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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_12s0035g01840.t01 Wine grape cytosol 87.51 87.44
KRH01878 Soybean endoplasmic reticulum 85.29 85.22
KRH51281 Soybean endoplasmic reticulum 85.21 85.21
GSMUA_Achr10P... Banana cytosol 81.92 80.99
HORVU5Hr1G011280.4 Barley cytosol, endoplasmic reticulum, peroxisome 42.15 80.66
CDY09359 Canola cytosol 80.03 80.03
Bra026586.1-P Field mustard cytosol 79.95 79.95
Os02t0167700-01 Rice plasma membrane 79.54 79.47
AT2G02560.1 Thale cress cytosol 79.54 79.41
CDY41685 Canola cytosol 79.87 79.02
Bra024815.1-P Field mustard cytosol 79.38 78.99
EES06334 Sorghum cytosol 78.96 78.84
CDY45206 Canola cytosol 78.64 78.83
CDY03047 Canola cytosol 79.46 78.81
TraesCS5D01G057500.1 Wheat cytosol 78.39 78.26
TraesCS5A01G046900.1 Wheat golgi 78.39 78.26
TraesCS5B01G051900.1 Wheat cytosol 78.23 78.1
HORVU2Hr1G005650.6 Barley cytosol 77.73 77.6
TraesCS2D01G036800.1 Wheat cytosol 77.65 77.52
TraesCS2A01G037800.2 Wheat cytosol, unclear 77.57 77.44
KRH75237 Soybean cytosol, endoplasmic reticulum, golgi, plastid 20.54 76.92
TraesCS2B01G051000.1 Wheat cytosol, golgi 76.99 76.87
HORVU0Hr1G010280.1 Barley plastid 6.57 75.47
HORVU1Hr1G041480.1 Barley cytosol 5.26 71.91
HORVU7Hr1G036210.1 Barley endoplasmic reticulum, plastid 4.11 71.43
Os02t0169800-01 Rice cytosol, plasma membrane 17.91 69.43
TraesCS5D01G419100.1 Wheat nucleus 59.82 68.61
Zm00001d049167_P001 Maize plastid 14.63 64.26
HORVU1Hr1G041490.1 Barley cytosol 2.96 63.16
HORVU5Hr1G059250.1 Barley cytosol 3.53 61.43
TraesCS5A01G409300.1 Wheat cytosol 49.96 48.68
Zm00001d050298_P001 Maize cytosol 16.02 40.21
Zm00001d027974_P002 Maize plastid 16.19 35.37
Zm00001d046662_P001 Maize cytosol 5.34 16.54
Protein Annotations
MapMan:19.2.2.8.1.5InterPro:ARM-type_foldGO:GO:0000003GO:GO:0003674GO:GO:0005488GO:GO:0005575
GO:GO:0005618GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829
GO:GO:0005886GO:GO:0006464GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009719
GO:GO:0009733GO:GO:0009791GO:GO:0009987GO:GO:0010051GO:GO:0010228GO:GO:0010265
GO:GO:0016020GO:GO:0016043GO:GO:0016567GO:GO:0019538GO:GO:0030312UniProt:K4B1M7
PFAM:PF08623PANTHER:PTHR12696PANTHER:PTHR12696:SF0SUPFAM:SSF48371EnsemblPlantsGene:Solyc01g103010.2EnsemblPlants:Solyc01g103010.2.1
InterPro:TATA-bd_TIP120UniParc:UPI000276803BSEG:seg:::
Description
No Description!
Coordinates
chr1:+:91672900..91687069
Molecular Weight (calculated)
134676.0 Da
IEP (calculated)
5.911
GRAVY (calculated)
-0.023
Length
1217 amino acids
Sequence
(BLAST)
0001: MANLTITNIL EKMTGKDKDY RYMATSDLLN ELNKEGFKLD AELEGKLSST VLQQLDDAAG DVSGLAVKCL APLAKKVREQ QVLEMTNRLC DKLLNGKEQH
0101: RDIASIALKT IVSEVPSSSI ARNVLVSISP KLIKGITAPG MSTEIKCECL DILCDVLHKY GNLMDTDHES LLTSLLPQLS SNQASVRKKT VSCIASLSSS
0201: LSDDLLAKAT VEVVRLLSNK SLKSEMIRTN IQMIGALSRA VGYRFGPHLG DTVPLLINYC TSASENDEEL REYSLQALES FLLRCPRDIY SYCDEILHLT
0301: LEYLSYDPNF TDNMDEDIDE EILEEDEDDE SANEYTDDED VSWKVRRAAA KCLAALVVTR PEMLSKLYEQ ACPKLIDRFK EREENVKMDV FSTFTELLRQ
0401: TGNVTKGQTD LNESSPRWLL KQEVPKIVRS LNKQLREKSV KTKVGAFSVL KELVVVLPDC LADHIGSLIP GIEKALCEKS STSNLKIEAL IFTRLVLASH
0501: SPPVFHPHIK AITSPVILAV GERYYKVTAD ALRVCGELVR VLRPKIEGST FDFKPYVLPI YNAIMVRLTN QDQDQEVKES AITCMGLVVS TFGDHLHAEL
0601: PACLPVLVDR MGNEITRLTA VKAFAVIAAS PLHLDLSCVI EQVISELTAF LRKANRALRQ ATLGTLNTLI VAYGDKIGSA AYEVIVMELS TLISDSDLHM
0701: TALALELCCT LMADRRSSAN VGLTVRSKVL PQALTLVRSS LLQGQALLAL QNFFAALVYS ANTSFDTLLD SLLSTAKPSP QSGGVTKQAL FSIGQCVAVL
0801: CLAAGDRKCS STVNMLTDSL KDDSSTNSAK QHLALLCLGE IGRRKDLSPH AHIENIVIES FQSPFEEIKS AASYALGNIA VGNLPKYLPF ILDKIDNQQK
0901: KQYLLLHSLK EVIVRQSVDN AEFQDSSVDK ILNLLFNHCE SDEEGVRNVV AECLGKIALI EPGKLVPALK DRISNPAAFT RATVVIAVKY SIVERPEKID
1001: EILSREISSF LVLIKDKDRH VRRAAVLALS TAAHNKPNLI KGLLLELLPL LYDQTIIKKE LIRTVDLGPF KHTVDDGLEL RKAAFECVDT LLDTCLDQVN
1101: PSSFIVPYLQ SGLDDHYDVK MPCHLILSKL ADKCPSAVLA VLDSLVDPLQ KTINFRPKQD AVKQEVDRNE DMIRSALRAI AALNRISGGD YSHKLKNLMV
1201: EIEKTSLWDK YCCIRNE
Best Arabidopsis Sequence Match ( AT2G02560.2 )
(BLAST)
0001: MANLQVSGIL EKMTGKDKDY RYMATSDLLN ELNKDSFKID LDLEVRLSSI ILQQLDDVAG DVSGLAVKCL APLVKKVGEE RIVEMTNKLC DKLLHGKDQH
0101: RDTASIALRT VVAQIAPTLA PSILVTLTPQ MIGGISGQGM SSGIKCECLE IMCDVVQKYG SLMTDDHEKL LNTLLLQLGC NQATVRKKTV TCIASLASSL
0201: SDDLLAKATV EVVKNLSNRN AKSEITRTNI QMIGALCRAV GYRFGTHLGN TVPVLINYCT SASENDEELR EYSLQALESF LLRCPRDISP YCDEILNLTL
0301: EYISYDPNFT DNMEEDTDNE TLEDEEDDES ANEYTDDEDA SWKVRRAAAK CLAGLIVSRS EMLTKVYQEA CPKLIDRFKE REENVKMDVF NTFIDLLRQT
0401: GNVTKGQTDT DESSPKWLLK QEVSKIVKSI NRQLREKSVK TKVGAFSVLR ELVVVLPDCL ADHIGSLVPG IERALNDKSS TSNLKIEALV FTKLVLASHA
0501: PPVFHPYIKA LSSPVLAAVG ERYYKVTAEA LRVCGELVRV VRPSTAGMGF DFKPFVHPIY NAIMSRLTNQ DQDQEVKECA ITCMGLVIST FGDQLRAELP
0601: SCLPVLVDRM GNEITRLTAV KAFSVIATSP LHINLSCVLD HLIAELTGFL RKANRVLRQA TLITMNTLVT AYGDKIGSEA YEVILVELSS LISVSDLHMT
0701: ALALELCCTL MTGKSCSENI SLAVRNKVLP QALTLVKSPL LQGQALLDLQ KFFEALVYHA NTSFYTLLES LLSCAKPSPQ SGGVPKQALY SIAQCVAVLC
0801: LAAGDKNCSS TVKMLMEILK DDSGTNSAKQ HLALLSLGEI GRRKDLSAHA GIETIVIESF QSPFEEIKSA ASYALGNIAV GNLSNYLPFI LDQIDNQQKK
0901: QYILLHSLKE VIVRQSVDKA DFQNSSVEKI LALLFNHCES EEEGVRNVVA ECLGKMALIE PEKLVPALQV RTTSPAAFTR ATVVTAVKYS VVERPEKLDE
1001: IIFPQISSFL MLIKDGDRHV RRAAVSALST FAHYKPNLIK GLLPELLPLL YDQTVIKKEL IRTVDLGPFK HVVDDGLELR KAAFECVFTL VDSCLDQVNP
1101: SSFIVPFLKS GLEDHYDLKM LCHLILSLLA DKCPSAVLAV LDSLVEPLHK TISFKPKQDA VKQEHDRNED MIRSALRAIS SLDRINGVDY SHKFKGLMGD
1201: MKRSVPLWEK FQTIRNE
Arabidopsis Description
CAND1Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5Y6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.