Factsheet for HORVU4Hr1G020710.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0158832-00	Rice	nucleus	35.38	69.96
TraesCS4B01G114600.1	Wheat	nucleus	82.69	64.95
TraesCS4A01G200800.1	Wheat	nucleus	82.88	64.91
TraesCS4D01G111900.1	Wheat	nucleus	82.88	64.91
Zm00001d053151_P003	Maize	nucleus	62.69	48.58
EES09309	Sorghum	nucleus	62.88	47.39
GSMUA_Achr10P...	Banana	nucleus	35.19	43.78
GSMUA_Achr6P07130_001	Banana	nucleus	38.08	40.33
Os11t0158600-00	Rice	nucleus	30.38	37.62
GSMUA_Achr6P18180_001	Banana	nucleus	41.15	33.75
HORVU3Hr1G072010.1	Barley	mitochondrion	8.27	33.59
KRH72182	Soybean	nucleus	41.15	32.23
KRH26689	Soybean	nucleus	31.92	32.11
KRH32854	Soybean	nucleus	40.77	32.07
KRH68008	Soybean	nucleus	41.35	31.66
CDX84171	Canola	nucleus	35.77	31.63
KRG96259	Soybean	nucleus	41.15	31.47
CDY32069	Canola	nucleus	38.46	31.45
PGSC0003DMT400015183	Potato	nucleus	41.15	31.29
Bra005310.1-P	Field mustard	nucleus	37.69	31.21
CDX75085	Canola	nucleus	37.69	31.21
VIT_06s0009g00410.t01	Wine grape	nucleus	43.65	31.18
KRH22635	Soybean	nucleus	41.73	30.91
CDY40420	Canola	nucleus	37.5	30.85
Solyc06g074120.2.1	Tomato	nucleus	40.96	30.47
CDX84585	Canola	nucleus	39.23	30.4
Bra017277.1-P	Field mustard	nucleus	39.23	30.22
AT2G35940.3	Thale cress	nucleus	39.23	30.0
CDX79646	Canola	nucleus	39.04	29.38
PGSC0003DMT400050527	Potato	nucleus	39.81	29.32
Solyc01g007070.2.1	Tomato	nucleus	38.85	28.86
PGSC0003DMT400054945	Potato	nucleus	38.85	28.69
HORVU4Hr1G003750.1	Barley	nucleus	18.85	28.66
Bra023045.1-P	Field mustard	nucleus	35.96	28.64
KRH25319	Soybean	nucleus	40.38	28.34
Solyc11g068950.1.1	Tomato	nucleus	35.77	28.14
HORVU4Hr1G074250.1	Barley	nucleus	31.73	28.01
KRG88864	Soybean	nucleus	41.15	28.01
VIT_08s0105g00230.t01	Wine grape	nucleus	33.27	27.72
HORVU5Hr1G001090.1	Barley	nucleus	32.12	25.73
Bra034335.1-P	Field mustard	nucleus	21.73	25.22
CDY30566	Canola	nucleus	21.73	25.22
HORVU4Hr1G003800.7	Barley	nucleus	31.15	25.16
CDX77099	Canola	nucleus	21.54	24.94
AT2G27220.2	Thale cress	nucleus	20.96	24.28
HORVU1Hr1G049760.1	Barley	nucleus	23.65	20.64
HORVU4Hr1G084590.2	Barley	nucleus	22.12	18.49
HORVU4Hr1G010430.6	Barley	nucleus	28.27	18.17
HORVU1Hr1G072850.1	Barley	nucleus, plastid	22.69	14.86
HORVU7Hr1G088090.4	Barley	nucleus	15.77	14.8
HORVU3Hr1G085720.1	Barley	nucleus, plastid	20.19	13.94

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	UniProt:A0A287NH95	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU4Hr1G020710	EnsemblPlants:HORVU4Hr1G020710.1	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom	InterPro:IPR001356
PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850	PANTHER:PTHR11850:SF135
SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI000B47E2C4	SEG:seg	:

Description

No Description!

Coordinates

chrchr4H:-:103262834..103267863

Molecular Weight (calculated)

50053.5 Da

IEP (calculated)

6.903

GRAVY (calculated)

-0.582

Length

520 amino acids

Sequence
(BLAST)

001: MAAYYHGGTG TDIHQAGSDG LQTLYLMNPS YGTGGYGDAA PSGANMMLLN SSVSSMTPAS FGGHQASPPP PPGQHFVGIP LQAPPSGYNL WTPTTTGIAD
101: VMSPPTQQAH GVSAVLSLSS RETPPVTVAS IAGDEGRYQL GATTAASQGQ VVMNSKYLRA AQELLDEVVS VSKGVDDVDA KAKSSALVKK KEDSEGLSGG
201: GGEDGASGAK EGAPAPEMST AERQELQMKK GKLVNMLDEV EQRYRQYHQQ MASVSSSFEA VAXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXLGGGRGVG SRLRYIDHQL RQQRALQQLG MMQSSAWRPQ RGLPERSVSI LRAWLFEHFL HPYPKDSDKI MLAKQTGLTR SQVSNWFINA
401: RVRLWKPMVE EMYLEETKEH QQQQDGGDDK DRPSGSGPAG GKSSSHADGV DDGTPRSMSM SRAVAGAGTS EGGGAVQASM LGLAGDHQAH AGFYHDEDED
501: XTRRQPRRRR PQPQGSSTTR

Best Arabidopsis Sequence Match ( AT1G75410.1 )
(BLAST)

001: MAVYYPNSVG MQSLYQESIY LNEQQQQQQQ ASSSSAASFS EIVSGDVRNN EMVFIPPTSD VAVNGNVTVS SNDLSFHGGG LSLSLGNQIQ SAVSVSPFQY
101: HYQNLSNQLS YNNLNPSTMS DENGKSLSVH QHHSDQILPS SVYNNNGNNG VGFYNNYRYE TSGFVSSVLR SRYLKPTQQL LDEVVSVRKD LKLGNKKMKN
201: DKGQDFHNGS SDNITEDDKS QSQELSPSER QELQSKKSKL LTMVDEVDKR YNQYHHQMEA LASSFEMVTG LGAAKPYTSV ALNRISRHFR CLRDAIKEQI
301: QVIRGKLGER ETSDEQGERI PRLRYLDQRL RQQRALHQQL GMVRPAWRPQ RGLPENSVSI LRAWLFEHFL HPYPKESEKI MLSKQTGLSK NQVANWFINA
401: RVRLWKPMIE EMYKEEFGES AELLSNSNQD TKKMQETSQL KHEDSSSSQQ QNQGNNNNNI PYTSDAEQNL VFADPKPDRA TTGDYDSLMN YHGFGIDDYN
501: RYVGLGNQQD GRYSNPHQLH DFVV

Arabidopsis Description

BLH3BEL1-like homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWS9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.