Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G419100.1 | Wheat | nucleus | 63.09 | 74.27 |
| TraesCS5A01G046900.1 | Wheat | golgi | 60.05 | 61.53 |
| TraesCS2A01G037800.2 | Wheat | cytosol, unclear | 59.25 | 60.71 |
| Os02t0167700-01 | Rice | plasma membrane | 58.21 | 59.69 |
| EES06334 | Sorghum | cytosol | 57.49 | 58.9 |
| Zm00001d053813_P002 | Maize | mitochondrion | 57.09 | 56.14 |
| GSMUA_Achr10P... | Banana | cytosol | 52.52 | 53.29 |
| Os02t0169800-01 | Rice | cytosol, plasma membrane | 13.37 | 53.18 |
| VIT_12s0035g01840.t01 | Wine grape | cytosol | 49.96 | 51.23 |
| Solyc01g103010.2.1 | Tomato | cytosol | 48.68 | 49.96 |
| AT2G02560.1 | Thale cress | cytosol | 47.64 | 48.81 |
| CDY09359 | Canola | cytosol | 47.48 | 48.73 |
| Bra026586.1-P | Field mustard | cytosol | 47.48 | 48.73 |
| CDY41685 | Canola | cytosol | 47.4 | 48.13 |
| Bra024815.1-P | Field mustard | cytosol | 47.0 | 48.0 |
| CDY45206 | Canola | cytosol | 46.52 | 47.86 |
| CDY03047 | Canola | cytosol | 46.76 | 47.6 |
| TraesCS5A01G409400.1 | Wheat | cytosol, extracellular | 0.56 | 5.0 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G409300.1 | EnsemblPlantsGene:TraesCS5A01G409300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:ARM-type_fold |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR12696 | PANTHER:PTHR12696:SF0 | PFAM:PF12937 |
| SEG:seg | SUPFAM:SSF48371 | SUPFAM:SSF81383 | MapMan:19.2.2.8.1.5 | : | : |
Description
No Description!
Coordinates
chr5A:+:598891958..598899131
Molecular Weight (calculated)
139019.0 Da
IEP (calculated)
5.113
GRAVY (calculated)
0.089
Length
1249 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLPLRRLSTA DISETETSPK RLRSGQASQE PHQAFSIKYL LFDILLHIQD PTTLLHASLV CKDWYKIISD PGFLNPFRKK QISQFVGFFG EFDGGDDIEF
0101: IPLPLPPEFA YVGKYLLTSF SGGLRNAQDI RGGSVLLKLE DSIAISNPFM KSFRTFPLAP PFRNIHGHHC GDFYLFNGDS VVRVVIIAMA NLLHIQLCVL
0201: ESSTWIEYRN TVDVGISLGE GPFCKTALCV NRFIYMLSID GFLVKVRMED CSASVIPLPN GSYEWRFQQI CRSNYSDFLY VHVDGFDIRI WSYLSDTWTP
0301: VFRIHVPSIF ACHIDIVESL NCIEWDTSRS GWGEFLTMYG VSDGVEHIIM GINGVEHLYL LDSINGTVTL IGSNEELIEI SPFVTSWIPS FLTLKEKSAE
0401: IEYECLDILG DVFDRSGNVI TKDHAYMLTA LLSQLSSTEA SVRKKTVSCI ASLAPCLSDD LLAKATLEAV QLLKKRRQKS EITRTNIQMI GALSCSVGYR
0501: FGPHLAEAVP LLISYCTSAS ENDEELRACS LQALESIMLR CPRDISPYYE GILNLALEYV SYDPNITDSM KEDAHGEVQD EEDDDESASE YKDDKNASWK
0601: VRQASAKCLS AIIVSCPQML FKMYQEACTK LINRFREREE NVKMDIFNTF IELLRQTGNV TKGQGDIDES SPRWLLKQEV PKVVKSIDSQ LYERSIKTKV
0701: GAFSVLKELV VLLPDCLADH LGSLVPWIEM YLNDKSYTSS LKIEALAFTR ILMAPHSPSV FHPYIQILCD AIVSAIGDIY YKVTADALRA CGELVRVLRP
0801: NFEARSINCR PYISPIYEAI WARLANQDQE VNECAISCMS LVIATFGDGL QRELPSCLSL LVDRMSYEIT RLTAVKAFAV LANSPLRIDL SCVLDRVVSD
0901: LTTFLRKANR ALRQATTGTL DSLVVTYGDQ IGLPSYETII AELSILISDI DLHMSVLALE LCRTIMVDRS SFQNVGLAVR HKVLPQALIL IRSALLQGRA
1001: LEALQKFFTA LVQSANTTFE TLLGSLISTA KQSQLGGLAK QALSSIAQCV AVLCLAAGDQ KCALTIEMLE GILNDVSSTD TAKQHIALLC LGEIGRRKDL
1101: SNHVQIENTV IESFQSPSEE IKSAASYALG NIAVGNLSKY LPFILDQIDN QQKNPYLLLH SLKEVIAWQS VDHTGQDELQ DSNIVKILAL LFNHCKSEDE
1201: GVQDVVAECL GKIALIEPNK LIPVLKECTS SPAANTRATV AIAIKYSIC
0101: IPLPLPPEFA YVGKYLLTSF SGGLRNAQDI RGGSVLLKLE DSIAISNPFM KSFRTFPLAP PFRNIHGHHC GDFYLFNGDS VVRVVIIAMA NLLHIQLCVL
0201: ESSTWIEYRN TVDVGISLGE GPFCKTALCV NRFIYMLSID GFLVKVRMED CSASVIPLPN GSYEWRFQQI CRSNYSDFLY VHVDGFDIRI WSYLSDTWTP
0301: VFRIHVPSIF ACHIDIVESL NCIEWDTSRS GWGEFLTMYG VSDGVEHIIM GINGVEHLYL LDSINGTVTL IGSNEELIEI SPFVTSWIPS FLTLKEKSAE
0401: IEYECLDILG DVFDRSGNVI TKDHAYMLTA LLSQLSSTEA SVRKKTVSCI ASLAPCLSDD LLAKATLEAV QLLKKRRQKS EITRTNIQMI GALSCSVGYR
0501: FGPHLAEAVP LLISYCTSAS ENDEELRACS LQALESIMLR CPRDISPYYE GILNLALEYV SYDPNITDSM KEDAHGEVQD EEDDDESASE YKDDKNASWK
0601: VRQASAKCLS AIIVSCPQML FKMYQEACTK LINRFREREE NVKMDIFNTF IELLRQTGNV TKGQGDIDES SPRWLLKQEV PKVVKSIDSQ LYERSIKTKV
0701: GAFSVLKELV VLLPDCLADH LGSLVPWIEM YLNDKSYTSS LKIEALAFTR ILMAPHSPSV FHPYIQILCD AIVSAIGDIY YKVTADALRA CGELVRVLRP
0801: NFEARSINCR PYISPIYEAI WARLANQDQE VNECAISCMS LVIATFGDGL QRELPSCLSL LVDRMSYEIT RLTAVKAFAV LANSPLRIDL SCVLDRVVSD
0901: LTTFLRKANR ALRQATTGTL DSLVVTYGDQ IGLPSYETII AELSILISDI DLHMSVLALE LCRTIMVDRS SFQNVGLAVR HKVLPQALIL IRSALLQGRA
1001: LEALQKFFTA LVQSANTTFE TLLGSLISTA KQSQLGGLAK QALSSIAQCV AVLCLAAGDQ KCALTIEMLE GILNDVSSTD TAKQHIALLC LGEIGRRKDL
1101: SNHVQIENTV IESFQSPSEE IKSAASYALG NIAVGNLSKY LPFILDQIDN QQKNPYLLLH SLKEVIAWQS VDHTGQDELQ DSNIVKILAL LFNHCKSEDE
1201: GVQDVVAECL GKIALIEPNK LIPVLKECTS SPAANTRATV AIAIKYSIC
0001: MANLQVSGIL EKFQMTGKDK DYRYMATSDL LNELNKDSFK IDLDLEVRLS SIILQQLDDV AGDVSGLAVK CLAPLVKKVG EERIVEMTNK LCDKLLHGKD
0101: QHRDTASIAL RTVVAQIAPT LAPSILVTLT PQMIGGISGQ GMSSGIKCEC LEIMCDVVQK YGSLMTDDHE KLLNTLLLQL GCNQATVRKK TVTCIASLAS
0201: SLSDDLLAKA TVEVVKNLSN RNAKSEITRT NIQMIGALCR AVGYRFGTHL GNTVPVLINY CTSASENDEE LREYSLQALE SFLLRCPRDI SPYCDEILNL
0301: TLEYISYDPN FTDNMEEDTD NETLEDEEDD ESANEYTDDE DASWKVRRAA AKCLAGLIVS RSEMLTKVYQ EACPKLIDRF KEREENVKMD VFNTFIDLLR
0401: QTGNVTKGQT DTDESSPKWL LKQEVSKIVK SINRQLREKS VKTKVGAFSV LRELVVVLPD CLADHIGSLV PGIERALNDK SSTSNLKIEA LVFTKLVLAS
0501: HAPPVFHPYI KALSSPVLAA VGERYYKVTA EALRVCGELV RVVRPSTAGM GFDFKPFVHP IYNAIMSRLT NQDQDQEVKE CAITCMGLVI STFGDQLRAE
0601: LPSCLPVLVD RMGNEITRLT AVKAFSVIAT SPLHINLSCV LDHLIAELTG FLRKANRVLR QATLITMNTL VTAYGDKIGS EAYEVILVEL SSLISVSDLH
0701: MTALALELCC TLMTGKSCSE NISLAVRNKV LPQALTLVKS PLLQGQALLD LQKFFEALVY HANTSFYTLL ESLLSCAKPS PQSGGVPKQA LYSIAQCVAV
0801: LCLAAGDKNC SSTVKMLMEI LKDDSGTNSA KQHLALLSLG EIGRRKDLSA HAGIETIVIE SFQSPFEEIK SAASYALGNI AVGNLSNYLP FILDQIDNQQ
0901: KKQYILLHSL KEVIVRQSVD KADFQNSSVE KILALLFNHC ESEEEGVRNV VAECLGKMAL IEPEKLVPAL QVRTTSPAAF TRATVVTAVK YSVVERPEKL
1001: DEIIFPQISS FLMLIKDGDR HVRRAAVSAL STFAHYKPNL IKGLLPELLP LLYDQTVIKK ELIRTVDLGP FKHVVDDGLE LRKAAFECVF TLVDSCLDQV
1101: NPSSFIVPFL KSGLEDHYDL KMLCHLILSL LADKCPSAVL AVLDSLVEPL HKTISFKPKQ DAVKQEHDRN EDMIRSALRA ISSLDRINGV DYSHKFKGLM
1201: GDMKRSVPLW EKFQTIRNE
0101: QHRDTASIAL RTVVAQIAPT LAPSILVTLT PQMIGGISGQ GMSSGIKCEC LEIMCDVVQK YGSLMTDDHE KLLNTLLLQL GCNQATVRKK TVTCIASLAS
0201: SLSDDLLAKA TVEVVKNLSN RNAKSEITRT NIQMIGALCR AVGYRFGTHL GNTVPVLINY CTSASENDEE LREYSLQALE SFLLRCPRDI SPYCDEILNL
0301: TLEYISYDPN FTDNMEEDTD NETLEDEEDD ESANEYTDDE DASWKVRRAA AKCLAGLIVS RSEMLTKVYQ EACPKLIDRF KEREENVKMD VFNTFIDLLR
0401: QTGNVTKGQT DTDESSPKWL LKQEVSKIVK SINRQLREKS VKTKVGAFSV LRELVVVLPD CLADHIGSLV PGIERALNDK SSTSNLKIEA LVFTKLVLAS
0501: HAPPVFHPYI KALSSPVLAA VGERYYKVTA EALRVCGELV RVVRPSTAGM GFDFKPFVHP IYNAIMSRLT NQDQDQEVKE CAITCMGLVI STFGDQLRAE
0601: LPSCLPVLVD RMGNEITRLT AVKAFSVIAT SPLHINLSCV LDHLIAELTG FLRKANRVLR QATLITMNTL VTAYGDKIGS EAYEVILVEL SSLISVSDLH
0701: MTALALELCC TLMTGKSCSE NISLAVRNKV LPQALTLVKS PLLQGQALLD LQKFFEALVY HANTSFYTLL ESLLSCAKPS PQSGGVPKQA LYSIAQCVAV
0801: LCLAAGDKNC SSTVKMLMEI LKDDSGTNSA KQHLALLSLG EIGRRKDLSA HAGIETIVIE SFQSPFEEIK SAASYALGNI AVGNLSNYLP FILDQIDNQQ
0901: KKQYILLHSL KEVIVRQSVD KADFQNSSVE KILALLFNHC ESEEEGVRNV VAECLGKMAL IEPEKLVPAL QVRTTSPAAF TRATVVTAVK YSVVERPEKL
1001: DEIIFPQISS FLMLIKDGDR HVRRAAVSAL STFAHYKPNL IKGLLPELLP LLYDQTVIKK ELIRTVDLGP FKHVVDDGLE LRKAAFECVF TLVDSCLDQV
1101: NPSSFIVPFL KSGLEDHYDL KMLCHLILSL LADKCPSAVL AVLDSLVEPL HKTISFKPKQ DAVKQEHDRN EDMIRSALRA ISSLDRINGV DYSHKFKGLM
1201: GDMKRSVPLW EKFQTIRNE
Arabidopsis Description
CAND1Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5Y6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.