Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400015183 | Potato | nucleus | 92.85 | 94.88 |
KRH26689 | Soybean | nucleus | 41.06 | 55.51 |
Solyc11g068950.1.1 | Tomato | nucleus | 49.21 | 52.04 |
KRH22635 | Soybean | nucleus | 49.36 | 49.15 |
VIT_06s0009g00410.t01 | Wine grape | nucleus | 50.93 | 48.9 |
KRH25319 | Soybean | nucleus | 46.78 | 44.13 |
Solyc10g086640.1.1 | Tomato | nucleus | 16.17 | 43.8 |
KRG88864 | Soybean | nucleus | 46.92 | 42.93 |
Solyc01g007070.2.1 | Tomato | nucleus | 42.63 | 42.57 |
Os11t0158600-00 | Rice | nucleus | 25.46 | 42.38 |
HORVU4Hr1G020710.1 | Barley | nucleus | 30.47 | 40.96 |
TraesCS4D01G111900.1 | Wheat | nucleus | 38.48 | 40.51 |
TraesCS4B01G114600.1 | Wheat | nucleus | 38.34 | 40.48 |
TraesCS4A01G200800.1 | Wheat | nucleus | 38.34 | 40.36 |
EES09309 | Sorghum | nucleus | 38.77 | 39.28 |
Zm00001d053151_P003 | Maize | nucleus | 37.63 | 39.2 |
Os11t0158832-00 | Rice | nucleus | 13.3 | 35.36 |
AT2G27220.2 | Thale cress | nucleus | 22.03 | 34.3 |
Bra034335.1-P | Field mustard | nucleus | 21.6 | 33.71 |
CDY30566 | Canola | nucleus | 21.6 | 33.71 |
CDX77099 | Canola | nucleus | 21.6 | 33.63 |
Solyc01g109980.2.1 | Tomato | nucleus | 30.62 | 33.18 |
Solyc04g080790.2.1 | Tomato | nucleus | 31.19 | 32.98 |
Solyc04g080780.2.1 | Tomato | nucleus | 18.6 | 32.5 |
Solyc09g011380.2.1 | Tomato | nucleus | 21.75 | 30.16 |
Solyc08g081400.2.1 | Tomato | nucleus | 26.18 | 28.42 |
Solyc11g069890.1.1 | Tomato | golgi | 22.75 | 27.41 |
Solyc02g065490.2.1 | Tomato | nucleus | 23.61 | 26.44 |
Solyc04g079830.2.1 | Tomato | nucleus | 25.32 | 25.58 |
Solyc02g089940.2.1 | Tomato | nucleus | 26.47 | 25.48 |
Solyc08g065420.2.1 | Tomato | nucleus | 16.02 | 20.04 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.3.5 | EMBL:AF375966 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 |
InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF135 | UniProt:Q7Y0Z7 | SMART:SM00389 |
SMART:SM00574 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc06g074120.2 | EnsemblPlants:Solyc06g074120.2.1 | UniParc:UPI00001A2F41 | SEG:seg |
Description
Bell-like homeodomain protein 2 [Source:UniProtKB/TrEMBL;Acc:Q7Y0Z7]
Coordinates
chr6:+:45842057..45846764
Molecular Weight (calculated)
77667.0 Da
IEP (calculated)
7.377
GRAVY (calculated)
-0.706
Length
699 amino acids
Sequence
(BLAST)
(BLAST)
001: MYYQGTSDNN IQADHHQQQH NNLGNSNNNI QTLYLMNPNS YMQGYTTTDT QQHLQQQQNQ HQLLFLNSAP AGGNALSHAN IQHAPLQQQH FVGVPLPAVS
101: LHDQINHHGL LQRMWNNQDQ SQQVIVPSST VVSATSCGGT TTDLASQLAF QRPIVVSPTP QHRQQQQQQG GLSLSLSPQQ QQQISFNNNI SSSSPRTNNV
201: TIRGTMDGCS SNMILGSKYL KAAQELLDEV VNIVGKSNKG DDQKKDNSMN KELIPLVSDV NTNSSGGGGG ESSSRQKNEV AIELTTAQRQ ELQMKKAKLL
301: AMLEEVEQRY RQYHHQMQII VSSFEQVAGV GSAKSYTQLA LHAISKQFRC LKDAISEQVK ATSKSLGEDE GLGGKIEGSR LKFVDHHLRQ QRALQQLGMM
401: QPNAWRPQRG LPERAVSVLR AWLFEHFLHP YPKDSDKIML AKQTGLTRSQ VSNWFINARV RLWKPMVEEM YLEEVKNQEQ NSSNTSGDNK NKETNISAPN
501: EEKQPIITSS LLQDGTTQAE ISTSTISTSP TAGASLHHAH NFSFLGSFNM ENTTTTVDHI ENNAKKPRNH DMHKFSPSSI LSSVEMEAKA RESTNKGFTN
601: PLMAAYAMGD FGRFDPHDQQ MTANFHGNNG VSLTLGLPPS ENLAMPVSQQ NYLSNELGSR PEIGSHYNRM GYENIDFQSG NKRFPTQLLP DFVTGNLGT
101: LHDQINHHGL LQRMWNNQDQ SQQVIVPSST VVSATSCGGT TTDLASQLAF QRPIVVSPTP QHRQQQQQQG GLSLSLSPQQ QQQISFNNNI SSSSPRTNNV
201: TIRGTMDGCS SNMILGSKYL KAAQELLDEV VNIVGKSNKG DDQKKDNSMN KELIPLVSDV NTNSSGGGGG ESSSRQKNEV AIELTTAQRQ ELQMKKAKLL
301: AMLEEVEQRY RQYHHQMQII VSSFEQVAGV GSAKSYTQLA LHAISKQFRC LKDAISEQVK ATSKSLGEDE GLGGKIEGSR LKFVDHHLRQ QRALQQLGMM
401: QPNAWRPQRG LPERAVSVLR AWLFEHFLHP YPKDSDKIML AKQTGLTRSQ VSNWFINARV RLWKPMVEEM YLEEVKNQEQ NSSNTSGDNK NKETNISAPN
501: EEKQPIITSS LLQDGTTQAE ISTSTISTSP TAGASLHHAH NFSFLGSFNM ENTTTTVDHI ENNAKKPRNH DMHKFSPSSI LSSVEMEAKA RESTNKGFTN
601: PLMAAYAMGD FGRFDPHDQQ MTANFHGNNG VSLTLGLPPS ENLAMPVSQQ NYLSNELGSR PEIGSHYNRM GYENIDFQSG NKRFPTQLLP DFVTGNLGT
001: MATYYKTGSS EIYSRPEFVP GNAMNYTNSF TETFPRDSTN NVSPSKEIQV LSSLGGVSQM VEIQDSGSWR DQEDNDRNRF PVMRRLGLSS QIETSRGNNN
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA
Arabidopsis Description
BLH7BEL1-like homeodomain protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIW1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.