Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G057500.1 | Wheat | cytosol | 83.22 | 72.44 |
| TraesCS2D01G036800.1 | Wheat | cytosol | 81.81 | 71.21 |
| Os02t0167700-01 | Rice | plasma membrane | 80.87 | 70.44 |
| EES06334 | Sorghum | cytosol | 79.55 | 69.24 |
| Zm00001d053813_P002 | Maize | mitochondrion | 78.7 | 65.75 |
| KRH75237 | Soybean | cytosol, endoplasmic reticulum, golgi, plastid | 20.08 | 65.54 |
| TraesCS5A01G409300.1 | Wheat | cytosol | 74.27 | 63.09 |
| GSMUA_Achr10P... | Banana | cytosol | 73.14 | 63.04 |
| VIT_12s0035g01840.t01 | Wine grape | cytosol | 70.78 | 61.66 |
| KRH01878 | Soybean | endoplasmic reticulum | 70.22 | 61.17 |
| KRH51281 | Soybean | endoplasmic reticulum | 70.12 | 61.13 |
| Solyc01g103010.2.1 | Tomato | cytosol | 68.61 | 59.82 |
| AT2G02560.1 | Thale cress | cytosol | 67.3 | 58.57 |
| CDY09359 | Canola | cytosol | 67.11 | 58.5 |
| Bra026586.1-P | Field mustard | cytosol | 67.11 | 58.5 |
| CDY41685 | Canola | cytosol | 66.92 | 57.72 |
| CDY45206 | Canola | cytosol | 65.98 | 57.66 |
| Bra024815.1-P | Field mustard | cytosol | 66.45 | 57.65 |
| CDY03047 | Canola | cytosol | 66.45 | 57.46 |
| Os02t0169800-01 | Rice | cytosol, plasma membrane | 13.29 | 44.9 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G419100.1 | EnsemblPlantsGene:TraesCS5D01G419100 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:TATA-bd_TIP120 | PANTHER:PTHR12696 | PANTHER:PTHR12696:SF0 | PFAM:PF08623 |
| SUPFAM:SSF48371 | MapMan:19.2.2.8.1.5 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:480422872..480435663
Molecular Weight (calculated)
117038.0 Da
IEP (calculated)
5.149
GRAVY (calculated)
0.105
Length
1061 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTETEMSRLL YALDVTKTAA IRAGLAGTPP GLQHQVFVGD ALDRSGNVIT KDHAYMLTAL LSQLSSTEAS VRKKAVSCIA SLAPCLSDDL LAKATLEAVQ
0101: LLKKRRQKSE ITRTNIQMID ALSFSVGYRF GPYLAEAVPL LISYCTSASE NDEELCACSL QALESIMLRC PRDISPYYEG ILNLALEYVS YDPNITDSMK
0201: EDAHSEVQDD ESASEYNADK NASWKVRRAS AKCLSAIIVS CPQMLFKMYQ EACPKLIDRF REREENVKMD IFNTFIELLR QTGNVTKGQG DIDESSPRWL
0301: LKQEVPKVVK SIDSQLYERS IKTKVGAFSV LKELVVLLPD CLADHLGSLV PWIEMYLNDK SYTSSLKIEA LAFTRILMAS HSPSVFHPYI QILCDAIVSA
0401: IGDIYYKVTA DALRRAGSYS GFSVQILRPY ISPIYEAIWA RLPNQDQEVS ECFVSCMSLV IATFGDGLQR ELPSCLSLLV DRMGYEITRL TAVKAFAVLA
0501: NSPLRIDLSC VLDRVVSDLA TFLRKDSRAL RQATTGTLNS LVVTYGDQIG LSSYETIIAE LSILISDIDL HMSVLVLELC RTIMVDRSSF QNVGLAVRHK
0601: VLPQALILIR SALLQGRALE ALQKFFTALV QSANTTFETL LDSLISTAKQ SQLGGLAKQA LSSIAQCVAV LCLAAGDQKC ALTIEMLEGI LNDDSSTDTA
0701: KQHIALLCLG EIGRRKDLSN HVQIENTVIE SFQSPFEEIK SAASYALRNI AVGNLSKYLP FILDQIDNQQ KNPYLLLHSL KEVIAWQSVD HTGQDELQDS
0801: NIVKILALLF NHCKSEDEGV QDVVAECLGK IALIEPNKLI PVLKECTSSP AANTRATVAI AIKYSIVERP GKIDAIMYSE ISTFLMLIKD SDMHVRRAAI
0901: LALSTAAHNK PNLIKGLVPE LLPLLYDQTV VKQELVRTVD LGPFEHVVDD GLELRKAAFE CVDTLLDSCL DQVNPSSFIV PFLLSGLGDH YDVKMPCHLI
1001: LSKLADKCPY AVLAVLDSLV EPLEETIGDK PTGDAVKREI DRNEDVIHSA LQAIAALSRI R
0101: LLKKRRQKSE ITRTNIQMID ALSFSVGYRF GPYLAEAVPL LISYCTSASE NDEELCACSL QALESIMLRC PRDISPYYEG ILNLALEYVS YDPNITDSMK
0201: EDAHSEVQDD ESASEYNADK NASWKVRRAS AKCLSAIIVS CPQMLFKMYQ EACPKLIDRF REREENVKMD IFNTFIELLR QTGNVTKGQG DIDESSPRWL
0301: LKQEVPKVVK SIDSQLYERS IKTKVGAFSV LKELVVLLPD CLADHLGSLV PWIEMYLNDK SYTSSLKIEA LAFTRILMAS HSPSVFHPYI QILCDAIVSA
0401: IGDIYYKVTA DALRRAGSYS GFSVQILRPY ISPIYEAIWA RLPNQDQEVS ECFVSCMSLV IATFGDGLQR ELPSCLSLLV DRMGYEITRL TAVKAFAVLA
0501: NSPLRIDLSC VLDRVVSDLA TFLRKDSRAL RQATTGTLNS LVVTYGDQIG LSSYETIIAE LSILISDIDL HMSVLVLELC RTIMVDRSSF QNVGLAVRHK
0601: VLPQALILIR SALLQGRALE ALQKFFTALV QSANTTFETL LDSLISTAKQ SQLGGLAKQA LSSIAQCVAV LCLAAGDQKC ALTIEMLEGI LNDDSSTDTA
0701: KQHIALLCLG EIGRRKDLSN HVQIENTVIE SFQSPFEEIK SAASYALRNI AVGNLSKYLP FILDQIDNQQ KNPYLLLHSL KEVIAWQSVD HTGQDELQDS
0801: NIVKILALLF NHCKSEDEGV QDVVAECLGK IALIEPNKLI PVLKECTSSP AANTRATVAI AIKYSIVERP GKIDAIMYSE ISTFLMLIKD SDMHVRRAAI
0901: LALSTAAHNK PNLIKGLVPE LLPLLYDQTV VKQELVRTVD LGPFEHVVDD GLELRKAAFE CVDTLLDSCL DQVNPSSFIV PFLLSGLGDH YDVKMPCHLI
1001: LSKLADKCPY AVLAVLDSLV EPLEETIGDK PTGDAVKREI DRNEDVIHSA LQAIAALSRI R
0001: MANLQVSGIL EKFQMTGKDK DYRYMATSDL LNELNKDSFK IDLDLEVRLS SIILQQLDDV AGDVSGLAVK CLAPLVKKVG EERIVEMTNK LCDKLLHGKD
0101: QHRDTASIAL RTVVAQIAPT LAPSILVTLT PQMIGGISGQ GMSSGIKCEC LEIMCDVVQK YGSLMTDDHE KLLNTLLLQL GCNQATVRKK TVTCIASLAS
0201: SLSDDLLAKA TVEVVKNLSN RNAKSEITRT NIQMIGALCR AVGYRFGTHL GNTVPVLINY CTSASENDEE LREYSLQALE SFLLRCPRDI SPYCDEILNL
0301: TLEYISYDPN FTDNMEEDTD NETLEDEEDD ESANEYTDDE DASWKVRRAA AKCLAGLIVS RSEMLTKVYQ EACPKLIDRF KEREENVKMD VFNTFIDLLR
0401: QTGNVTKGQT DTDESSPKWL LKQEVSKIVK SINRQLREKS VKTKVGAFSV LRELVVVLPD CLADHIGSLV PGIERALNDK SSTSNLKIEA LVFTKLVLAS
0501: HAPPVFHPYI KALSSPVLAA VGERYYKVTA EALRVCGELV RVVRPSTAGM GFDFKPFVHP IYNAIMSRLT NQDQDQEVKE CAITCMGLVI STFGDQLRAE
0601: LPSCLPVLVD RMGNEITRLT AVKAFSVIAT SPLHINLSCV LDHLIAELTG FLRKANRVLR QATLITMNTL VTAYGDKIGS EAYEVILVEL SSLISVSDLH
0701: MTALALELCC TLMTGKSCSE NISLAVRNKV LPQALTLVKS PLLQGQALLD LQKFFEALVY HANTSFYTLL ESLLSCAKPS PQSGGVPKQA LYSIAQCVAV
0801: LCLAAGDKNC SSTVKMLMEI LKDDSGTNSA KQHLALLSLG EIGRRKDLSA HAGIETIVIE SFQSPFEEIK SAASYALGNI AVGNLSNYLP FILDQIDNQQ
0901: KKQYILLHSL KEVIVRQSVD KADFQNSSVE KILALLFNHC ESEEEGVRNV VAECLGKMAL IEPEKLVPAL QVRTTSPAAF TRATVVTAVK YSVVERPEKL
1001: DEIIFPQISS FLMLIKDGDR HVRRAAVSAL STFAHYKPNL IKGLLPELLP LLYDQTVIKK ELIRTVDLGP FKHVVDDGLE LRKAAFECVF TLVDSCLDQV
1101: NPSSFIVPFL KSGLEDHYDL KMLCHLILSL LADKCPSAVL AVLDSLVEPL HKTISFKPKQ DAVKQEHDRN EDMIRSALRA ISSLDRINGV DYSHKFKGLM
1201: GDMKRSVPLW EKFQTIRNE
0101: QHRDTASIAL RTVVAQIAPT LAPSILVTLT PQMIGGISGQ GMSSGIKCEC LEIMCDVVQK YGSLMTDDHE KLLNTLLLQL GCNQATVRKK TVTCIASLAS
0201: SLSDDLLAKA TVEVVKNLSN RNAKSEITRT NIQMIGALCR AVGYRFGTHL GNTVPVLINY CTSASENDEE LREYSLQALE SFLLRCPRDI SPYCDEILNL
0301: TLEYISYDPN FTDNMEEDTD NETLEDEEDD ESANEYTDDE DASWKVRRAA AKCLAGLIVS RSEMLTKVYQ EACPKLIDRF KEREENVKMD VFNTFIDLLR
0401: QTGNVTKGQT DTDESSPKWL LKQEVSKIVK SINRQLREKS VKTKVGAFSV LRELVVVLPD CLADHIGSLV PGIERALNDK SSTSNLKIEA LVFTKLVLAS
0501: HAPPVFHPYI KALSSPVLAA VGERYYKVTA EALRVCGELV RVVRPSTAGM GFDFKPFVHP IYNAIMSRLT NQDQDQEVKE CAITCMGLVI STFGDQLRAE
0601: LPSCLPVLVD RMGNEITRLT AVKAFSVIAT SPLHINLSCV LDHLIAELTG FLRKANRVLR QATLITMNTL VTAYGDKIGS EAYEVILVEL SSLISVSDLH
0701: MTALALELCC TLMTGKSCSE NISLAVRNKV LPQALTLVKS PLLQGQALLD LQKFFEALVY HANTSFYTLL ESLLSCAKPS PQSGGVPKQA LYSIAQCVAV
0801: LCLAAGDKNC SSTVKMLMEI LKDDSGTNSA KQHLALLSLG EIGRRKDLSA HAGIETIVIE SFQSPFEEIK SAASYALGNI AVGNLSNYLP FILDQIDNQQ
0901: KKQYILLHSL KEVIVRQSVD KADFQNSSVE KILALLFNHC ESEEEGVRNV VAECLGKMAL IEPEKLVPAL QVRTTSPAAF TRATVVTAVK YSVVERPEKL
1001: DEIIFPQISS FLMLIKDGDR HVRRAAVSAL STFAHYKPNL IKGLLPELLP LLYDQTVIKK ELIRTVDLGP FKHVVDDGLE LRKAAFECVF TLVDSCLDQV
1101: NPSSFIVPFL KSGLEDHYDL KMLCHLILSL LADKCPSAVL AVLDSLVEPL HKTISFKPKQ DAVKQEHDRN EDMIRSALRA ISSLDRINGV DYSHKFKGLM
1201: GDMKRSVPLW EKFQTIRNE
Arabidopsis Description
CAND1Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5Y6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.