CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH00065
KRH02013
KRH11492
KRH36506
KRH51140
KRH61471
KRH65931
KRH73381
KRH75724

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02030.1	KRH02013	AT1G62360.1	12897247
AT5G02030.1	KRH11492	AT1G62360.1	12897247
AT5G02030.1	KRH36506	AT1G62360.1	12897247
AT5G02030.1	KRH51140	AT1G62360.1	12897247
AT5G02030.1	KRH73381	AT1G62360.1	12897247
AT5G02030.1	KRH02013	AT1G62360.1	15019989
AT5G02030.1	KRH11492	AT1G62360.1	15019989
AT5G02030.1	KRH36506	AT1G62360.1	15019989
AT5G02030.1	KRH51140	AT1G62360.1	15019989
AT5G02030.1	KRH73381	AT1G62360.1	15019989
AT5G02030.1	KRH02013	AT1G62360.1	15781858
AT5G02030.1	KRH11492	AT1G62360.1	15781858
AT5G02030.1	KRH36506	AT1G62360.1	15781858
AT5G02030.1	KRH51140	AT1G62360.1	15781858
AT5G02030.1	KRH73381	AT1G62360.1	15781858
AT5G02030.1	KRH02013	AT1G62360.1	16513846
AT5G02030.1	KRH11492	AT1G62360.1	16513846
AT5G02030.1	KRH36506	AT1G62360.1	16513846
AT5G02030.1	KRH51140	AT1G62360.1	16513846
AT5G02030.1	KRH73381	AT1G62360.1	16513846
AT5G02030.1	KRH61471	AT4G08150.1	12897247
AT5G02030.1	KRH61471	AT4G08150.1	15019989
AT5G02030.1	KRH61471	AT4G08150.1	15781858
AT5G02030.1	KRH00065	AT5G02030.1	15781858
AT5G02030.1	KRH65931	AT5G02030.1	15781858
AT5G02030.1	KRH75724	AT5G02030.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65931	Soybean	nucleus	94.75	93.52
KRH00065	Soybean	nucleus	65.68	69.81
VIT_08s0007g01290.t01	Wine grape	nucleus	66.34	62.93
GSMUA_Achr10P...	Banana	nucleus	9.36	55.88
Solyc10g086640.1.1	Tomato	nucleus	22.99	54.26
PGSC0003DMT400062353	Potato	nucleus	44.66	53.86
Solyc09g011380.2.1	Tomato	nucleus	44.17	53.37
HORVU3Hr1G072010.1	Barley	mitochondrion	10.67	50.78
AT5G02030.1	Thale cress	nucleus	46.63	49.39
CDY40327	Canola	nucleus	46.63	49.13
CDY10473	Canola	nucleus	46.14	48.87
Bra009618.1-P	Field mustard	nucleus	46.8	48.63
Bra005703.1-P	Field mustard	nucleus	45.16	48.25
PGSC0003DMT400049235	Potato	nucleus	45.48	48.17
CDY48107	Canola	nucleus	44.83	47.48
CDY69132	Canola	nucleus	44.66	47.39
Bra028883.1-P	Field mustard	nucleus	45.32	47.26
CDY55113	Canola	nucleus	39.9	46.46
CDX80798	Canola	nucleus	40.23	46.05
GSMUA_Achr10P...	Banana	plastid	7.06	44.33
GSMUA_Achr7P14960_001	Banana	nucleus	31.69	43.86
TraesCS1A01G281100.1	Wheat	nucleus	37.6	39.9
Os05t0455200-01	Rice	nucleus	37.77	39.66
TraesCS1D01G280300.1	Wheat	nucleus	37.27	39.62
EES18336	Sorghum	nucleus	36.95	39.47
TraesCS1B01G290200.1	Wheat	nucleus	37.27	39.14
Zm00001d042864_P002	Maize	nucleus	37.27	38.67
Zm00001d038355_P001	Maize	nucleus	36.45	38.54
EES03882	Sorghum	nucleus	36.95	37.94
Os01t0848400-01	Rice	nucleus	37.93	37.75
GSMUA_Achr5P07020_001	Banana	nucleus	32.18	37.33
Zm00001d010060_P001	Maize	nucleus	34.65	36.82
TraesCS3B01G396100.1	Wheat	nucleus	36.78	36.13
TraesCS3D01G357400.1	Wheat	nucleus	36.95	36.12
TraesCS3A01G363900.1	Wheat	nucleus	36.78	35.67
KRH26689	Soybean	nucleus	25.29	29.79
HORVU1Hr1G072850.1	Barley	nucleus, plastid	37.93	29.09
KRH61118	Soybean	nucleus	19.7	27.27
KRH51793	Soybean	nucleus	19.54	26.62
KRH77572	Soybean	nucleus	27.75	26.16
KRH59951	Soybean	nucleus	27.26	26.14
KRH41225	Soybean	nucleus	27.59	26.01
KRH76894	Soybean	nucleus	30.21	25.92
KRH27902	Soybean	nucleus	27.26	25.86
KRH28575	Soybean	nucleus	29.89	25.82
KRH72182	Soybean	nucleus	27.91	25.6
KRH32854	Soybean	nucleus	27.75	25.57
KRH69971	Soybean	nucleus	27.26	24.63
KRH22635	Soybean	nucleus	28.24	24.5
KRH25064	Soybean	nucleus	30.54	24.47
KRH68008	Soybean	nucleus	27.26	24.45
KRG96259	Soybean	nucleus	27.09	24.26
KRH51485	Soybean	nucleus	21.84	23.92
KRH30618	Soybean	nucleus	30.05	23.83
KRH08329	Soybean	nucleus	30.38	23.81
KRH22860	Soybean	nucleus	30.54	23.66
HORVU3Hr1G085720.1	Barley	nucleus, plastid	29.23	23.64
KRG88864	Soybean	nucleus	29.39	23.43
KRH05875	Soybean	nucleus	23.32	23.24
KRH25319	Soybean	nucleus	28.24	23.21
KRH26495	Soybean	nucleus	30.21	23.17
KRH15136	Soybean	nucleus	23.65	22.64
KRH51792	Soybean	nucleus	22.99	21.98
KRH60794	Soybean	nucleus	23.65	21.75
KRH61114	Soybean	nucleus	22.82	21.52
KRH52190	Soybean	nucleus	17.57	19.49
KRH61499	Soybean	nucleus	16.91	17.91
KRH05496	Soybean	nucleus	16.58	17.69

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100805512	MapMan:15.5.3.5	EMBL:ACUP02000466	EnsemblPlantsGene:GLYMA_01G104200	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356	UniProt:K7K312
EnsemblPlants:KRH75724	ProteinID:KRH75724	ProteinID:KRH75724.1	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom
PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF82	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689
UniParc:UPI00023372DD	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:35104008..35110820

Molecular Weight (calculated)

66889.7 Da

IEP (calculated)

7.008

GRAVY (calculated)

-0.507

Length

609 amino acids

Sequence
(BLAST)

001: MAEGFEAYHV PQQSRRDKLR VVATQNQHGL VEPSSLLPLY DPSSFISSDL LTSFHNGQKH NLGCGMKEER ANLMMGFAAA AGGGGVMNNG SSSSCCSSNS
101: SSVSYLDPES SLPLNQATIQ VINNSNNNNM FLYQAQNLRE FDQGYNNNNN NNSEIMVFKP EPLSLSLSSH NNGVNLQRYG SVVYGDKVGG VGGGGGGGVV
201: IYGGSGLNEV SRCTVPMGPF TGYASILKGS RFLKPAQQLL EELCDVGGVC AEKIVADASL MEPIPPESSS EDPLGDHGGD QGRKKSRLLT MLDEVYRRYR
301: QYYQQMQAVV TSFEYVSGLS NAAPYASLAI KAMSKHFRCL KNAITDQIQF ANKAHFHISN RKDESPRFGN SDRGPYGQRP GFLEHQPVWR PQRGLPERAV
401: TVLRAWLFEH FLHPYPTDTD KLMLAKQTGL SRSQVSNWFI NARVRLWKPM VEEIHMLETR QAPKNLQKEE HCTNKPSDHL PSDNSIVSEN PSTSTDKFQE
501: APYKRAINEL PNIPVRTQEQ LNLPCTSNQP GGVGVSMGGS ASNSVSLTLG LYQNHGIGLA EPFPLNAAQR FGVALETNNE GYVMSDYESQ NRHFGRDVIG
601: GQLLHDFVG

Best Arabidopsis Sequence Match ( AT5G02030.1 )
(BLAST)

001: MADAYEPYHV LQQSRRDKLR IPSLDSHFHF HPPPPPSSGG GGGVFPLADS DFLAAGGFHS NNNNNHISNP SYSNFMGFLG GPSSSSSTAV AVAGDHSFNA
101: GLSSGDVLVF KPEPLSLSLS SHPRLAYDLV VPGVVNSGFC RSAGEANAAA VTIASRSSGP LGPFTGYASI LKGSRFLKPA QMLLDEFCNV GRGIYTDKVI
201: DDDDSSLLFD PTVENLCGVS DGGGGDNGKK KSKLISMLDE VYKRYKQYYE QLQAVMGSFE CVAGLGHAAP YANLALKALS KHFKCLKNAI TDQLQFSHNN
301: KIQQQQQCGH PMNSENKTDS LRFGGSDSSR GLCSAGQRHG FPDHHAPVWR PHRGLPERAV TVLRAWLFDH FLHPYPTDTD KLMLAKQTGL SRNQVSNWFI
401: NARVRVWKPM VEEIHMLETR QSQRSSSSSW RDERTSTTVF PDNSNNNPSS SSAQQRPNNS SPPRRARNDD VHGTNNNNSY VNSGSGGGSA VGFSYGIGSS
501: NVPVMNSSTN GGVSLTLGLH HQIGLPEPFP MTTAQRFGLD GGSGDGGGGY EGQNRQFGRD FIGGSNHQFL HDFVG

Arabidopsis Description

BLH9BEL1-like homeodomain protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.