CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32854	Soybean	nucleus	93.83	94.25
KRG96259	Soybean	nucleus	76.36	74.56
KRH68008	Soybean	nucleus	76.2	74.52
VIT_08s0105g00230.t01	Wine grape	nucleus	59.19	62.98
KRH26689	Soybean	nucleus	46.84	60.15
CDY32069	Canola	nucleus	54.67	57.08
CDY40420	Canola	nucleus	53.77	56.49
Bra017277.1-P	Field mustard	nucleus	57.38	56.44
PGSC0003DMT400054945	Potato	nucleus	59.49	56.11
CDX84585	Canola	nucleus	56.33	55.74
AT2G35940.3	Thale cress	nucleus	56.63	55.29
Solyc01g007070.2.1	Tomato	nucleus	58.28	55.29
CDX84171	Canola	nucleus	48.04	54.25
CDX79646	Canola	nucleus	56.17	53.98
CDX75085	Canola	nucleus	50.15	53.03
Bra005310.1-P	Field mustard	nucleus	50.0	52.87
KRH22635	Soybean	nucleus	55.72	52.71
Bra023045.1-P	Field mustard	nucleus	51.51	52.37
Os11t0158600-00	Rice	nucleus	30.12	47.62
KRH25319	Soybean	nucleus	52.11	46.69
KRG88864	Soybean	nucleus	52.71	45.81
Zm00001d053151_P003	Maize	nucleus	43.98	43.52
TraesCS4A01G200800.1	Wheat	nucleus	43.37	43.37
TraesCS4D01G111900.1	Wheat	nucleus	43.07	43.07
TraesCS4B01G114600.1	Wheat	nucleus	42.77	42.9
EES09309	Sorghum	nucleus	44.43	42.75
HORVU4Hr1G020710.1	Barley	nucleus	32.23	41.15
GSMUA_Achr2P06410_001	Banana	nucleus	8.58	39.31
Os11t0158832-00	Rice	nucleus	14.76	37.26
KRH61118	Soybean	nucleus	23.8	35.91
KRH51485	Soybean	nucleus	29.37	35.07
KRH51793	Soybean	nucleus	23.49	34.9
KRH60794	Soybean	nucleus	34.79	34.89
KRH05875	Soybean	nucleus	30.12	32.73
KRH51792	Soybean	nucleus	30.87	32.18
KRH15136	Soybean	nucleus	30.72	32.08
KRH61114	Soybean	nucleus	31.17	32.04
KRH00065	Soybean	nucleus	26.05	30.19
KRH77572	Soybean	nucleus	29.07	29.88
KRH27902	Soybean	nucleus	28.77	29.75
KRH41225	Soybean	nucleus	27.86	28.64
KRH59951	Soybean	nucleus	27.11	28.35
KRH75724	Soybean	nucleus	25.6	27.91
KRH28575	Soybean	nucleus	29.52	27.8
KRH76894	Soybean	nucleus	29.67	27.75
KRH65931	Soybean	nucleus	25.75	27.71
KRH69971	Soybean	nucleus	26.2	25.82
KRH08329	Soybean	nucleus	29.97	25.61
KRH52190	Soybean	nucleus	19.43	23.5
KRH25064	Soybean	nucleus	26.51	23.16
KRH30618	Soybean	nucleus	25.75	22.27
KRH22860	Soybean	nucleus	25.75	21.76
KRH26495	Soybean	nucleus	25.9	21.66
KRH61499	Soybean	nucleus	18.37	21.22
KRH05496	Soybean	nucleus	18.22	21.19

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100810851	MapMan:15.5.3.5	EMBL:ACUP02001178	ncoils:Coil	EnsemblPlantsGene:GLYMA_02G196500
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	UniProt:I1JGH7
InterPro:IPR001356	EnsemblPlants:KRH72182	ProteinID:KRH72182	ProteinID:KRH72182.1	ProteinID:KRH72183.1	ProteinID:KRH72184.1
PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF135
SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI0002337452	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:37250175..37255107

Molecular Weight (calculated)

72488.0 Da

IEP (calculated)

7.397

GRAVY (calculated)

-0.594

Length

664 amino acids

Sequence
(BLAST)

001: MATYFHSNSE IQAGADGLQT LVLMNPGYVQ YSDTPPPPHG GNLVFLNSAA GNASLQNLSH APPPHTQQFV GVPLSAAAAH EPPPPPASMH HDVSALHGFL
101: PRMQYSLWNT IDPNAAAREA PRATQGLSLS LHGEEVRASP SSASGASNGG GVAGIQSVLL SSKYLKATQE LLDEVVNVNS GIKVEQTKKL CFEKTKVVGE
201: SSTAASGGDG SVGGEGSGKR SSELSTTERQ EIQMKKAKLI NMLDEVEQRY RQYHSQMQIV ISSFEQAAGI GSARTYTALA LQTISKQFRC LKDAITGQIR
301: AANKSLGEED CFGAKIEGSR LKYVDHHLRQ QRAIQQLGMI NHNAWRPQRG LPERSVSVLR AWLFEHFLHP YPKDSDKHML AKQTGLTRSQ VSNWFINARV
401: RLWKPMVEEM YLEEMKDHEL NGSEEKSSKN GEDPATKTST PQEKRAASEI ESKSFNSKQD VSKNQNTPIV STSPPSTSPV GGSVKNQSGF SFMGSSELDG
501: ITQGSPKKPR NHEILRSPNR VPSINMDVKA NEANNEQQLS MDLERQNRDG YTFMGNQTNF ISGFGQYPME EIGRFDAEQF TPRFSGNNGV SLTLGLPHCD
601: TLSGTHQSFL PNQNIQLGRG LDIGEPNQFG ALNNSTSHSS AAFESINMQN PKRFAAQLLP DFVA

Best Arabidopsis Sequence Match ( AT2G35940.3 )
(BLAST)

001: MAAYFHGNPP EISAGSDGGL QTLILMNPTT YVQYTQQDND SNNNNNSNNS NNNNTNTNTN NNNSSFVFLD SHAPQPNASQ QFVGIPLSGH EAASITAADN
101: ISVLHGYPPR VQYSLYGSHQ VDPTHQQAAC ETPRAQQGLS LTLSSQQQQQ QQHHQQHQPI HVGFGSGHGE DIRVGSGSTG SGVTNGIANL VSSKYLKAAQ
201: ELLDEVVNAD SDDMNAKSQL FSSKKGSCGN DKPVGESSAG AGGEGSGGGA EAAGKRPVEL GTAERQEIQM KKAKLSNMLH EVEQRYRQYH QQMQMVISSF
301: EQAAGIGSAK SYTSLALKTI SRQFRCLKEA IAGQIKAANK SLGEEDSVSG VGRFEGSRLK FVDHHLRQQR ALQQLGMIQH PSNNAWRPQR GLPERAVSVL
401: RAWLFEHFLH PYPKDSDKHM LAKQTGLTRS QVSNWFINAR VRLWKPMVEE MYMEEMKEQA KNMGSMEKTP LDQSNEDSAS KSTSNQEKSP MADTNYHMNP
501: NHNGDLEGVT GMQGSPKRLR TSDETMMQPI NADFSSNEKL TMKILEERQG IRSDGGYPFM GNFGQYQMDE MSRFDVVSDQ ELMAQRYSGN NNGVSLTLGL
601: PHCDSLSSTH HQGFMQTHHG IPIGRRVKIG ETEEYGPATI NGGSSTTTAH SSAAAAAAYN GMNIQNQKRY VAQLLPDFVA

Arabidopsis Description

BLH1BEL1-like homeodomain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ56]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.