Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_12s0035g01840.t01 | Wine grape | cytosol | 87.51 | 87.44 |
KRH01878 | Soybean | endoplasmic reticulum | 85.29 | 85.22 |
KRH51281 | Soybean | endoplasmic reticulum | 85.21 | 85.21 |
GSMUA_Achr10P... | Banana | cytosol | 81.92 | 80.99 |
HORVU5Hr1G011280.4 | Barley | cytosol, endoplasmic reticulum, peroxisome | 42.15 | 80.66 |
CDY09359 | Canola | cytosol | 80.03 | 80.03 |
Bra026586.1-P | Field mustard | cytosol | 79.95 | 79.95 |
Os02t0167700-01 | Rice | plasma membrane | 79.54 | 79.47 |
AT2G02560.1 | Thale cress | cytosol | 79.54 | 79.41 |
CDY41685 | Canola | cytosol | 79.87 | 79.02 |
Bra024815.1-P | Field mustard | cytosol | 79.38 | 78.99 |
EES06334 | Sorghum | cytosol | 78.96 | 78.84 |
CDY45206 | Canola | cytosol | 78.64 | 78.83 |
CDY03047 | Canola | cytosol | 79.46 | 78.81 |
TraesCS5D01G057500.1 | Wheat | cytosol | 78.39 | 78.26 |
TraesCS5A01G046900.1 | Wheat | golgi | 78.39 | 78.26 |
TraesCS5B01G051900.1 | Wheat | cytosol | 78.23 | 78.1 |
HORVU2Hr1G005650.6 | Barley | cytosol | 77.73 | 77.6 |
TraesCS2D01G036800.1 | Wheat | cytosol | 77.65 | 77.52 |
TraesCS2A01G037800.2 | Wheat | cytosol, unclear | 77.57 | 77.44 |
KRH75237 | Soybean | cytosol, endoplasmic reticulum, golgi, plastid | 20.54 | 76.92 |
TraesCS2B01G051000.1 | Wheat | cytosol, golgi | 76.99 | 76.87 |
HORVU0Hr1G010280.1 | Barley | plastid | 6.57 | 75.47 |
HORVU1Hr1G041480.1 | Barley | cytosol | 5.26 | 71.91 |
HORVU7Hr1G036210.1 | Barley | endoplasmic reticulum, plastid | 4.11 | 71.43 |
Os02t0169800-01 | Rice | cytosol, plasma membrane | 17.91 | 69.43 |
TraesCS5D01G419100.1 | Wheat | nucleus | 59.82 | 68.61 |
Zm00001d049167_P001 | Maize | plastid | 14.63 | 64.26 |
HORVU1Hr1G041490.1 | Barley | cytosol | 2.96 | 63.16 |
HORVU5Hr1G059250.1 | Barley | cytosol | 3.53 | 61.43 |
TraesCS5A01G409300.1 | Wheat | cytosol | 49.96 | 48.68 |
Zm00001d050298_P001 | Maize | cytosol | 16.02 | 40.21 |
Zm00001d027974_P002 | Maize | plastid | 16.19 | 35.37 |
Zm00001d046662_P001 | Maize | cytosol | 5.34 | 16.54 |
Protein Annotations
MapMan:19.2.2.8.1.5 | InterPro:ARM-type_fold | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
GO:GO:0005886 | GO:GO:0006464 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009719 |
GO:GO:0009733 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010051 | GO:GO:0010228 | GO:GO:0010265 |
GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016567 | GO:GO:0019538 | GO:GO:0030312 | UniProt:K4B1M7 |
PFAM:PF08623 | PANTHER:PTHR12696 | PANTHER:PTHR12696:SF0 | SUPFAM:SSF48371 | EnsemblPlantsGene:Solyc01g103010.2 | EnsemblPlants:Solyc01g103010.2.1 |
InterPro:TATA-bd_TIP120 | UniParc:UPI000276803B | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1:+:91672900..91687069
Molecular Weight (calculated)
134676.0 Da
IEP (calculated)
5.911
GRAVY (calculated)
-0.023
Length
1217 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANLTITNIL EKMTGKDKDY RYMATSDLLN ELNKEGFKLD AELEGKLSST VLQQLDDAAG DVSGLAVKCL APLAKKVREQ QVLEMTNRLC DKLLNGKEQH
0101: RDIASIALKT IVSEVPSSSI ARNVLVSISP KLIKGITAPG MSTEIKCECL DILCDVLHKY GNLMDTDHES LLTSLLPQLS SNQASVRKKT VSCIASLSSS
0201: LSDDLLAKAT VEVVRLLSNK SLKSEMIRTN IQMIGALSRA VGYRFGPHLG DTVPLLINYC TSASENDEEL REYSLQALES FLLRCPRDIY SYCDEILHLT
0301: LEYLSYDPNF TDNMDEDIDE EILEEDEDDE SANEYTDDED VSWKVRRAAA KCLAALVVTR PEMLSKLYEQ ACPKLIDRFK EREENVKMDV FSTFTELLRQ
0401: TGNVTKGQTD LNESSPRWLL KQEVPKIVRS LNKQLREKSV KTKVGAFSVL KELVVVLPDC LADHIGSLIP GIEKALCEKS STSNLKIEAL IFTRLVLASH
0501: SPPVFHPHIK AITSPVILAV GERYYKVTAD ALRVCGELVR VLRPKIEGST FDFKPYVLPI YNAIMVRLTN QDQDQEVKES AITCMGLVVS TFGDHLHAEL
0601: PACLPVLVDR MGNEITRLTA VKAFAVIAAS PLHLDLSCVI EQVISELTAF LRKANRALRQ ATLGTLNTLI VAYGDKIGSA AYEVIVMELS TLISDSDLHM
0701: TALALELCCT LMADRRSSAN VGLTVRSKVL PQALTLVRSS LLQGQALLAL QNFFAALVYS ANTSFDTLLD SLLSTAKPSP QSGGVTKQAL FSIGQCVAVL
0801: CLAAGDRKCS STVNMLTDSL KDDSSTNSAK QHLALLCLGE IGRRKDLSPH AHIENIVIES FQSPFEEIKS AASYALGNIA VGNLPKYLPF ILDKIDNQQK
0901: KQYLLLHSLK EVIVRQSVDN AEFQDSSVDK ILNLLFNHCE SDEEGVRNVV AECLGKIALI EPGKLVPALK DRISNPAAFT RATVVIAVKY SIVERPEKID
1001: EILSREISSF LVLIKDKDRH VRRAAVLALS TAAHNKPNLI KGLLLELLPL LYDQTIIKKE LIRTVDLGPF KHTVDDGLEL RKAAFECVDT LLDTCLDQVN
1101: PSSFIVPYLQ SGLDDHYDVK MPCHLILSKL ADKCPSAVLA VLDSLVDPLQ KTINFRPKQD AVKQEVDRNE DMIRSALRAI AALNRISGGD YSHKLKNLMV
1201: EIEKTSLWDK YCCIRNE
0101: RDIASIALKT IVSEVPSSSI ARNVLVSISP KLIKGITAPG MSTEIKCECL DILCDVLHKY GNLMDTDHES LLTSLLPQLS SNQASVRKKT VSCIASLSSS
0201: LSDDLLAKAT VEVVRLLSNK SLKSEMIRTN IQMIGALSRA VGYRFGPHLG DTVPLLINYC TSASENDEEL REYSLQALES FLLRCPRDIY SYCDEILHLT
0301: LEYLSYDPNF TDNMDEDIDE EILEEDEDDE SANEYTDDED VSWKVRRAAA KCLAALVVTR PEMLSKLYEQ ACPKLIDRFK EREENVKMDV FSTFTELLRQ
0401: TGNVTKGQTD LNESSPRWLL KQEVPKIVRS LNKQLREKSV KTKVGAFSVL KELVVVLPDC LADHIGSLIP GIEKALCEKS STSNLKIEAL IFTRLVLASH
0501: SPPVFHPHIK AITSPVILAV GERYYKVTAD ALRVCGELVR VLRPKIEGST FDFKPYVLPI YNAIMVRLTN QDQDQEVKES AITCMGLVVS TFGDHLHAEL
0601: PACLPVLVDR MGNEITRLTA VKAFAVIAAS PLHLDLSCVI EQVISELTAF LRKANRALRQ ATLGTLNTLI VAYGDKIGSA AYEVIVMELS TLISDSDLHM
0701: TALALELCCT LMADRRSSAN VGLTVRSKVL PQALTLVRSS LLQGQALLAL QNFFAALVYS ANTSFDTLLD SLLSTAKPSP QSGGVTKQAL FSIGQCVAVL
0801: CLAAGDRKCS STVNMLTDSL KDDSSTNSAK QHLALLCLGE IGRRKDLSPH AHIENIVIES FQSPFEEIKS AASYALGNIA VGNLPKYLPF ILDKIDNQQK
0901: KQYLLLHSLK EVIVRQSVDN AEFQDSSVDK ILNLLFNHCE SDEEGVRNVV AECLGKIALI EPGKLVPALK DRISNPAAFT RATVVIAVKY SIVERPEKID
1001: EILSREISSF LVLIKDKDRH VRRAAVLALS TAAHNKPNLI KGLLLELLPL LYDQTIIKKE LIRTVDLGPF KHTVDDGLEL RKAAFECVDT LLDTCLDQVN
1101: PSSFIVPYLQ SGLDDHYDVK MPCHLILSKL ADKCPSAVLA VLDSLVDPLQ KTINFRPKQD AVKQEVDRNE DMIRSALRAI AALNRISGGD YSHKLKNLMV
1201: EIEKTSLWDK YCCIRNE
0001: MANLQVSGIL EKMTGKDKDY RYMATSDLLN ELNKDSFKID LDLEVRLSSI ILQQLDDVAG DVSGLAVKCL APLVKKVGEE RIVEMTNKLC DKLLHGKDQH
0101: RDTASIALRT VVAQIAPTLA PSILVTLTPQ MIGGISGQGM SSGIKCECLE IMCDVVQKYG SLMTDDHEKL LNTLLLQLGC NQATVRKKTV TCIASLASSL
0201: SDDLLAKATV EVVKNLSNRN AKSEITRTNI QMIGALCRAV GYRFGTHLGN TVPVLINYCT SASENDEELR EYSLQALESF LLRCPRDISP YCDEILNLTL
0301: EYISYDPNFT DNMEEDTDNE TLEDEEDDES ANEYTDDEDA SWKVRRAAAK CLAGLIVSRS EMLTKVYQEA CPKLIDRFKE REENVKMDVF NTFIDLLRQT
0401: GNVTKGQTDT DESSPKWLLK QEVSKIVKSI NRQLREKSVK TKVGAFSVLR ELVVVLPDCL ADHIGSLVPG IERALNDKSS TSNLKIEALV FTKLVLASHA
0501: PPVFHPYIKA LSSPVLAAVG ERYYKVTAEA LRVCGELVRV VRPSTAGMGF DFKPFVHPIY NAIMSRLTNQ DQDQEVKECA ITCMGLVIST FGDQLRAELP
0601: SCLPVLVDRM GNEITRLTAV KAFSVIATSP LHINLSCVLD HLIAELTGFL RKANRVLRQA TLITMNTLVT AYGDKIGSEA YEVILVELSS LISVSDLHMT
0701: ALALELCCTL MTGKSCSENI SLAVRNKVLP QALTLVKSPL LQGQALLDLQ KFFEALVYHA NTSFYTLLES LLSCAKPSPQ SGGVPKQALY SIAQCVAVLC
0801: LAAGDKNCSS TVKMLMEILK DDSGTNSAKQ HLALLSLGEI GRRKDLSAHA GIETIVIESF QSPFEEIKSA ASYALGNIAV GNLSNYLPFI LDQIDNQQKK
0901: QYILLHSLKE VIVRQSVDKA DFQNSSVEKI LALLFNHCES EEEGVRNVVA ECLGKMALIE PEKLVPALQV RTTSPAAFTR ATVVTAVKYS VVERPEKLDE
1001: IIFPQISSFL MLIKDGDRHV RRAAVSALST FAHYKPNLIK GLLPELLPLL YDQTVIKKEL IRTVDLGPFK HVVDDGLELR KAAFECVFTL VDSCLDQVNP
1101: SSFIVPFLKS GLEDHYDLKM LCHLILSLLA DKCPSAVLAV LDSLVEPLHK TISFKPKQDA VKQEHDRNED MIRSALRAIS SLDRINGVDY SHKFKGLMGD
1201: MKRSVPLWEK FQTIRNE
0101: RDTASIALRT VVAQIAPTLA PSILVTLTPQ MIGGISGQGM SSGIKCECLE IMCDVVQKYG SLMTDDHEKL LNTLLLQLGC NQATVRKKTV TCIASLASSL
0201: SDDLLAKATV EVVKNLSNRN AKSEITRTNI QMIGALCRAV GYRFGTHLGN TVPVLINYCT SASENDEELR EYSLQALESF LLRCPRDISP YCDEILNLTL
0301: EYISYDPNFT DNMEEDTDNE TLEDEEDDES ANEYTDDEDA SWKVRRAAAK CLAGLIVSRS EMLTKVYQEA CPKLIDRFKE REENVKMDVF NTFIDLLRQT
0401: GNVTKGQTDT DESSPKWLLK QEVSKIVKSI NRQLREKSVK TKVGAFSVLR ELVVVLPDCL ADHIGSLVPG IERALNDKSS TSNLKIEALV FTKLVLASHA
0501: PPVFHPYIKA LSSPVLAAVG ERYYKVTAEA LRVCGELVRV VRPSTAGMGF DFKPFVHPIY NAIMSRLTNQ DQDQEVKECA ITCMGLVIST FGDQLRAELP
0601: SCLPVLVDRM GNEITRLTAV KAFSVIATSP LHINLSCVLD HLIAELTGFL RKANRVLRQA TLITMNTLVT AYGDKIGSEA YEVILVELSS LISVSDLHMT
0701: ALALELCCTL MTGKSCSENI SLAVRNKVLP QALTLVKSPL LQGQALLDLQ KFFEALVYHA NTSFYTLLES LLSCAKPSPQ SGGVPKQALY SIAQCVAVLC
0801: LAAGDKNCSS TVKMLMEILK DDSGTNSAKQ HLALLSLGEI GRRKDLSAHA GIETIVIESF QSPFEEIKSA ASYALGNIAV GNLSNYLPFI LDQIDNQQKK
0901: QYILLHSLKE VIVRQSVDKA DFQNSSVEKI LALLFNHCES EEEGVRNVVA ECLGKMALIE PEKLVPALQV RTTSPAAFTR ATVVTAVKYS VVERPEKLDE
1001: IIFPQISSFL MLIKDGDRHV RRAAVSALST FAHYKPNLIK GLLPELLPLL YDQTVIKKEL IRTVDLGPFK HVVDDGLELR KAAFECVFTL VDSCLDQVNP
1101: SSFIVPFLKS GLEDHYDLKM LCHLILSLLA DKCPSAVLAV LDSLVEPLHK TISFKPKQDA VKQEHDRNED MIRSALRAIS SLDRINGVDY SHKFKGLMGD
1201: MKRSVPLWEK FQTIRNE
Arabidopsis Description
CAND1Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5Y6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.