Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01192 | Canola | cytosol | 89.85 | 89.85 |
| CDY12369 | Canola | cytosol | 87.82 | 87.82 |
| Bra038444.1-P | Field mustard | cytosol | 87.31 | 87.31 |
| CDY27125 | Canola | cytosol | 87.31 | 87.31 |
| CDY12734 | Canola | cytosol | 90.36 | 81.65 |
| Bra032760.1-P | Field mustard | cytosol | 90.36 | 80.54 |
| KRH43983 | Soybean | cytosol | 72.08 | 72.08 |
| VIT_12s0055g00390.t01 | Wine grape | cytosol | 71.07 | 71.07 |
| PGSC0003DMT400076584 | Potato | cytosol | 70.56 | 70.56 |
| KRH10462 | Soybean | cytosol | 69.04 | 69.04 |
| Solyc01g104600.2.1 | Tomato | cytosol | 68.53 | 68.53 |
| KRH33363 | Soybean | cytosol | 59.39 | 64.29 |
| GSMUA_Achr2P20500_001 | Banana | cytosol | 62.94 | 62.94 |
| Os04t0428900-01 | Rice | cytosol | 57.36 | 57.65 |
| TraesCS2A01G301900.1 | Wheat | golgi | 55.84 | 56.12 |
| OQU81583 | Sorghum | cytosol | 52.28 | 52.55 |
| Zm00001d003685_P001 | Maize | extracellular | 52.28 | 52.55 |
| Zm00001d025407_P001 | Maize | cytosol | 51.27 | 51.53 |
| HORVU2Hr1G074740.2 | Barley | cytosol | 50.25 | 50.51 |
| HORVU2Hr1G074780.1 | Barley | mitochondrion, plastid | 56.35 | 50.0 |
| TraesCS2D01G300400.2 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 54.82 | 33.44 |
Protein Annotations
| Gene3D:1.25.40.990 | MapMan:19.2.3.3.1.8 | EntrezGene:827049 | ProteinID:AEE83376.1 | EMBL:AF395067 | EMBL:AK118535 |
| ArrayExpress:AT4G14110 | EnsemblPlantsGene:AT4G14110 | RefSeq:AT4G14110 | TAIR:AT4G14110 | RefSeq:AT4G14110-TAIR-G | EnsemblPlants:AT4G14110.1 |
| TAIR:AT4G14110.1 | Unigene:At.4252 | EMBL:BT006489 | ProteinID:CAB10190.1 | ProteinID:CAB78453.1 | Symbol:COP9 |
| InterPro:COP9_CSN8 | InterPro:CSN8_PSD8_EIF3K | GO:GO:0000338 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004222 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008180 | GO:GO:0009416 | GO:GO:0009585 | GO:GO:0009605 | GO:GO:0009628 |
| GO:GO:0009719 | GO:GO:0009753 | GO:GO:0009987 | GO:GO:0010017 | GO:GO:0010387 | GO:GO:0016043 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR000717 | EMBL:L32874 | RefSeq:NP_193147.1 | UniProt:P43255 |
| InterPro:PCI_dom | PFAM:PF10075 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50250 | PANTHER:PTHR13339 | UniProt:Q548D1 |
| UniParc:UPI0000000EF4 | : | : | : | : | : |
Description
CSN8COP9 signalosome complex subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:P43255]
Coordinates
chr4:-:8132880..8134988
Molecular Weight (calculated)
22547.8 Da
IEP (calculated)
4.925
GRAVY (calculated)
-0.206
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSPVKEAL AAKSFDKIAD ICDTLMLQVA SEGIEYHDDW PYAIHLLGYF YVDDCDSARF LWKRIPTAIK ERKPEVVAAW GIGQKLWTHD YAGVYEAIRG
101: YDWSQEAKDM VAAFSDLYTK RMFQLLLSAY STITIHDLAL FLGMTEDDAT TYVVENGWTV DAASQMASVK KQAVKREQKV DSSKLQRLTE YVFHLEH
101: YDWSQEAKDM VAAFSDLYTK RMFQLLLSAY STITIHDLAL FLGMTEDDAT TYVVENGWTV DAASQMASVK KQAVKREQKV DSSKLQRLTE YVFHLEH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.