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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:
  • cytosol 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, secretory
Any Predictor:cytosol, secretory
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G188800.1
TraesCS1B01G196500.2
TraesCS1D01G187600.1
TraesCS2A01G187000.1
TraesCS2A01G228300.1
TraesCS2A01G301900.1
TraesCS2A01G504600.1
TraesCS2B01G220200.1
TraesCS2B01G253600.2
TraesCS2D01G239100.1
TraesCS2D01G300400.2
TraesCS2D01G505300.1
TraesCS3A01G105400.1
TraesCS3B01G123800.1
TraesCS3D01G107500.1
TraesCS4A01G041600.1
TraesCS4A01G470500.1
TraesCS4B01G262600.1
TraesCS4B01G356500.1
TraesCS4D01G262700.1
TraesCS4D01G350200.1
TraesCS5A01G220000.1
TraesCS5A01G406000.1
TraesCS5A01G425300.1
TraesCS5A01G525900.1
TraesCS5B01G219100.1
TraesCS5B01G410800.1
TraesCS5B01G427400.1
TraesCS5D01G228100.1
TraesCS5D01G238500.1
TraesCS5D01G416000.1
TraesCS5D01G433700.3
TraesCS7A01G021800.1
TraesCS7A01G022800.1
TraesCS7A01G315600.1
TraesCS7B01G216600.2
TraesCS7B01G257700.1
TraesCS7D01G019000.1
TraesCS7D01G312600.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G14110.1 TraesCS2A01G228300.1 AT1G02090.1 10330469
AT4G14110.1 TraesCS2B01G253600.2 AT1G02090.1 10330469
AT4G14110.1 TraesCS2D01G239100.1 AT1G02090.1 10330469
AT4G14110.1 TraesCS2A01G228300.1 AT1G02090.1 11742986
AT4G14110.1 TraesCS2B01G253600.2 AT1G02090.1 11742986
AT4G14110.1 TraesCS2D01G239100.1 AT1G02090.1 11742986
AT4G14110.1 TraesCS2A01G228300.1 AT1G02090.1 12615944
AT4G14110.1 TraesCS2B01G253600.2 AT1G02090.1 12615944
AT4G14110.1 TraesCS2D01G239100.1 AT1G02090.1 12615944
AT4G14110.1 TraesCS2A01G504600.1 AT1G22920.1 11701877
AT4G14110.1 TraesCS2D01G505300.1 AT1G22920.1 11701877
AT4G14110.1 TraesCS2A01G504600.1 AT1G22920.1 11742986
AT4G14110.1 TraesCS2D01G505300.1 AT1G22920.1 11742986
AT4G14110.1 TraesCS3A01G105400.1 AT1G64280.1 19490895
AT4G14110.1 TraesCS3B01G123800.1 AT1G64280.1 19490895
AT4G14110.1 TraesCS3D01G107500.1 AT1G64280.1 19490895
AT4G14110.1 TraesCS4A01G470500.1 AT1G64280.1 19490895
AT4G14110.1 TraesCS7A01G021800.1 AT1G64280.1 19490895
AT4G14110.1 TraesCS7A01G022800.1 AT1G64280.1 19490895
AT4G14110.1 TraesCS7D01G019000.1 AT1G64280.1 19490895
AT4G14110.1 TraesCS2A01G504600.1 AT1G71230.1 11742986
AT4G14110.1 TraesCS2D01G505300.1 AT1G71230.1 11742986
AT4G14110.1 TraesCS2A01G504600.1 AT1G71230.1 21798944
AT4G14110.1 TraesCS2D01G505300.1 AT1G71230.1 21798944
AT4G14110.1 TraesCS2A01G187000.1 AT3G13550.1 11877375
AT4G14110.1 TraesCS2B01G220200.1 AT3G13550.1 11877375
AT4G14110.1 TraesCS5A01G220000.1 AT3G56150.1 11029466
AT4G14110.1 TraesCS5A01G406000.1 AT3G56150.1 11029466
AT4G14110.1 TraesCS5B01G219100.1 AT3G56150.1 11029466
AT4G14110.1 TraesCS5B01G410800.1 AT3G56150.1 11029466
AT4G14110.1 TraesCS5D01G228100.1 AT3G56150.1 11029466
AT4G14110.1 TraesCS5D01G416000.1 AT3G56150.1 11029466
AT4G14110.1 TraesCS1A01G188800.1 AT3G61140.1 11701877
AT4G14110.1 TraesCS1B01G196500.2 AT3G61140.1 11701877
AT4G14110.1 TraesCS1D01G187600.1 AT3G61140.1 11701877
AT4G14110.1 TraesCS4B01G356500.1 AT3G61140.1 11701877
AT4G14110.1 TraesCS4D01G350200.1 AT3G61140.1 11701877
AT4G14110.1 TraesCS5A01G525900.1 AT3G61140.1 11701877
AT4G14110.1 TraesCS5D01G238500.1 AT3G61140.1 11701877
AT4G14110.1 TraesCS7B01G257700.1 AT3G61140.1 11701877
AT4G14110.1 TraesCS1A01G188800.1 AT3G61140.1 12615944
AT4G14110.1 TraesCS1B01G196500.2 AT3G61140.1 12615944
AT4G14110.1 TraesCS1D01G187600.1 AT3G61140.1 12615944
AT4G14110.1 TraesCS4B01G356500.1 AT3G61140.1 12615944
AT4G14110.1 TraesCS4D01G350200.1 AT3G61140.1 12615944
AT4G14110.1 TraesCS5A01G525900.1 AT3G61140.1 12615944
AT4G14110.1 TraesCS5D01G238500.1 AT3G61140.1 12615944
AT4G14110.1 TraesCS7B01G257700.1 AT3G61140.1 12615944
AT4G14110.1 TraesCS1A01G188800.1 AT3G61140.1 9811788
AT4G14110.1 TraesCS1B01G196500.2 AT3G61140.1 9811788
AT4G14110.1 TraesCS1D01G187600.1 AT3G61140.1 9811788
AT4G14110.1 TraesCS4B01G356500.1 AT3G61140.1 9811788
AT4G14110.1 TraesCS4D01G350200.1 AT3G61140.1 9811788
AT4G14110.1 TraesCS5A01G525900.1 AT3G61140.1 9811788
AT4G14110.1 TraesCS5D01G238500.1 AT3G61140.1 9811788
AT4G14110.1 TraesCS7B01G257700.1 AT3G61140.1 9811788
AT4G14110.1 TraesCS2A01G301900.1 AT4G14110.1 12615944
AT4G14110.1 TraesCS2D01G300400.2 AT4G14110.1 12615944
AT4G14110.1 TraesCS7A01G315600.1 AT5G14250.1 11742986
AT4G14110.1 TraesCS7B01G216600.2 AT5G14250.1 11742986
AT4G14110.1 TraesCS7D01G312600.2 AT5G14250.1 11742986
AT4G14110.1 TraesCS7A01G315600.1 AT5G14250.1 12615944
AT4G14110.1 TraesCS7B01G216600.2 AT5G14250.1 12615944
AT4G14110.1 TraesCS7D01G312600.2 AT5G14250.1 12615944
AT4G14110.1 TraesCS4A01G041600.1 AT5G42970.1 12615944
AT4G14110.1 TraesCS4B01G262600.1 AT5G42970.1 12615944
AT4G14110.1 TraesCS4D01G262700.1 AT5G42970.1 12615944
AT4G14110.1 TraesCS5A01G425300.1 AT5G46210.1 16844902
AT4G14110.1 TraesCS5B01G427400.1 AT5G46210.1 16844902
AT4G14110.1 TraesCS5D01G433700.3 AT5G46210.1 16844902
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G301900.1 Wheat golgi 56.35 92.86
HORVU2Hr1G074740.2 Barley cytosol 49.85 82.14
HORVU2Hr1G074780.1 Barley mitochondrion, plastid 56.35 81.98
Os04t0428900-01 Rice cytosol 48.61 80.1
Zm00001d003685_P001 Maize extracellular 46.75 77.04
OQU81583 Sorghum cytosol 46.75 77.04
Zm00001d025407_P001 Maize cytosol 46.44 76.53
GSMUA_Achr2P20500_001 Banana cytosol 37.77 61.93
Solyc01g104600.2.1 Tomato cytosol 36.22 59.39
PGSC0003DMT400076584 Potato cytosol 34.98 57.36
VIT_12s0055g00390.t01 Wine grape cytosol 34.67 56.85
KRH43983 Soybean cytosol 34.67 56.85
KRH10462 Soybean cytosol 34.37 56.35
CDY01192 Canola cytosol 34.06 55.84
CDY12369 Canola cytosol 33.75 55.33
Bra038444.1-P Field mustard cytosol 33.75 55.33
KRH33363 Soybean cytosol 30.96 54.95
AT4G14110.1 Thale cress cytosol 33.44 54.82
CDY27125 Canola cytosol 33.44 54.82
CDY12734 Canola cytosol 34.67 51.38
Bra032760.1-P Field mustard cytosol 34.37 50.23
Protein Annotations
Gene3D:1.25.40.990MapMan:19.2.3.3.1.8InterPro:COP9_CSN8InterPro:CSN8_PSD8_EIF3Kncoils:CoilGO:GO:0000338
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006464GO:GO:0008150
GO:GO:0008152GO:GO:0008180GO:GO:0009987GO:GO:0010387GO:GO:0016043GO:GO:0019538
InterPro:IPR000717InterPro:PCI_domPFAM:PF10075PFscan:PS50250PANTHER:PTHR13339EnsemblPlantsGene:TraesCS2D01G300400
EnsemblPlants:TraesCS2D01G300400.2SEG:seg::::
Description
No Description!
Coordinates
chr2D:-:382455047..382459157
Molecular Weight (calculated)
21563.6 Da
IEP (calculated)
5.590
GRAVY (calculated)
-0.064
Length
323 amino acids
Sequence
(BLAST)
001: MDLSAVHAAL SAKSYSAIAT LCDDLFLQVA SRGVATDDWP YAVHLLGHLY LNDLNSARFL WKTVPQEVKD AHPELGAIWK IGQCLWNRDY AGVYTSAQGF
101: EWGPEISDFV TAFLESYRKR IFELLTSAYT TISIADVAHF MGMSEEDATN YAVQNGWSLD VATKMLTVRK QKPQTNQKLD ASKLQRLTEC VXXXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXF
Best Arabidopsis Sequence Match ( AT4G14110.1 )
(BLAST)
001: MDLSPVKEAL AAKSFDKIAD ICDTLMLQVA SEGIEYHDDW PYAIHLLGYF YVDDCDSARF LWKRIPTAIK ERKPEVVAAW GIGQKLWTHD YAGVYEAIRG
101: YDWSQEAKDM VAAFSDLYTK RMFQLLLSAY STITIHDLAL FLGMTEDDAT TYVVENGWTV DAASQMASVK KQAVKREQKV DSSKLQRLTE YVFHLEH
Arabidopsis Description
CSN8COP9 signalosome complex subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:P43255]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.