Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053813_P002 | Maize | mitochondrion | 97.95 | 94.02 |
| Os02t0167700-01 | Rice | plasma membrane | 93.03 | 93.1 |
| HORVU5Hr1G011280.4 | Barley | cytosol, endoplasmic reticulum, peroxisome | 48.15 | 92.3 |
| TraesCS5D01G057500.1 | Wheat | cytosol | 91.8 | 91.8 |
| TraesCS5A01G046900.1 | Wheat | golgi | 91.47 | 91.47 |
| TraesCS5B01G051900.1 | Wheat | cytosol | 91.3 | 91.3 |
| HORVU2Hr1G005650.6 | Barley | cytosol | 90.16 | 90.16 |
| TraesCS2A01G037800.2 | Wheat | cytosol, unclear | 89.83 | 89.83 |
| TraesCS2D01G036800.1 | Wheat | cytosol | 89.75 | 89.75 |
| TraesCS2B01G051000.1 | Wheat | cytosol, golgi | 89.5 | 89.5 |
| HORVU0Hr1G010280.1 | Barley | plastid | 7.38 | 84.91 |
| HORVU7Hr1G036210.1 | Barley | endoplasmic reticulum, plastid | 4.84 | 84.29 |
| GSMUA_Achr10P... | Banana | cytosol | 84.74 | 83.92 |
| Os02t0169800-01 | Rice | cytosol, plasma membrane | 21.49 | 83.44 |
| HORVU1Hr1G041480.1 | Barley | cytosol | 5.99 | 82.02 |
| VIT_12s0035g01840.t01 | Wine grape | cytosol | 81.79 | 81.86 |
| HORVU5Hr1G059250.1 | Barley | cytosol | 4.68 | 81.43 |
| KRH51281 | Soybean | endoplasmic reticulum | 81.05 | 81.18 |
| KRH01878 | Soybean | endoplasmic reticulum | 80.8 | 80.87 |
| TraesCS5D01G419100.1 | Wheat | nucleus | 69.24 | 79.55 |
| Solyc01g103010.2.1 | Tomato | cytosol | 78.84 | 78.96 |
| HORVU1Hr1G041490.1 | Barley | cytosol | 3.61 | 77.19 |
| AT2G02560.1 | Thale cress | cytosol | 76.87 | 76.87 |
| CDY09359 | Canola | cytosol | 76.7 | 76.83 |
| Bra026586.1-P | Field mustard | cytosol | 76.7 | 76.83 |
| CDY45206 | Canola | cytosol | 75.64 | 75.95 |
| CDY41685 | Canola | cytosol | 76.54 | 75.85 |
| Bra024815.1-P | Field mustard | cytosol | 75.96 | 75.72 |
| CDY03047 | Canola | cytosol | 76.13 | 75.63 |
| KRH75237 | Soybean | cytosol, endoplasmic reticulum, golgi, plastid | 19.28 | 72.31 |
| TraesCS5A01G409300.1 | Wheat | cytosol | 58.9 | 57.49 |
Protein Annotations
| MapMan:19.2.2.8.1.5 | EntrezGene:8074696 | InterPro:ARM-type_fold | UniProt:C5XVJ1 | EnsemblPlants:EES06334 | ProteinID:EES06334 |
| ProteinID:EES06334.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005618 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 |
| GO:GO:0006464 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009719 | GO:GO:0009733 |
| GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010051 | GO:GO:0010228 | GO:GO:0010265 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016567 | GO:GO:0019538 | GO:GO:0030312 | PFAM:PF08623 | PANTHER:PTHR12696 |
| PANTHER:PTHR12696:SF0 | EnsemblPlantsGene:SORBI_3004G053500 | SUPFAM:SSF48371 | unigene:Sbi.5856 | InterPro:TATA-bd_TIP120 | UniParc:UPI0001A85AC6 |
| RefSeq:XP_002453358.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:4351658..4361896
Molecular Weight (calculated)
134316.0 Da
IEP (calculated)
6.058
GRAVY (calculated)
-0.043
Length
1219 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANLNITNIL EKMTGKDKDY RYMATSDLLS ELNKESFKAD QDLEPKLTIT VLQQLEDASG DVSGLAVKCL APLVKKVGED RVVEMTNKLC DKLINGKDQH
0101: RDTASIALKT IIAEVTTPSL AEKILLSLAP QLIKGVNTAK GAEIKCECLD ILADVLHRFG NLITKDHEYM LTALLSQLGS NQASVRKKSI SCIASLAPSL
0201: SDDLLAKATL QVVQLLKNRG AKSEITRTNI QMIGSLSRSV GYRFGPHLAE TVPLLISYCT SASENDEELR EYSLQALESF MLRCPRDISP YCEGILNLAL
0301: EYVSYDPNFT DSMDEDTDEE GQEEDDDDES ANEYTDDEDA SWKVRRASAK CLSAIIVSRP EMLSKMYLEA CPKLIERFRE REENVKMDIF NTFIELLRQT
0401: CNVTKGQGDI DESSPRWLLK QEVPKVVKSI NRQLREKSIK TKVGAFSVLK ELVVVLPDCL ADHFGSLVPG IEKALNDKSS TSNLKIEALV FTRLVMASHS
0501: PSVFHPYIKA LSAPILSAIG DRYYKVTAEA LRVCGELVRV LRPNLETSSV DFRPYSGPIY NAILGRLANQ DQDQEVKECA ISCMSLVVST FGDGLQRELP
0601: ACLPILVDRM GNEITRLTAV KAFSVIANSP LRIDLSCVLD HVVSELTAFL RKANRALRQA TLGTLNSLVV TYGGQIGSSS YETIIAELST LISDMDLHMT
0701: ALALELCCTI MVDRKSIKNV GLAVRNKVLP QALVLIRSAL LQGQALQALQ RFFASLVQSA NTSFDALLDS LISAAKPSQS GSLAKQALSS IAKCVAVLCL
0801: AAGDQKCAST IEMLKGILKD DSTTNSAKQH MALLCLGEIG RRKDLSNHVQ IENIVIESFQ SPFEEIKSAA SYALGNIAVG NLSKYLPFIL DQIDNQQKKQ
0901: YLLLHSLKEV IVRQSVDHAG QSELQDSNIE KILALLFNHC ESEEEGVRNV VAECLGKIAL IEPKKLVPAL KVRTSSPAAN TRATVAIAIK YSIVERPEKI
1001: DEIMYSEIST FLMLIKDSDR HVRRAAVLAL STAAHNKPNL IKGLLPELLP LLYDQTVIKQ ELIRTVDLGP FKHVVDDGLE LRKAAFECVD TLLDSCLDQV
1101: NPSSFIVPFL LSGLGDHYDV KMPCHLILSK LADKCPSAVL AVLDSIVEPI EKTISHKPKG DAVKQEVDRN EDMIRSALRS ISSLSRISGS DYSIRFKNLM
1201: NKITTTPALA EKYNSVRSE
0101: RDTASIALKT IIAEVTTPSL AEKILLSLAP QLIKGVNTAK GAEIKCECLD ILADVLHRFG NLITKDHEYM LTALLSQLGS NQASVRKKSI SCIASLAPSL
0201: SDDLLAKATL QVVQLLKNRG AKSEITRTNI QMIGSLSRSV GYRFGPHLAE TVPLLISYCT SASENDEELR EYSLQALESF MLRCPRDISP YCEGILNLAL
0301: EYVSYDPNFT DSMDEDTDEE GQEEDDDDES ANEYTDDEDA SWKVRRASAK CLSAIIVSRP EMLSKMYLEA CPKLIERFRE REENVKMDIF NTFIELLRQT
0401: CNVTKGQGDI DESSPRWLLK QEVPKVVKSI NRQLREKSIK TKVGAFSVLK ELVVVLPDCL ADHFGSLVPG IEKALNDKSS TSNLKIEALV FTRLVMASHS
0501: PSVFHPYIKA LSAPILSAIG DRYYKVTAEA LRVCGELVRV LRPNLETSSV DFRPYSGPIY NAILGRLANQ DQDQEVKECA ISCMSLVVST FGDGLQRELP
0601: ACLPILVDRM GNEITRLTAV KAFSVIANSP LRIDLSCVLD HVVSELTAFL RKANRALRQA TLGTLNSLVV TYGGQIGSSS YETIIAELST LISDMDLHMT
0701: ALALELCCTI MVDRKSIKNV GLAVRNKVLP QALVLIRSAL LQGQALQALQ RFFASLVQSA NTSFDALLDS LISAAKPSQS GSLAKQALSS IAKCVAVLCL
0801: AAGDQKCAST IEMLKGILKD DSTTNSAKQH MALLCLGEIG RRKDLSNHVQ IENIVIESFQ SPFEEIKSAA SYALGNIAVG NLSKYLPFIL DQIDNQQKKQ
0901: YLLLHSLKEV IVRQSVDHAG QSELQDSNIE KILALLFNHC ESEEEGVRNV VAECLGKIAL IEPKKLVPAL KVRTSSPAAN TRATVAIAIK YSIVERPEKI
1001: DEIMYSEIST FLMLIKDSDR HVRRAAVLAL STAAHNKPNL IKGLLPELLP LLYDQTVIKQ ELIRTVDLGP FKHVVDDGLE LRKAAFECVD TLLDSCLDQV
1101: NPSSFIVPFL LSGLGDHYDV KMPCHLILSK LADKCPSAVL AVLDSIVEPI EKTISHKPKG DAVKQEVDRN EDMIRSALRS ISSLSRISGS DYSIRFKNLM
1201: NKITTTPALA EKYNSVRSE
0001: MANLQVSGIL EKMTGKDKDY RYMATSDLLN ELNKDSFKID LDLEVRLSSI ILQQLDDVAG DVSGLAVKCL APLVKKVGEE RIVEMTNKLC DKLLHGKDQH
0101: RDTASIALRT VVAQIAPTLA PSILVTLTPQ MIGGISGQGM SSGIKCECLE IMCDVVQKYG SLMTDDHEKL LNTLLLQLGC NQATVRKKTV TCIASLASSL
0201: SDDLLAKATV EVVKNLSNRN AKSEITRTNI QMIGALCRAV GYRFGTHLGN TVPVLINYCT SASENDEELR EYSLQALESF LLRCPRDISP YCDEILNLTL
0301: EYISYDPNFT DNMEEDTDNE TLEDEEDDES ANEYTDDEDA SWKVRRAAAK CLAGLIVSRS EMLTKVYQEA CPKLIDRFKE REENVKMDVF NTFIDLLRQT
0401: GNVTKGQTDT DESSPKWLLK QEVSKIVKSI NRQLREKSVK TKVGAFSVLR ELVVVLPDCL ADHIGSLVPG IERALNDKSS TSNLKIEALV FTKLVLASHA
0501: PPVFHPYIKA LSSPVLAAVG ERYYKVTAEA LRVCGELVRV VRPSTAGMGF DFKPFVHPIY NAIMSRLTNQ DQDQEVKECA ITCMGLVIST FGDQLRAELP
0601: SCLPVLVDRM GNEITRLTAV KAFSVIATSP LHINLSCVLD HLIAELTGFL RKANRVLRQA TLITMNTLVT AYGDKIGSEA YEVILVELSS LISVSDLHMT
0701: ALALELCCTL MTGKSCSENI SLAVRNKVLP QALTLVKSPL LQGQALLDLQ KFFEALVYHA NTSFYTLLES LLSCAKPSPQ SGGVPKQALY SIAQCVAVLC
0801: LAAGDKNCSS TVKMLMEILK DDSGTNSAKQ HLALLSLGEI GRRKDLSAHA GIETIVIESF QSPFEEIKSA ASYALGNIAV GNLSNYLPFI LDQIDNQQKK
0901: QYILLHSLKE VIVRQSVDKA DFQNSSVEKI LALLFNHCES EEEGVRNVVA ECLGKMALIE PEKLVPALQV RTTSPAAFTR ATVVTAVKYS VVERPEKLDE
1001: IIFPQISSFL MLIKDGDRHV RRAAVSALST FAHYKPNLIK GLLPELLPLL YDQTVIKKEL IRTVDLGPFK HVVDDGLELR KAAFECVFTL VDSCLDQVNP
1101: SSFIVPFLKS GLEDHYDLKM LCHLILSLLA DKCPSAVLAV LDSLVEPLHK TISFKPKQDA VKQEHDRNED MIRSALRAIS SLDRINGVDY SHKFKGLMGD
1201: MKRSVPLWEK FQTIRNE
0101: RDTASIALRT VVAQIAPTLA PSILVTLTPQ MIGGISGQGM SSGIKCECLE IMCDVVQKYG SLMTDDHEKL LNTLLLQLGC NQATVRKKTV TCIASLASSL
0201: SDDLLAKATV EVVKNLSNRN AKSEITRTNI QMIGALCRAV GYRFGTHLGN TVPVLINYCT SASENDEELR EYSLQALESF LLRCPRDISP YCDEILNLTL
0301: EYISYDPNFT DNMEEDTDNE TLEDEEDDES ANEYTDDEDA SWKVRRAAAK CLAGLIVSRS EMLTKVYQEA CPKLIDRFKE REENVKMDVF NTFIDLLRQT
0401: GNVTKGQTDT DESSPKWLLK QEVSKIVKSI NRQLREKSVK TKVGAFSVLR ELVVVLPDCL ADHIGSLVPG IERALNDKSS TSNLKIEALV FTKLVLASHA
0501: PPVFHPYIKA LSSPVLAAVG ERYYKVTAEA LRVCGELVRV VRPSTAGMGF DFKPFVHPIY NAIMSRLTNQ DQDQEVKECA ITCMGLVIST FGDQLRAELP
0601: SCLPVLVDRM GNEITRLTAV KAFSVIATSP LHINLSCVLD HLIAELTGFL RKANRVLRQA TLITMNTLVT AYGDKIGSEA YEVILVELSS LISVSDLHMT
0701: ALALELCCTL MTGKSCSENI SLAVRNKVLP QALTLVKSPL LQGQALLDLQ KFFEALVYHA NTSFYTLLES LLSCAKPSPQ SGGVPKQALY SIAQCVAVLC
0801: LAAGDKNCSS TVKMLMEILK DDSGTNSAKQ HLALLSLGEI GRRKDLSAHA GIETIVIESF QSPFEEIKSA ASYALGNIAV GNLSNYLPFI LDQIDNQQKK
0901: QYILLHSLKE VIVRQSVDKA DFQNSSVEKI LALLFNHCES EEEGVRNVVA ECLGKMALIE PEKLVPALQV RTTSPAAFTR ATVVTAVKYS VVERPEKLDE
1001: IIFPQISSFL MLIKDGDRHV RRAAVSALST FAHYKPNLIK GLLPELLPLL YDQTVIKKEL IRTVDLGPFK HVVDDGLELR KAAFECVFTL VDSCLDQVNP
1101: SSFIVPFLKS GLEDHYDLKM LCHLILSLLA DKCPSAVLAV LDSLVEPLHK TISFKPKQDA VKQEHDRNED MIRSALRAIS SLDRINGVDY SHKFKGLMGD
1201: MKRSVPLWEK FQTIRNE
Arabidopsis Description
CAND1Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5Y6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.