Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
18260611
plasma membrane: 27800704 plastid: 27992503 plasma membrane: 28056797 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G011280.4 | Barley | cytosol, endoplasmic reticulum, peroxisome | 48.77 | 93.4 |
| EES06334 | Sorghum | cytosol | 93.1 | 93.03 |
| TraesCS5D01G057500.1 | Wheat | cytosol | 92.86 | 92.78 |
| Os02t0169800-01 | Rice | cytosol, plasma membrane | 23.89 | 92.68 |
| TraesCS5A01G046900.1 | Wheat | golgi | 92.69 | 92.62 |
| TraesCS5B01G051900.1 | Wheat | cytosol | 92.53 | 92.45 |
| HORVU2Hr1G005650.6 | Barley | cytosol | 91.3 | 91.22 |
| TraesCS2D01G036800.1 | Wheat | cytosol | 91.05 | 90.98 |
| TraesCS2A01G037800.2 | Wheat | cytosol, unclear | 91.05 | 90.98 |
| TraesCS2B01G051000.1 | Wheat | cytosol, golgi | 90.64 | 90.57 |
| Zm00001d053813_P002 | Maize | mitochondrion | 92.53 | 88.74 |
| HORVU0Hr1G010280.1 | Barley | plastid | 7.55 | 86.79 |
| HORVU1Hr1G041480.1 | Barley | cytosol | 6.24 | 85.39 |
| GSMUA_Achr10P... | Banana | cytosol | 85.47 | 84.57 |
| HORVU7Hr1G036210.1 | Barley | endoplasmic reticulum, plastid | 4.84 | 84.29 |
| HORVU5Hr1G059250.1 | Barley | cytosol | 4.84 | 84.29 |
| HORVU1Hr1G041490.1 | Barley | cytosol | 3.86 | 82.46 |
| VIT_12s0035g01840.t01 | Wine grape | cytosol | 82.02 | 82.02 |
| KRH51281 | Soybean | endoplasmic reticulum | 81.2 | 81.27 |
| KRH01878 | Soybean | endoplasmic reticulum | 80.95 | 80.95 |
| TraesCS5D01G419100.1 | Wheat | nucleus | 70.44 | 80.87 |
| Solyc01g103010.2.1 | Tomato | cytosol | 79.47 | 79.54 |
| CDY09359 | Canola | cytosol | 76.35 | 76.42 |
| Bra026586.1-P | Field mustard | cytosol | 76.35 | 76.42 |
| AT2G02560.1 | Thale cress | cytosol | 76.11 | 76.05 |
| CDY41685 | Canola | cytosol | 76.27 | 75.53 |
| CDY45206 | Canola | cytosol | 75.21 | 75.45 |
| Bra024815.1-P | Field mustard | cytosol | 75.45 | 75.14 |
| CDY03047 | Canola | cytosol | 75.62 | 75.06 |
| KRH75237 | Soybean | cytosol, endoplasmic reticulum, golgi, plastid | 19.38 | 72.62 |
| TraesCS5A01G409300.1 | Wheat | cytosol | 59.69 | 58.21 |
Protein Annotations
| MapMan:19.2.2.8.1.5 | EntrezGene:4328423 | EMBL:AK069128 | InterPro:ARM-type_fold | ProteinID:BAD26245.1 | ProteinID:BAF07922.1 |
| ProteinID:BAS77166.1 | ProteinID:EEE56383.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010265 | GO:GO:0016043 | GO:GO:0016567 | GO:GO:0019538 | EnsemblPlantsGene:Os02g0167700 | EnsemblPlants:Os02t0167700-01 |
| PFAM:PF08623 | PANTHER:PTHR12696 | PANTHER:PTHR12696:SF0 | UniProt:Q6H4V4 | SUPFAM:SSF48371 | InterPro:TATA-bd_TIP120 |
| UniParc:UPI00003B4667 | RefSeq:XP_015626379.1 | RefSeq:XP_015626380.1 | SEG:seg | : | : |
Description
Armadillo-like helical domain containing protein. (Os02t0167700-01)
Coordinates
chr2:-:3659299..3669323
Molecular Weight (calculated)
134281.0 Da
IEP (calculated)
5.976
GRAVY (calculated)
-0.033
Length
1218 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANMNITTIL EKMTGKDKDY RYMATSDLLS ELNKEGFKAD QDIEPKLTTT VLQQLEDASG DVSGLAVKCL APLVKKVGED RVVEMTNILC DKLLNGKDQH
0101: RDTASIALKT IIVEVTTTSL AEKILVSLAP QLIKGATAGK SAEVKCECLD ILGDVLHRFG NLITKDHDSM LTALLSQLSS NQASVRKKSI SCIASLAACL
0201: SDDLLAKATF EVVQLLKNRS AKSEIARTNI QMIGALSRSV GYRFGPHLAE AVPLLINYCT SASENDEELR EYSLQALESF MLRCPRDISP YCEGILNLAL
0301: EYISYDPNFT DSMEEDTDDE AQDEEDDDES ANEYTDDEDA SWKVRRASAK CLSAIIVSRP EMLSKMYLEA CPKLIERFRE REENVKMDIF NTFIELLRQT
0401: GNMTKGQGDI DESSPRWLLK QEVPKVVKSI NRQLREKSIK TKVGAFSVLK ELVVVLPDCL ADHIGSLVPG IEKALNDKSS TSNLKIEALV FTRLVMASHS
0501: PAVFHPYIQA LSGPILSAIG DRYYKVTAEA LRVCGELVRV LRPNFEARTL DYRPYIGPIY KAILARLANQ DQDQEVKECA ISCMSLVVFT FGDGLQRELP
0601: ACLPILVDRM GNEITRLTAV KAFAVIAKSP LRIDLSCVLD HVISELTAFL RKANRALRQA TLGTLNSLVV AYGGQIGSSY ETIIAELSTL ISDMDLHMTA
0701: LALELCCTIM VDRKSIQNVG LAVRYKVLPQ ALILIRSALL QGQALQALQR FFASLVQSAN TSFDTLLDSL ISTAKPSQSG GLAKQALSSI AQCVAVLCLA
0801: AGDQKCASTI EMLKGILKDD STTNSAKQHM ALLCLGEIGR RKDLSNHAQI ENIVIESFQS PFEEIKSAAS YALGNIAVGN LSKYLPFILN QIDNQQKKQY
0901: LLLHSLKEVI ARQSVDHTGQ SELQDSNIEK ILALLFNHCE SEEEGVRNVV AECLGKIALI EPRKLIPALK ERTSSPAANT RATVAIAIKY SIVERPGKID
1001: EIMYSEISTF LMLIKDSDRH VRRAAVLALS TAAHNKPNLI KGLLPELLPL LYDQTVVKQE LIRTVDLGPF KHVVDDGLEL RKAAFECVDT LLDSCLDQVN
1101: PSSFIVPFLL SGLGDHYDVK MPCHLILSKL ADKCPSAVLA VLDSLVDPIE KTINHKPKGD AVKQEVDRNE DMIRSALRAI AALSRISGND YSMRFKNLMN
1201: KIMASPPLAD KYNSVRSE
0101: RDTASIALKT IIVEVTTTSL AEKILVSLAP QLIKGATAGK SAEVKCECLD ILGDVLHRFG NLITKDHDSM LTALLSQLSS NQASVRKKSI SCIASLAACL
0201: SDDLLAKATF EVVQLLKNRS AKSEIARTNI QMIGALSRSV GYRFGPHLAE AVPLLINYCT SASENDEELR EYSLQALESF MLRCPRDISP YCEGILNLAL
0301: EYISYDPNFT DSMEEDTDDE AQDEEDDDES ANEYTDDEDA SWKVRRASAK CLSAIIVSRP EMLSKMYLEA CPKLIERFRE REENVKMDIF NTFIELLRQT
0401: GNMTKGQGDI DESSPRWLLK QEVPKVVKSI NRQLREKSIK TKVGAFSVLK ELVVVLPDCL ADHIGSLVPG IEKALNDKSS TSNLKIEALV FTRLVMASHS
0501: PAVFHPYIQA LSGPILSAIG DRYYKVTAEA LRVCGELVRV LRPNFEARTL DYRPYIGPIY KAILARLANQ DQDQEVKECA ISCMSLVVFT FGDGLQRELP
0601: ACLPILVDRM GNEITRLTAV KAFAVIAKSP LRIDLSCVLD HVISELTAFL RKANRALRQA TLGTLNSLVV AYGGQIGSSY ETIIAELSTL ISDMDLHMTA
0701: LALELCCTIM VDRKSIQNVG LAVRYKVLPQ ALILIRSALL QGQALQALQR FFASLVQSAN TSFDTLLDSL ISTAKPSQSG GLAKQALSSI AQCVAVLCLA
0801: AGDQKCASTI EMLKGILKDD STTNSAKQHM ALLCLGEIGR RKDLSNHAQI ENIVIESFQS PFEEIKSAAS YALGNIAVGN LSKYLPFILN QIDNQQKKQY
0901: LLLHSLKEVI ARQSVDHTGQ SELQDSNIEK ILALLFNHCE SEEEGVRNVV AECLGKIALI EPRKLIPALK ERTSSPAANT RATVAIAIKY SIVERPGKID
1001: EIMYSEISTF LMLIKDSDRH VRRAAVLALS TAAHNKPNLI KGLLPELLPL LYDQTVVKQE LIRTVDLGPF KHVVDDGLEL RKAAFECVDT LLDSCLDQVN
1101: PSSFIVPFLL SGLGDHYDVK MPCHLILSKL ADKCPSAVLA VLDSLVDPIE KTINHKPKGD AVKQEVDRNE DMIRSALRAI AALSRISGND YSMRFKNLMN
1201: KIMASPPLAD KYNSVRSE
0001: MANLQVSGIL EKMTGKDKDY RYMATSDLLN ELNKDSFKID LDLEVRLSSI ILQQLDDVAG DVSGLAVKCL APLVKKVGEE RIVEMTNKLC DKLLHGKDQH
0101: RDTASIALRT VVAQIAPTLA PSILVTLTPQ MIGGISGQGM SSGIKCECLE IMCDVVQKYG SLMTDDHEKL LNTLLLQLGC NQATVRKKTV TCIASLASSL
0201: SDDLLAKATV EVVKNLSNRN AKSEITRTNI QMIGALCRAV GYRFGTHLGN TVPVLINYCT SASENDEELR EYSLQALESF LLRCPRDISP YCDEILNLTL
0301: EYISYDPNFT DNMEEDTDNE TLEDEEDDES ANEYTDDEDA SWKVRRAAAK CLAGLIVSRS EMLTKVYQEA CPKLIDRFKE REENVKMDVF NTFIDLLRQT
0401: GNVTKGQTDT DESSPKWLLK QEVSKIVKSI NRQLREKSVK TKVGAFSVLR ELVVVLPDCL ADHIGSLVPG IERALNDKSS TSNLKIEALV FTKLVLASHA
0501: PPVFHPYIKA LSSPVLAAVG ERYYKVTAEA LRVCGELVRV VRPSTAGMGF DFKPFVHPIY NAIMSRLTNQ DQDQEVKECA ITCMGLVIST FGDQLRAELP
0601: SCLPVLVDRM GNEITRLTAV KAFSVIATSP LHINLSCVLD HLIAELTGFL RKANRVLRQA TLITMNTLVT AYGDKIGSEA YEVILVELSS LISVSDLHMT
0701: ALALELCCTL MTGKSCSENI SLAVRNKVLP QALTLVKSPL LQGQALLDLQ KFFEALVYHA NTSFYTLLES LLSCAKPSPQ SGGVPKQALY SIAQCVAVLC
0801: LAAGDKNCSS TVKMLMEILK DDSGTNSAKQ HLALLSLGEI GRRKDLSAHA GIETIVIESF QSPFEEIKSA ASYALGNIAV GNLSNYLPFI LDQIDNQQKK
0901: QYILLHSLKE VIVRQSVDKA DFQNSSVEKI LALLFNHCES EEEGVRNVVA ECLGKMALIE PEKLVPALQV RTTSPAAFTR ATVVTAVKYS VVERPEKLDE
1001: IIFPQISSFL MLIKDGDRHV RRAAVSALST FAHYKPNLIK GLLPELLPLL YDQTVIKKEL IRTVDLGPFK HVVDDGLELR KAAFECVFTL VDSCLDQVNP
1101: SSFIVPFLKS GLEDHYDLKM LCHLILSLLA DKCPSAVLAV LDSLVEPLHK TISFKPKQDA VKQEHDRNED MIRSALRAIS SLDRINGVDY SHKFKGLMGD
1201: MKRSVPLWEK FQTIRNE
0101: RDTASIALRT VVAQIAPTLA PSILVTLTPQ MIGGISGQGM SSGIKCECLE IMCDVVQKYG SLMTDDHEKL LNTLLLQLGC NQATVRKKTV TCIASLASSL
0201: SDDLLAKATV EVVKNLSNRN AKSEITRTNI QMIGALCRAV GYRFGTHLGN TVPVLINYCT SASENDEELR EYSLQALESF LLRCPRDISP YCDEILNLTL
0301: EYISYDPNFT DNMEEDTDNE TLEDEEDDES ANEYTDDEDA SWKVRRAAAK CLAGLIVSRS EMLTKVYQEA CPKLIDRFKE REENVKMDVF NTFIDLLRQT
0401: GNVTKGQTDT DESSPKWLLK QEVSKIVKSI NRQLREKSVK TKVGAFSVLR ELVVVLPDCL ADHIGSLVPG IERALNDKSS TSNLKIEALV FTKLVLASHA
0501: PPVFHPYIKA LSSPVLAAVG ERYYKVTAEA LRVCGELVRV VRPSTAGMGF DFKPFVHPIY NAIMSRLTNQ DQDQEVKECA ITCMGLVIST FGDQLRAELP
0601: SCLPVLVDRM GNEITRLTAV KAFSVIATSP LHINLSCVLD HLIAELTGFL RKANRVLRQA TLITMNTLVT AYGDKIGSEA YEVILVELSS LISVSDLHMT
0701: ALALELCCTL MTGKSCSENI SLAVRNKVLP QALTLVKSPL LQGQALLDLQ KFFEALVYHA NTSFYTLLES LLSCAKPSPQ SGGVPKQALY SIAQCVAVLC
0801: LAAGDKNCSS TVKMLMEILK DDSGTNSAKQ HLALLSLGEI GRRKDLSAHA GIETIVIESF QSPFEEIKSA ASYALGNIAV GNLSNYLPFI LDQIDNQQKK
0901: QYILLHSLKE VIVRQSVDKA DFQNSSVEKI LALLFNHCES EEEGVRNVVA ECLGKMALIE PEKLVPALQV RTTSPAAFTR ATVVTAVKYS VVERPEKLDE
1001: IIFPQISSFL MLIKDGDRHV RRAAVSALST FAHYKPNLIK GLLPELLPLL YDQTVIKKEL IRTVDLGPFK HVVDDGLELR KAAFECVFTL VDSCLDQVNP
1101: SSFIVPFLKS GLEDHYDLKM LCHLILSLLA DKCPSAVLAV LDSLVEPLHK TISFKPKQDA VKQEHDRNED MIRSALRAIS SLDRINGVDY SHKFKGLMGD
1201: MKRSVPLWEK FQTIRNE
Arabidopsis Description
CAND1Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5Y6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.