Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G123800.1 | Wheat | cytosol | 95.32 | 95.32 |
| TraesCS3D01G107500.1 | Wheat | cytosol | 95.15 | 94.66 |
| HORVU3Hr1G019230.6 | Barley | cytosol | 92.2 | 88.96 |
| Os01t0194300-01 | Rice | cytosol | 80.76 | 80.07 |
| Zm00001d039469_P001 | Maize | cytosol | 77.47 | 76.67 |
| EES00131 | Sorghum | cytosol | 77.47 | 76.67 |
| TraesCS4A01G470500.1 | Wheat | cytosol | 64.82 | 76.48 |
| TraesCS7A01G021800.1 | Wheat | cytosol, plastid | 64.64 | 66.73 |
| GSMUA_Achr2P16670_001 | Banana | cytosol | 65.16 | 64.38 |
| GSMUA_Achr7P09190_001 | Banana | cytosol | 63.26 | 63.48 |
| Solyc07g040690.2.1 | Tomato | cytosol | 58.06 | 58.16 |
| GSMUA_Achr6P00950_001 | Banana | nucleus | 62.39 | 57.14 |
| VIT_11s0016g01990.t01 | Wine grape | cytosol | 57.19 | 56.51 |
| KRH37416 | Soybean | cytosol | 53.03 | 52.58 |
| Bra027690.1-P | Field mustard | cytosol, plastid | 45.75 | 46.32 |
| CDY34413 | Canola | cytosol | 45.58 | 46.22 |
| CDY25575 | Canola | cytosol | 45.58 | 46.14 |
| Bra013950.1-P | Field mustard | cytosol | 44.02 | 43.87 |
| CDY50004 | Canola | cytosol | 45.06 | 43.62 |
| AT1G64280.1 | Thale cress | cytosol | 44.54 | 43.34 |
| AT4G26120.2 | Thale cress | cytosol, plastid | 43.5 | 41.76 |
| CDX94376 | Canola | cytosol | 43.85 | 41.75 |
| CDX89364 | Canola | cytosol | 43.85 | 41.61 |
| Bra013952.1-P | Field mustard | cytosol | 43.33 | 41.32 |
| CDX94371 | Canola | cytosol | 43.33 | 41.32 |
| CDX89362 | Canola | cytosol | 42.81 | 40.83 |
| TraesCS4A01G294400.1 | Wheat | cytosol, plastid | 37.95 | 36.44 |
| TraesCS3A01G298800.1 | Wheat | plastid | 38.82 | 36.25 |
| TraesCS7A01G022800.1 | Wheat | cytosol | 72.1 | 27.79 |
| Bra010439.1-P | Field mustard | cytosol | 43.5 | 26.09 |
| CDY14314 | Canola | nucleus | 37.78 | 25.89 |
| TraesCS5A01G134700.2 | Wheat | cytosol | 20.8 | 24.34 |
| TraesCS3A01G489000.1 | Wheat | cytosol | 21.32 | 23.93 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:11.8.2.2 | MapMan:26.8.3.1.1 | Gene3D:3.30.710.10 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | InterPro:BTB/POZ_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000210 |
| InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:NPR1/NIM1-like_C | InterPro:NPR_central_dom | PFAM:PF00651 |
| PFAM:PF11900 | PFAM:PF12313 | PFAM:PF12796 | PFscan:PS50088 | PFscan:PS50097 | PFscan:PS50297 |
| PANTHER:PTHR24413 | PANTHER:PTHR24413:SF124 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 | SMART:SM00248 | SUPFAM:SSF48403 |
| SUPFAM:SSF54695 | EnsemblPlantsGene:TraesCS3A01G105400 | EnsemblPlants:TraesCS3A01G105400.1 | TIGR:cd00204 | SEG:seg | : |
Description
No Description!
Coordinates
chr3A:+:69290751..69294410
Molecular Weight (calculated)
63571.9 Da
IEP (calculated)
5.254
GRAVY (calculated)
-0.173
Length
577 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPSSHVTA SFSDCDDSVS MGDAAPDADV EALRRLSDNL AAAFRSPDDF AFLADALVAV PGAPDLRVHR CVLSARSPFL RALFKRRAAA AGSSGGAEGN
101: WLELRELLGD EVEVGYEALE LVLDYLYSGR VRDLPKSACA CVDVDGCAHV GCHPAVSFMA QVLFAASTFQ IGELASLFQR HLLDFLDNVE VDNLPLILSV
201: ANLCNKSCVK LFERCLEIVV RSNLDMITLE KALPEDVIKQ IIDSRITLGL ASPEDNGFPN KHVRRILKAL DSDDVELVRM LLTEGQTNLD DAFALHYAVE
301: HCDSKITTEL LDIALADVNL RNPRGYTVLH IAARRRDPKI VVSLLTKGAR PSDITFDGRK AVQIAKRLTK HGDYFGNTEE GKPSPNDKLC IEILEQAERR
401: DPQLGEASVS LALAGDCLRG KLLYLENRVA LARIMFPIEA RVAMDIAQVD GTLEFTLGPS TNPPLEITTV DLNDTSFKMK EEHLARMRAL SKTVEVGKRF
501: FPRCSNKLDK IMDDEPELAS LGRDASSERR RRFHDLQDAL LKAFSEDKEE FNKTTTLSSS SSSTSTVARN LTGRPRR
101: WLELRELLGD EVEVGYEALE LVLDYLYSGR VRDLPKSACA CVDVDGCAHV GCHPAVSFMA QVLFAASTFQ IGELASLFQR HLLDFLDNVE VDNLPLILSV
201: ANLCNKSCVK LFERCLEIVV RSNLDMITLE KALPEDVIKQ IIDSRITLGL ASPEDNGFPN KHVRRILKAL DSDDVELVRM LLTEGQTNLD DAFALHYAVE
301: HCDSKITTEL LDIALADVNL RNPRGYTVLH IAARRRDPKI VVSLLTKGAR PSDITFDGRK AVQIAKRLTK HGDYFGNTEE GKPSPNDKLC IEILEQAERR
401: DPQLGEASVS LALAGDCLRG KLLYLENRVA LARIMFPIEA RVAMDIAQVD GTLEFTLGPS TNPPLEITTV DLNDTSFKMK EEHLARMRAL SKTVEVGKRF
501: FPRCSNKLDK IMDDEPELAS LGRDASSERR RRFHDLQDAL LKAFSEDKEE FNKTTTLSSS SSSTSTVARN LTGRPRR
001: MATTTTTTTA RFSDSYEFSN TSGNSFFAAE SSLDYPTEFL TPPEVSALKL LSNCLESVFD SPETFYSDAK LVLAGGREVS FHRCILSARI PVFKSALATV
101: KEQKSSTTVK LQLKEIARDY EVGFDSVVAV LAYVYSGRVR SPPKGASACV DDDCCHVACR SKVDFMVEVL YLSFVFQIQE LVTLYERQFL EIVDKVVVED
201: ILVIFKLDTL CGTTYKKLLD RCIEIIVKSD IELVSLEKSL PQHIFKQIID IREALCLEPP KLERHVKNIY KALDSDDVEL VKMLLLEGHT NLDEAYALHF
301: AIAHCAVKTA YDLLELELAD VNLRNPRGYT VLHVAAMRKE PKLIISLLMK GANILDTTLD GRTALVIVKR LTKADDYKTS TEDGTPSLKG GLCIEVLEHE
401: QKLEYLSPIE ASLSLPVTPE ELRMRLLYYE NRVALARLLF PVETETVQGI AKLEETCEFT ASSLEPDHHI GEKRTSLDLN MAPFQIHEKH LSRLRALCKT
501: VELGKRYFKR CSLDHFMDTE DLNHLASVEE DTPEKRLQKK QRYMELQETL MKTFSEDKEE CGKSSTPKPT SAVRSNRKLS HRRLKVDKRD FLKRPYGNGD
101: KEQKSSTTVK LQLKEIARDY EVGFDSVVAV LAYVYSGRVR SPPKGASACV DDDCCHVACR SKVDFMVEVL YLSFVFQIQE LVTLYERQFL EIVDKVVVED
201: ILVIFKLDTL CGTTYKKLLD RCIEIIVKSD IELVSLEKSL PQHIFKQIID IREALCLEPP KLERHVKNIY KALDSDDVEL VKMLLLEGHT NLDEAYALHF
301: AIAHCAVKTA YDLLELELAD VNLRNPRGYT VLHVAAMRKE PKLIISLLMK GANILDTTLD GRTALVIVKR LTKADDYKTS TEDGTPSLKG GLCIEVLEHE
401: QKLEYLSPIE ASLSLPVTPE ELRMRLLYYE NRVALARLLF PVETETVQGI AKLEETCEFT ASSLEPDHHI GEKRTSLDLN MAPFQIHEKH LSRLRALCKT
501: VELGKRYFKR CSLDHFMDTE DLNHLASVEE DTPEKRLQKK QRYMELQETL MKTFSEDKEE CGKSSTPKPT SAVRSNRKLS HRRLKVDKRD FLKRPYGNGD
Arabidopsis Description
Ankyrin repeat family protein / BTB/POZ domain-containing protein [Source:TAIR;Acc:AT4G26120]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.