CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22635	Soybean	nucleus	93.42	68.8
KRH25319	Soybean	nucleus	73.11	51.01
KRG88864	Soybean	nucleus	74.85	50.65
VIT_06s0009g00410.t01	Wine grape	nucleus	67.89	48.21
KRH72182	Soybean	nucleus	60.15	46.84
Os11t0158600-00	Rice	nucleus	37.52	46.19
KRH32854	Soybean	nucleus	58.99	46.14
KRH68008	Soybean	nucleus	58.8	44.77
KRG96259	Soybean	nucleus	58.22	44.26
PGSC0003DMT400015183	Potato	nucleus	54.55	41.23
Solyc06g074120.2.1	Tomato	nucleus	55.51	41.06
Solyc11g068950.1.1	Tomato	nucleus	52.03	40.7
PGSC0003DMT400050527	Potato	nucleus	53.58	39.24
TraesCS4B01G114600.1	Wheat	nucleus	45.65	35.65
TraesCS4D01G111900.1	Wheat	nucleus	45.65	35.54
Zm00001d053151_P003	Maize	nucleus	46.03	35.47
TraesCS4A01G200800.1	Wheat	nucleus	45.45	35.39
EES09309	Sorghum	nucleus	45.84	34.35
AT2G27220.2	Thale cress	nucleus	28.82	33.18
CDX77099	Canola	nucleus	28.43	32.74
Bra034335.1-P	Field mustard	nucleus	28.24	32.59
CDY30566	Canola	nucleus	28.24	32.59
HORVU4Hr1G020710.1	Barley	nucleus	32.11	31.92
KRH61118	Soybean	nucleus	25.73	30.23
KRH51793	Soybean	nucleus	25.73	29.75
KRH05875	Soybean	nucleus	35.01	29.62
KRH51792	Soybean	nucleus	36.17	29.36
KRH61114	Soybean	nucleus	36.56	29.26
KRH15136	Soybean	nucleus	35.98	29.25
KRH51485	Soybean	nucleus	30.95	28.78
KRH60794	Soybean	nucleus	35.4	27.64
KRH00065	Soybean	nucleus	29.21	26.35
KRH77572	Soybean	nucleus	32.69	26.16
KRH27902	Soybean	nucleus	32.3	26.01
KRH59951	Soybean	nucleus	31.14	25.35
KRH75724	Soybean	nucleus	29.79	25.29
KRH28575	Soybean	nucleus	34.43	25.25
KRH76894	Soybean	nucleus	34.24	24.93
KRH41225	Soybean	nucleus	30.75	24.61
KRH65931	Soybean	nucleus	29.21	24.47
KRH69971	Soybean	nucleus	29.4	22.55
KRH08329	Soybean	nucleus	33.08	22.01
KRH25064	Soybean	nucleus	30.75	20.92
KRH52190	Soybean	nucleus	21.66	20.4
KRH30618	Soybean	nucleus	30.17	20.31
KRH22860	Soybean	nucleus	28.05	18.45
KRH26495	Soybean	nucleus	28.05	18.26
KRH61499	Soybean	nucleus	20.31	18.26
KRH05496	Soybean	nucleus	19.34	17.51
Os11t0158832-00	Rice	nucleus	8.9	17.49

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	EMBL:ACUP02007743	ncoils:Coil	EnsemblPlantsGene:GLYMA_12G188800	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	UniProt:I1LTZ9	InterPro:IPR001356
EnsemblPlants:KRH26689	ProteinID:KRH26689	ProteinID:KRH26689.1	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom
PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF196	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689
UniParc:UPI00023D1319	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:35041693..35045547

Molecular Weight (calculated)

57103.2 Da

IEP (calculated)

9.307

GRAVY (calculated)

-0.732

Length

517 amino acids

Sequence
(BLAST)

001: MGSNYLKAAQ ELLDEAVNVG KGIYKEEKFA EKVKANREST NSGAAGGGDG SSGGGENSAG KQVVELSTAQ RQELQMKKSK LVSMLDEVEQ RYRQYHHQMQ
101: IVVSSFEQAA GYGAAKSYTA LALKTISKQF RCLKDAISAQ IKATSKTLGE DDCLGVKVEG SRLRYVDHHL RQQRALQQLG MIQPNAWRPQ RGLPERAVSI
201: LRAWLFEHFL HPYPKDSDKV MLAKQTGLSR SQVSNWFINA RVRLWKPMVE EMYLEEIKEH EQGNASENTK SKESSKELGS TANVAPESGA IKLDHLQSKQ
301: ESFKHQNTSP TEISTNSSMS PMGGSLQSPS GFHLAGSSDM QIRSPKKPRS SEIQNSPSSI LSVGMEMKHN NNGDHANNRE ANNTKFGNER HHQKDGYPLM
401: TSNANHGGGF GAFTMEDMGS RFNVTTEQLA SRFHGNGVSL TLGLPHNENL SMPGTQQHGF LSQNIHLGRR LEMGTNGNEF CAINTPPSSH SGTTYESIDI
501: QNRKRFVAHQ LLPDFVA

Best Arabidopsis Sequence Match ( AT2G16400.1 )
(BLAST)

001: MATYYKTGSS EIYSRPEFVP GNAMNYTNSF TETFPRDSTN NVSPSKEIQV LSSLGGVSQM VEIQDSGSWR DQEDNDRNRF PVMRRLGLSS QIETSRGNNN
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA

Arabidopsis Description

BLH7BEL1-like homeodomain protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.