Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G041480.1 | Barley | cytosol | 66.67 | 42.7 |
| HORVU0Hr1G010280.1 | Barley | plastid | 36.84 | 19.81 |
| Os02t0169800-01 | Rice | cytosol, plasma membrane | 82.46 | 14.97 |
| HORVU5Hr1G059250.1 | Barley | cytosol | 15.79 | 12.86 |
| TraesCS5B01G051900.1 | Wheat | cytosol | 96.49 | 4.51 |
| TraesCS5D01G057500.1 | Wheat | cytosol | 92.98 | 4.35 |
| TraesCS5A01G046900.1 | Wheat | golgi | 92.98 | 4.35 |
| HORVU2Hr1G005650.6 | Barley | cytosol | 91.23 | 4.27 |
| Os02t0167700-01 | Rice | plasma membrane | 82.46 | 3.86 |
| EES06334 | Sorghum | cytosol | 77.19 | 3.61 |
| Zm00001d053813_P002 | Maize | mitochondrion | 75.44 | 3.39 |
| GSMUA_Achr10P... | Banana | cytosol | 71.93 | 3.33 |
| VIT_12s0035g01840.t01 | Wine grape | cytosol | 64.91 | 3.04 |
| Solyc01g103010.2.1 | Tomato | cytosol | 63.16 | 2.96 |
| CDY09359 | Canola | cytosol | 47.37 | 2.22 |
| Bra026586.1-P | Field mustard | cytosol | 47.37 | 2.22 |
| CDY41685 | Canola | cytosol | 47.37 | 2.2 |
| AT2G02560.1 | Thale cress | cytosol | 45.61 | 2.13 |
| CDY03047 | Canola | cytosol | 43.86 | 2.04 |
| CDY45206 | Canola | cytosol | 42.11 | 1.98 |
| Bra024815.1-P | Field mustard | cytosol | 42.11 | 1.96 |
| HORVU7Hr1G036210.1 | Barley | endoplasmic reticulum, plastid | 0.0 | 0.0 |
| HORVU5Hr1G011280.4 | Barley | cytosol, endoplasmic reticulum, peroxisome | 0.0 | 0.0 |
| HORVU2Hr1G069270.2 | Barley | mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G041490.1 | EnsemblPlantsGene:HORVU1Hr1G041490 | Gene3D:1.25.10.10 | InterPro:ARM-like | InterPro:IPR011989 | SEG:seg |
| UniParc:UPI000B47B12C | UniProt:A0A287F9N4 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:296330015..296330628
Molecular Weight (calculated)
6128.5 Da
IEP (calculated)
6.491
GRAVY (calculated)
0.314
Length
57 amino acids
Sequence
(BLAST)
(BLAST)
1: LAPQLINGVT NGKSAEIKCE CLDILGDVLH RFGNVIMKDH AFMLTALLTQ LSSTQAS
0001: MANLQVSGIL EKFQMTGKDK DYRYMATSDL LNELNKDSFK IDLDLEVRLS SIILQQLDDV AGDVSGLAVK CLAPLVKKVG EERIVEMTNK LCDKLLHGKD
0101: QHRDTASIAL RTVVAQIAPT LAPSILVTLT PQMIGGISGQ GMSSGIKCEC LEIMCDVVQK YGSLMTDDHE KLLNTLLLQL GCNQATVRKK TVTCIASLAS
0201: SLSDDLLAKA TVEVVKNLSN RNAKSEITRT NIQMIGALCR AVGYRFGTHL GNTVPVLINY CTSASENDEE LREYSLQALE SFLLRCPRDI SPYCDEILNL
0301: TLEYISYDPN FTDNMEEDTD NETLEDEEDD ESANEYTDDE DASWKVRRAA AKCLAGLIVS RSEMLTKVYQ EACPKLIDRF KEREENVKMD VFNTFIDLLR
0401: QTGNVTKGQT DTDESSPKWL LKQEVSKIVK SINRQLREKS VKTKVGAFSV LRELVVVLPD CLADHIGSLV PGIERALNDK SSTSNLKIEA LVFTKLVLAS
0501: HAPPVFHPYI KALSSPVLAA VGERYYKVTA EALRVCGELV RVVRPSTAGM GFDFKPFVHP IYNAIMSRLT NQDQDQEVKE CAITCMGLVI STFGDQLRAE
0601: LPSCLPVLVD RMGNEITRLT AVKAFSVIAT SPLHINLSCV LDHLIAELTG FLRKANRVLR QATLITMNTL VTAYGDKIGS EAYEVILVEL SSLISVSDLH
0701: MTALALELCC TLMTGKSCSE NISLAVRNKV LPQALTLVKS PLLQGQALLD LQKFFEALVY HANTSFYTLL ESLLSCAKPS PQSGGVPKQA LYSIAQCVAV
0801: LCLAAGDKNC SSTVKMLMEI LKDDSGTNSA KQHLALLSLG EIGRRKDLSA HAGIETIVIE SFQSPFEEIK SAASYALGNI AVGNLSNYLP FILDQIDNQQ
0901: KKQYILLHSL KEVIVRQSVD KADFQNSSVE KILALLFNHC ESEEEGVRNV VAECLGKMAL IEPEKLVPAL QVRTTSPAAF TRATVVTAVK YSVVERPEKL
1001: DEIIFPQISS FLMLIKDGDR HVRRAAVSAL STFAHYKPNL IKGLLPELLP LLYDQTVIKK ELIRTVDLGP FKHVVDDGLE LRKAAFECVF TLVDSCLDQV
1101: NPSSFIVPFL KSGLEDHYDL KMLCHLILSL LADKCPSAVL AVLDSLVEPL HKTISFKPKQ DAVKQEHDRN EDMIRSALRA ISSLDRINGV DYSHKFKGLM
1201: GDMKRSVPLW EKFQTIRNE
0101: QHRDTASIAL RTVVAQIAPT LAPSILVTLT PQMIGGISGQ GMSSGIKCEC LEIMCDVVQK YGSLMTDDHE KLLNTLLLQL GCNQATVRKK TVTCIASLAS
0201: SLSDDLLAKA TVEVVKNLSN RNAKSEITRT NIQMIGALCR AVGYRFGTHL GNTVPVLINY CTSASENDEE LREYSLQALE SFLLRCPRDI SPYCDEILNL
0301: TLEYISYDPN FTDNMEEDTD NETLEDEEDD ESANEYTDDE DASWKVRRAA AKCLAGLIVS RSEMLTKVYQ EACPKLIDRF KEREENVKMD VFNTFIDLLR
0401: QTGNVTKGQT DTDESSPKWL LKQEVSKIVK SINRQLREKS VKTKVGAFSV LRELVVVLPD CLADHIGSLV PGIERALNDK SSTSNLKIEA LVFTKLVLAS
0501: HAPPVFHPYI KALSSPVLAA VGERYYKVTA EALRVCGELV RVVRPSTAGM GFDFKPFVHP IYNAIMSRLT NQDQDQEVKE CAITCMGLVI STFGDQLRAE
0601: LPSCLPVLVD RMGNEITRLT AVKAFSVIAT SPLHINLSCV LDHLIAELTG FLRKANRVLR QATLITMNTL VTAYGDKIGS EAYEVILVEL SSLISVSDLH
0701: MTALALELCC TLMTGKSCSE NISLAVRNKV LPQALTLVKS PLLQGQALLD LQKFFEALVY HANTSFYTLL ESLLSCAKPS PQSGGVPKQA LYSIAQCVAV
0801: LCLAAGDKNC SSTVKMLMEI LKDDSGTNSA KQHLALLSLG EIGRRKDLSA HAGIETIVIE SFQSPFEEIK SAASYALGNI AVGNLSNYLP FILDQIDNQQ
0901: KKQYILLHSL KEVIVRQSVD KADFQNSSVE KILALLFNHC ESEEEGVRNV VAECLGKMAL IEPEKLVPAL QVRTTSPAAF TRATVVTAVK YSVVERPEKL
1001: DEIIFPQISS FLMLIKDGDR HVRRAAVSAL STFAHYKPNL IKGLLPELLP LLYDQTVIKK ELIRTVDLGP FKHVVDDGLE LRKAAFECVF TLVDSCLDQV
1101: NPSSFIVPFL KSGLEDHYDL KMLCHLILSL LADKCPSAVL AVLDSLVEPL HKTISFKPKQ DAVKQEHDRN EDMIRSALRA ISSLDRINGV DYSHKFKGLM
1201: GDMKRSVPLW EKFQTIRNE
Arabidopsis Description
CAND1Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5Y6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.