato	cytosol	10.42	21.43
TraesCS7A01G022800.1	Wheat	cytosol	52.43	20.17

Protein Annotations

Gene3D:1.25.40.20	MapMan:11.8.2.2	MapMan:26.8.3.1.1	Gene3D:3.30.710.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006950
GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0042742	GO:GO:0050832	GO:GO:0080027
InterPro:IPR000210	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:K4CDU6	EMBL:KX198701
InterPro:NPR1/NIM1-like_C	InterPro:NPR_central_dom	PFAM:PF00651	PFAM:PF11900	PFAM:PF12313	PFscan:PS50088
PFscan:PS50097	PFscan:PS50297	PANTHER:PTHR24413	PANTHER:PTHR24413:SF124	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF54695	EnsemblPlantsGene:Solyc07g040690.2	EnsemblPlants:Solyc07g040690.2.1	UniParc:UPI000276B61E
SEG:seg	:	:	:	:	:

Description

NPR1 [Source:UniProtKB/TrEMBL;Acc:K4CDU6]

Coordinates

chr7:-:49383489..49399044

Molecular Weight (calculated)

64193.4 Da

IEP (calculated)

6.260

GRAVY (calculated)

-0.223

Length

576 amino acids

Sequence
(BLAST)

001: MDSRTAFSDS NDISGSSSIC CMNESETSLA DVNSLKRLSE TLESIFDASA PDFDFFADAK LLAPGGKEIP VHRCILSARS PFFKNVFCGK DSNTKLELKE
101: LMKEYEVSFD AVVSVLAYLY SGKVRPASKD VCVCVDNECL HVACRPAVAF MVQVLYASFT FQISQLVDKF QRHLLDILDK AVADDVMMVL SVANICGKAC
201: ERLLSRCIDI IVKSNVDIIT LDKSLPHDIV KQITDSRAEL GLQGPESNGF PDKHVKRIHR ALDSDDVELL RMLLKEGHTT LDDAYALHYA VAYCDAKTTA
301: ELLDLSLADV NHQNPRGHTV LHVAAMRKEP KIIVSLLTKG ARPSDLTSDG KKALQIAKRL TRLVDFTKST EEGKSAPKDR LCIEILEQAE RRDPLLGEAS
401: LSLAMAGDDL RMKLLYLENR VGLAKLLFPM EAKVAMDIAQ VDGTSELPLA SMRKKIADAQ RTTVDLNEAP FKMKEEHLNR LRALSRTVEL GKRFFPRCSE
501: VLNKIMDADD LSEIAYMGND TVEERQLKKQ RYMELQEILS KAFTEDKEEF AKTNMSSSCS STSKGVDKPN NLPFRK

Best Arabidopsis Sequence Match ( AT1G64280.1 )
(BLAST)

001: MDTTIDGFAD SYEISSTSFV ATDNTDSSIV YLAAEQVLTG PDVSALQLLS NSFESVFDSP DDFYSDAKLV LSDGREVSFH RCVLSARSSF FKSALAAAKK
101: EKDSNNTAAV KLELKEIAKD YEVGFDSVVT VLAYVYSSRV RPPPKGVSEC ADENCCHVAC RPAVDFMLEV LYLAFIFKIP ELITLYQRHL LDVVDKVVIE
201: DTLVILKLAN ICGKACMKLL DRCKEIIVKS NVDMVSLEKS LPEELVKEII DRRKELGLEV PKVKKHVSNV HKALDSDDIE LVKLLLKEDH TNLDDACALH
301: FAVAYCNVKT ATDLLKLDLA DVNHRNPRGY TVLHVAAMRK EPQLILSLLE KGASASEATL EGRTALMIAK QATMAVECNN IPEQCKHSLK GRLCVEILEQ
401: EDKREQIPRD VPPSFAVAAD ELKMTLLDLE NRVALAQRLF PTEAQAAMEI AEMKGTCEFI VTSLEPDRLT GTKRTSPGVK IAPFRILEEH QSRLKALSKT
501: VELGKRFFPR CSAVLDQIMN CEDLTQLACG EDDTAEKRLQ KKQRYMEIQE TLKKAFSEDN LELGNSSLTD STSSTSKSTG GKRSNRKLSH RRR

Arabidopsis Description

NPR1Regulatory protein NPR1 [Source:UniProtKB/Swiss-Prot;Acc:P93002]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.