Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G425300.1 | Wheat | cytosol | 88.29 | 99.72 |
| TraesCS5D01G433700.3 | Wheat | cytosol, plastid | 99.38 | 96.14 |
| HORVU5Hr1G103580.2 | Barley | plastid | 99.5 | 95.92 |
| KRH21073 | Soybean | cytosol | 32.88 | 92.31 |
| EER93338 | Sorghum | plastid | 90.91 | 87.53 |
| Zm00001d034361_P001 | Maize | cytosol, plastid | 89.91 | 86.78 |
| Zm00001d013116_P002 | Maize | plastid | 89.66 | 83.72 |
| GSMUA_Achr4P22850_001 | Banana | cytosol | 80.32 | 80.32 |
| KRH58640 | Soybean | cytosol | 76.59 | 79.35 |
| KRH11182 | Soybean | cytosol, plastid | 77.58 | 79.06 |
| Solyc02g021470.2.1 | Tomato | cytosol, nucleus, plastid | 77.21 | 78.98 |
| VIT_10s0003g03710.t01 | Wine grape | cytosol | 78.46 | 78.55 |
| KRH42547 | Soybean | cytosol | 74.84 | 78.15 |
| CDY33461 | Canola | cytosol | 73.72 | 77.79 |
| CDX77644 | Canola | cytosol | 74.22 | 77.71 |
| Bra025031.1-P | Field mustard | cytosol | 73.35 | 77.5 |
| CDY43957 | Canola | cytosol | 73.35 | 75.9 |
| Bra022023.1-P | Field mustard | plastid | 73.85 | 75.54 |
| CDX87735 | Canola | cytosol | 73.23 | 75.38 |
| CDY35152 | Canola | plastid | 73.47 | 75.06 |
| CDY03235 | Canola | plastid | 73.72 | 74.94 |
| Bra017569.1-P | Field mustard | plastid | 73.35 | 74.94 |
| AT5G46210.1 | Thale cress | cytosol | 73.23 | 74.24 |
| Solyc02g070460.2.1 | Tomato | plastid | 74.1 | 74.19 |
| GSMUA_Achr7P01270_001 | Banana | cytosol | 79.95 | 73.37 |
| KRH21072 | Soybean | plastid | 41.47 | 68.94 |
| TraesCS6B01G335200.1 | Wheat | cytosol | 36.86 | 40.22 |
| TraesCS2B01G550000.1 | Wheat | cytosol | 35.49 | 38.93 |
| TraesCS1B01G118000.1 | Wheat | cytosol | 30.01 | 32.39 |
| TraesCS1B01G117900.1 | Wheat | cytosol | 29.51 | 31.77 |
| TraesCS3B01G044500.1 | Wheat | cytosol | 26.65 | 28.84 |
| TraesCS3B01G497300.1 | Wheat | cytosol | 6.1 | 16.33 |
Protein Annotations
Description
No Description!
Coordinates
chr5B:+:603634894..603642989
Molecular Weight (calculated)
91335.7 Da
IEP (calculated)
8.358
GRAVY (calculated)
-0.331
Length
803 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKAKLPASS SSSAGPTEKS GLHLDPAAAA AVRAGGRTNG EEDAEMLLAD QDELRAPNAS APGGGTANLF RKKATLPQPP ATAATRKPLR IKIGQPKLPK
101: NFEEDTWAIL KDAITAIFLK QKLSCDVEKL YQAAGDLCLH KLGANLYERV KKECEIHISA KISALVGQSP DLVVFLSLVQ RTWQDFCDQM LIIRGIALLL
201: DVKYVKNVAN LCSVWDMGLQ LFRKHISLSP EIEHKTVTGL LRLIESERLG EAIDKTLLSH LLKMFTDLGM YSETFEKPFL ECTSEFYATE GVKYLQQSDI
301: PDYLKHAESR LQEEHDRCIL YLEANTRKPL IATTEKQLLQ RHTSAIIEKG FTVLMEANRV TDLSRMYTLF QRVDAIEMLK QALSLYIRGT GQGIIMDEEK
401: DKDLVPFLLE FKASLDKILE ESFAKNEAFS NTIKESFGHL INLRQNRPAE LIAKFLDEKL RAGNKGTSEE ELEGILDKVL VLFRFIQGKD VFEAFYKKDL
501: AKRLLLGKSA SIDAEKSMIT KLKTECGSQF TNKLEGMFKD IELSKEINDS FKQSSQARTK LPTGIEMSVH VLTTGYWPTY PPMDVKLPHE LNVYQDIFKE
601: FYLSKYSGRR LMWQNSLGHC VLKVEFPKGR KELAVSLFQS VVLMLFNDAQ KLSFVDIKES TGIEDKELRR TLQSLACGKV RVLQKTPKGR DIDDKDEFVF
701: NEDFSAPLYR IKVNAIQMKE TVEENTSTTE RVFQDRQYQV DAAIVRIMKT RKTLSHTLLI TELFQQLKFP IKPADMKKRI ESLIDREYLE RDRSNPQIYN
801: YLA
101: NFEEDTWAIL KDAITAIFLK QKLSCDVEKL YQAAGDLCLH KLGANLYERV KKECEIHISA KISALVGQSP DLVVFLSLVQ RTWQDFCDQM LIIRGIALLL
201: DVKYVKNVAN LCSVWDMGLQ LFRKHISLSP EIEHKTVTGL LRLIESERLG EAIDKTLLSH LLKMFTDLGM YSETFEKPFL ECTSEFYATE GVKYLQQSDI
301: PDYLKHAESR LQEEHDRCIL YLEANTRKPL IATTEKQLLQ RHTSAIIEKG FTVLMEANRV TDLSRMYTLF QRVDAIEMLK QALSLYIRGT GQGIIMDEEK
401: DKDLVPFLLE FKASLDKILE ESFAKNEAFS NTIKESFGHL INLRQNRPAE LIAKFLDEKL RAGNKGTSEE ELEGILDKVL VLFRFIQGKD VFEAFYKKDL
501: AKRLLLGKSA SIDAEKSMIT KLKTECGSQF TNKLEGMFKD IELSKEINDS FKQSSQARTK LPTGIEMSVH VLTTGYWPTY PPMDVKLPHE LNVYQDIFKE
601: FYLSKYSGRR LMWQNSLGHC VLKVEFPKGR KELAVSLFQS VVLMLFNDAQ KLSFVDIKES TGIEDKELRR TLQSLACGKV RVLQKTPKGR DIDDKDEFVF
701: NEDFSAPLYR IKVNAIQMKE TVEENTSTTE RVFQDRQYQV DAAIVRIMKT RKTLSHTLLI TELFQQLKFP IKPADMKKRI ESLIDREYLE RDRSNPQIYN
801: YLA
001: MSLPTKRSTF SAASASDDSS YSSPPMKKAK NDLHHSPQHP NTADKVVGFH MEEDPTPAAA NLSRKKATLP QPTKKFVIKL NKAKPTLPTN FEENTWEKLQ
101: SAIRAIFLKK KISFDLESLY QAVDNLCLHK LDGKLYDQIE KECEEHISAA LQSLVGQNTD LTVFLSRVEK CWQDFCDQML MIRSIALTLD RKYVIQNPNV
201: RSLWEMGLQL FRKHLSLAPE VEQRTVKGLL SMIEKERLAE AVNRTLLSHL LKMFTALGIY MESFEKPFLE GTSEFYAAEG MKYMQQSDVP EYLKHVEGRL
301: HEENERCILY IDAVTRKPLI TTVERQLLER HILVVLEKGF TTLMDGRRTE DLQRMQTLFS RVNALESLRQ ALSSYVRKTG QKIVMDEEKD KDMVQSLLDF
401: KASLDIIWEE SFYKNESFGN TIKDSFEHLI NLRQNRPAEL IAKFLDEKLR AGNKGTSEEE LESVLEKVLV LFRFIQGKDV FEAFYKKDLA KRLLLGKSAS
501: IDAEKSMISK LKTECGSQFT NKLEGMFKDI ELSKEINESF KQSSQARTKL PSGIEMSVHV LTTGYWPTYP PMDVKLPHEL NVYQDIFKEF YLSKYSGRRL
601: MWQNSLGHCV LKADFSKGKK ELAVSLFQAV VLMLFNDAMK LSFEDIKDST SIEDKELRRT LQSLACGKVR VLQKNPKGRD VEDGDEFEFN DEFAAPLYRI
701: KVNAIQMKET VEENTSTTER VFQDRQYQID AAIVRIMKTR KVLSHTLLIT ELFQQLKFPI KPADLKKRIE SLIDREYLER EKSNPQIYNY LA
101: SAIRAIFLKK KISFDLESLY QAVDNLCLHK LDGKLYDQIE KECEEHISAA LQSLVGQNTD LTVFLSRVEK CWQDFCDQML MIRSIALTLD RKYVIQNPNV
201: RSLWEMGLQL FRKHLSLAPE VEQRTVKGLL SMIEKERLAE AVNRTLLSHL LKMFTALGIY MESFEKPFLE GTSEFYAAEG MKYMQQSDVP EYLKHVEGRL
301: HEENERCILY IDAVTRKPLI TTVERQLLER HILVVLEKGF TTLMDGRRTE DLQRMQTLFS RVNALESLRQ ALSSYVRKTG QKIVMDEEKD KDMVQSLLDF
401: KASLDIIWEE SFYKNESFGN TIKDSFEHLI NLRQNRPAEL IAKFLDEKLR AGNKGTSEEE LESVLEKVLV LFRFIQGKDV FEAFYKKDLA KRLLLGKSAS
501: IDAEKSMISK LKTECGSQFT NKLEGMFKDI ELSKEINESF KQSSQARTKL PSGIEMSVHV LTTGYWPTYP PMDVKLPHEL NVYQDIFKEF YLSKYSGRRL
601: MWQNSLGHCV LKADFSKGKK ELAVSLFQAV VLMLFNDAMK LSFEDIKDST SIEDKELRRT LQSLACGKVR VLQKNPKGRD VEDGDEFEFN DEFAAPLYRI
701: KVNAIQMKET VEENTSTTER VFQDRQYQID AAIVRIMKTR KVLSHTLLIT ELFQQLKFPI KPADLKKRIE SLIDREYLER EKSNPQIYNY LA
Arabidopsis Description
CUL4Cullin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGH4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.