Factsheet for Os01t0848400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0848400-01
Os02t0182800-01
Os03t0673000-00
Os03t0673500-00
Os03t0727000-02
Os03t0727200-00
Os03t0771500-01
Os03t0772100-00
Os05t0455200-01
Os06t0646600-01
Os07t0129700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02030.1	Os03t0673000-00	AT4G08150.1	12897247
AT5G02030.1	Os03t0673500-00	AT4G08150.1	12897247
AT5G02030.1	Os03t0727000-02	AT4G08150.1	12897247
AT5G02030.1	Os03t0727200-00	AT4G08150.1	12897247
AT5G02030.1	Os03t0771500-01	AT4G08150.1	12897247
AT5G02030.1	Os03t0772100-00	AT4G08150.1	12897247
AT5G02030.1	Os07t0129700-01	AT4G08150.1	12897247
AT5G02030.1	Os03t0673000-00	AT4G08150.1	15019989
AT5G02030.1	Os03t0673500-00	AT4G08150.1	15019989
AT5G02030.1	Os03t0727000-02	AT4G08150.1	15019989
AT5G02030.1	Os03t0727200-00	AT4G08150.1	15019989
AT5G02030.1	Os03t0771500-01	AT4G08150.1	15019989
AT5G02030.1	Os03t0772100-00	AT4G08150.1	15019989
AT5G02030.1	Os07t0129700-01	AT4G08150.1	15019989
AT5G02030.1	Os03t0673000-00	AT4G08150.1	15781858
AT5G02030.1	Os03t0673500-00	AT4G08150.1	15781858
AT5G02030.1	Os03t0727000-02	AT4G08150.1	15781858
AT5G02030.1	Os03t0727200-00	AT4G08150.1	15781858
AT5G02030.1	Os03t0771500-01	AT4G08150.1	15781858
AT5G02030.1	Os03t0772100-00	AT4G08150.1	15781858
AT5G02030.1	Os07t0129700-01	AT4G08150.1	15781858
AT5G02030.1	Os02t0182800-01	AT4G32040.1	15781858
AT5G02030.1	Os06t0646600-01	AT4G32040.1	15781858
AT5G02030.1	Os01t0848400-01	AT5G02030.1	15781858
AT5G02030.1	Os05t0455200-01	AT5G02030.1	15781858
AT5G02030.1	Os02t0182800-01	AT5G25220.1	15781858
AT5G02030.1	Os06t0646600-01	AT5G25220.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03882	Sorghum	nucleus	77.12	79.6
Zm00001d042864_P002	Maize	nucleus	75.33	78.53
Os05t0455200-01	Rice	nucleus	68.14	71.9
HORVU3Hr1G072010.1	Barley	mitochondrion	14.87	71.09
TraesCS3D01G357400.1	Wheat	nucleus	71.73	70.47
TraesCS3A01G363900.1	Wheat	nucleus	72.22	70.38
TraesCS3B01G396100.1	Wheat	nucleus	71.24	70.32
GSMUA_Achr10P...	Banana	nucleus	10.78	64.71
GSMUA_Achr7P14960_001	Banana	nucleus	41.83	58.18
Solyc10g086640.1.1	Tomato	nucleus	21.24	50.39
GSMUA_Achr5P07020_001	Banana	nucleus	42.65	49.71
GSMUA_Achr10P...	Banana	plastid	7.19	45.36
Solyc09g011380.2.1	Tomato	nucleus	33.82	41.07
PGSC0003DMT400062353	Potato	nucleus	33.82	40.99
HORVU3Hr1G085720.1	Barley	nucleus, plastid	50.16	40.77
KRH00065	Soybean	nucleus	36.6	39.09
VIT_08s0007g01290.t01	Wine grape	nucleus	40.52	38.63
CDY10473	Canola	nucleus	36.11	38.43
AT5G02030.1	Thale cress	nucleus	35.95	38.26
KRH75724	Soybean	nucleus	37.75	37.93
CDY40327	Canola	nucleus	35.78	37.89
CDY69132	Canola	nucleus	35.46	37.8
KRH65931	Soybean	nucleus	38.07	37.76
CDY48107	Canola	nucleus	35.29	37.57
Bra009618.1-P	Field mustard	nucleus	35.95	37.54
Bra028883.1-P	Field mustard	nucleus	35.78	37.5
Bra005703.1-P	Field mustard	nucleus	34.8	37.37
PGSC0003DMT400049235	Potato	nucleus	34.15	36.35
CDY55113	Canola	nucleus	30.39	35.56
CDX80798	Canola	nucleus	30.23	34.77
VIT_13s0019g02450.t01	Wine grape	nucleus	25.0	30.72
Os03t0680700-00	Rice	nucleus	16.83	29.77
Os11t0158600-00	Rice	nucleus	19.12	27.86
Os06t0108900-02	Rice	nucleus	22.39	25.85
Os03t0124000-01	Rice	nucleus	24.67	25.55
Os10t0534900-01	Rice	nucleus	24.18	25.26
Os03t0165300-02	Rice	endoplasmic reticulum, vacuole	23.2	23.16
Os03t0732100-01	Rice	nucleus	28.59	22.15
Os12t0636200-01	Rice	nucleus	22.71	21.48
Os03t0680800-02	Rice	nucleus	22.22	20.15
Os02t0226600-01	Rice	nucleus	15.85	18.0
Os06t0562300-00	Rice	nucleus	14.22	15.96
Os11t0158832-00	Rice	nucleus	6.21	14.45

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	EntrezGene:4324855	EMBL:AB071331	ProteinID:ABW97420.1	ProteinID:ABW97421.1
ProteinID:ABW97422.1	ProteinID:ABW97423.1	ProteinID:ABW97424.1	ProteinID:BAB64282.1	ProteinID:BAB85945.1	ProteinID:BAF06718.1
ProteinID:BAI78168.1	ProteinID:BAI78169.1	ProteinID:BAI78170.1	ProteinID:BAI78171.1	ProteinID:BAI78172.1	ProteinID:BAI78173.1
ProteinID:BAI78174.1	ProteinID:BAI78175.1	ProteinID:BAI78176.1	ProteinID:BAI78177.1	ProteinID:BAI78178.1	ProteinID:BAI78179.1
ProteinID:BAI78180.1	ProteinID:BAI78181.1	ProteinID:BAI78182.1	ProteinID:BAI78183.1	ProteinID:BAI78184.1	ProteinID:BAI78185.1
ProteinID:BAI78186.1	ProteinID:BAS75222.1	ProteinID:EAZ14148.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	EnsemblPlantsGene:Os01g0848400	EnsemblPlants:Os01t0848400-01	PFAM:PF05920
PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF91	UniProt:Q941S9
SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI000009DE82	RefSeq:XP_015641948.1	SEG:seg

Description

Shattering (QTL)-1BEL1-type homeobox family, Seed shattering (Os01t0848400-01)

Coordinates

chr1:-:36445456..36449951

Molecular Weight (calculated)

65179.4 Da

IEP (calculated)

7.981

GRAVY (calculated)

-0.468

Length

612 amino acids

Sequence
(BLAST)

001: MSSAAGGGGY GGGQGGGAEH HHHHHGHAGH LLLHHHPQHV AGAAVAAAAA AAGGQMYHVP QHSRREKLRF PPDAGDSPPP HGHGHGHAPQ QQQQHGSWPP
101: PPAFYSYASS SSSYSPHSPT LAQAQLVAHG LAPPLPQIPT QNFSLSLSSA SSNPPPPQAQ PRRQLGGLAQ ATGPFGPFTG YAAVLGRSRF LGPAEKLFEE
201: ICDVGGAASH VDRTISDEGL LDADPMDGVD HDVVDHDLGG ADRAAADAGP ISGAEQQWKK TKLISMMEEV CKRYRQYYQQ VQAVMASFET VAGFSNAAPF
301: AALALRAMAK HFKCLKSMIL NQLRNTSNKV AVKDGLNKEI AVFGLAGGSS GGAGLQRANS ASAFGQPHNI WRPQRGLPER AVSVLRAWLF EHFLHPYPTD
401: GDKQMLAKQT GLTRNQVSNW FINARVRLWK PMVEEIHNLE MRQMHKHSVV DKGQHSVHHQ AQHSSQCSGN PSVPSDSHPG QSSSITRNHN TAASQGFPDE
501: LSQMSQSIQG QVSFAYNGLT SQHNIASPHH QHQQVGGVGI GGGNGGVSLT LGLHQNNRVC IAEPLPAALP ANLAHRFGLE EVSDAYVMSS FGGQDRHFGK
601: EIGGHLLHDF VG

Best Arabidopsis Sequence Match ( AT5G02030.1 )
(BLAST)

001: MADAYEPYHV LQQSRRDKLR IPSLDSHFHF HPPPPPSSGG GGGVFPLADS DFLAAGGFHS NNNNNHISNP SYSNFMGFLG GPSSSSSTAV AVAGDHSFNA
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG

Arabidopsis Description

BLH9BEL1-like homeodomain protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.