Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0673000-00 | Rice | nucleus | 12.26 | 66.23 |
| Os03t0771500-01 | Rice | nucleus | 48.56 | 60.12 |
| CDY34012 | Canola | nucleus | 25.72 | 55.44 |
| TraesCS5B01G410600.1 | Wheat | nucleus | 35.1 | 46.2 |
| TraesCS5A01G405900.1 | Wheat | nucleus | 35.82 | 44.74 |
| TraesCS5D01G415900.1 | Wheat | nucleus | 35.82 | 43.95 |
| GSMUA_Achr10P... | Banana | nucleus | 26.92 | 43.08 |
| OQU90921 | Sorghum | nucleus | 35.34 | 42.12 |
| Os07t0129700-01 | Rice | nucleus | 34.38 | 40.28 |
| HORVU5Hr1G098570.6 | Barley | plastid | 35.34 | 36.21 |
| VIT_18s0001g08380.t01 | Wine grape | nucleus | 31.73 | 35.68 |
| Solyc04g077210.2.1 | Tomato | nucleus | 30.05 | 35.21 |
| PGSC0003DMT400012712 | Potato | nucleus | 30.05 | 34.72 |
| Os01t0302500-01 | Rice | nucleus | 24.76 | 34.22 |
| KRH61471 | Soybean | nucleus | 29.57 | 34.07 |
| KRH15482 | Soybean | nucleus | 31.01 | 33.51 |
| KRG88661 | Soybean | nucleus | 30.77 | 33.07 |
| Bra000638.1-P | Field mustard | nucleus | 30.29 | 32.56 |
| Os03t0727000-02 | Rice | nucleus | 28.12 | 32.41 |
| AT4G08150.1 | Thale cress | nucleus | 30.77 | 32.16 |
| Os05t0129700-01 | Rice | nucleus | 23.8 | 31.83 |
| CDX83145 | Canola | nucleus | 30.29 | 31.34 |
| Zm00001d034212_P001 | Maize | nucleus | 36.3 | 31.2 |
| Os03t0727200-00 | Rice | nucleus | 26.2 | 29.86 |
| Os08t0292900-01 | Rice | nucleus, plasma membrane | 15.14 | 29.86 |
| Os03t0673500-00 | Rice | nucleus | 23.08 | 27.91 |
| CDY68624 | Canola | nucleus | 20.91 | 24.93 |
| Os02t0182800-01 | Rice | nucleus | 17.55 | 23.32 |
| Os06t0646600-01 | Rice | nucleus | 17.07 | 21.98 |
| Os03t0123500-02 | Rice | nucleus | 16.59 | 21.97 |
Protein Annotations
| MapMan:15.5.3.4 | UniProt:A0A0P0W446 | ProteinID:BAS86600.1 | InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:Homeobox-like_sf | InterPro:Homeobox_CS | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR005539 | InterPro:KNOX2 | EnsemblPlantsGene:Os03g0772100 | EnsemblPlants:Os03t0772100-00 | PFAM:PF03789 | PFAM:PF03791 |
| PFAM:PF05920 | ScanProsite:PS00027 | PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF203 |
| SMART:SM00389 | SMART:SM01188 | SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI0003938E6D | SEG:seg |
Description
Similar to Homeobox protein knotted-1-like 8. (Os03t0772100-00)
Coordinates
chr3:+:31986608..31991587
Molecular Weight (calculated)
45723.6 Da
IEP (calculated)
9.349
GRAVY (calculated)
-0.373
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: EIISSFSLLG FVCYNNYYLS ALLHLITCPI GHGELRQSRR RWQQQHHSSV AGADPAGEPG PHLAAPVAVP AARRLGVVGA AWAWTPPRRR WRRSSSSCAG
101: TTGLAGGRGG GDEGRDHVAS AVLGSPRRLL RLQKGRGAAG CTDQAHGRAG GAAAAGRSRR PPSHGDLILL LSQDAYCSML TRYREELERP ILEAAEFFSL
201: IRSLLLFLTD SNCEGTGSSE EEQDTSCPEA EEIDPSDKQL KHQLLMKYGG SLGDLRQAFS KRTKKGKLPK EARLKLLHWW ELHYDKWPYP SVRTHIYASH
301: LINSTTFFCT KLDLMKMREL LGCTCVYEQE VEKMTLAQTT GLDQKQISNW FINQRKRHWK PTPVAGMTFP TVEAAGGGFR HSGHDGGLAA AAAAAALPLY
401: MGSWPFVVDG MYRLGS
101: TTGLAGGRGG GDEGRDHVAS AVLGSPRRLL RLQKGRGAAG CTDQAHGRAG GAAAAGRSRR PPSHGDLILL LSQDAYCSML TRYREELERP ILEAAEFFSL
201: IRSLLLFLTD SNCEGTGSSE EEQDTSCPEA EEIDPSDKQL KHQLLMKYGG SLGDLRQAFS KRTKKGKLPK EARLKLLHWW ELHYDKWPYP SVRTHIYASH
301: LINSTTFFCT KLDLMKMREL LGCTCVYEQE VEKMTLAQTT GLDQKQISNW FINQRKRHWK PTPVAGMTFP TVEAAGGGFR HSGHDGGLAA AAAAAALPLY
401: MGSWPFVVDG MYRLGS
001: MEEYQHDNST TPQRVSFLYS PISSSNKNDN TSDTNNNNNN NNSSNYGPGY NNTNNNNHHH QHMLFPHMSS LLPQTTENCF RSDHDQPNNN NNPSVKSEAS
101: SSRINHYSML MRAIHNTQEA NNNNNDNVSD VEAMKAKIIA HPHYSTLLQA YLDCQKIGAP PDVVDRITAA RQDFEARQQR STPSVSASSR DPELDQFMEA
201: YCDMLVKYRE ELTRPIQEAM EFIRRIESQL SMLCQSPIHI LNNPDGKSDN MGSSDEEQEN NSGGETELPE IDPRAEDREL KNHLLKKYSG YLSSLKQELS
301: KKKKKGKLPK EARQKLLTWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLQHPHHA ALYMDGHYMG DGPYRLGP
101: SSRINHYSML MRAIHNTQEA NNNNNDNVSD VEAMKAKIIA HPHYSTLLQA YLDCQKIGAP PDVVDRITAA RQDFEARQQR STPSVSASSR DPELDQFMEA
201: YCDMLVKYRE ELTRPIQEAM EFIRRIESQL SMLCQSPIHI LNNPDGKSDN MGSSDEEQEN NSGGETELPE IDPRAEDREL KNHLLKKYSG YLSSLKQELS
301: KKKKKGKLPK EARQKLLTWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW KPSEDMQFMV MDGLQHPHHA ALYMDGHYMG DGPYRLGP
Arabidopsis Description
KNAT1Homeobox protein knotted-1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P46639]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.