Factsheet for HORVU4Hr1G074250.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G279300.1	Wheat	nucleus	96.26	96.59
TraesCS4B01G280700.1	Wheat	nucleus	95.76	95.92
TraesCS4A01G022700.1	Wheat	nucleus	95.76	95.43
Os03t0165300-02	Rice	endoplasmic reticulum, vacuole	73.01	70.15
EER92806	Sorghum	nucleus	69.27	69.15
Zm00001d027802_P002	Maize	nucleus	66.89	67.12
HORVU3Hr1G072010.1	Barley	mitochondrion	8.32	38.28
HORVU4Hr1G003800.7	Barley	nucleus	40.24	36.8
HORVU5Hr1G001090.1	Barley	nucleus	40.07	36.36
HORVU4Hr1G003750.1	Barley	nucleus	19.35	33.33
HORVU4Hr1G020710.1	Barley	nucleus	28.01	31.73
HORVU4Hr1G084590.2	Barley	nucleus	27.67	26.21
HORVU1Hr1G049760.1	Barley	nucleus	26.49	26.17
HORVU4Hr1G010430.6	Barley	nucleus	29.37	21.38
HORVU1Hr1G072850.1	Barley	nucleus, plastid	23.6	17.51
HORVU3Hr1G085720.1	Barley	nucleus, plastid	21.05	16.47
HORVU7Hr1G088090.4	Barley	nucleus	13.24	14.08
GSMUA_Achr11P...	Banana	plastid	8.66	12.5

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.5	EMBL:AK367579	ncoils:Coil	UniProt:F2DUL1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G074250	EnsemblPlants:HORVU4Hr1G074250.1	InterPro:Homeobox-like_sf	InterPro:Homeobox_KN_domain	InterPro:Homeobox_dom
InterPro:IPR001356	PFAM:PF05920	PFAM:PF07526	InterPro:POX_dom	PFscan:PS50071	PANTHER:PTHR11850
PANTHER:PTHR11850:SF139	SMART:SM00389	SMART:SM00574	SUPFAM:SSF46689	UniParc:UPI000200728D	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DUL1]

Coordinates

chrchr4H:-:593589147..593593613

Molecular Weight (calculated)

62851.0 Da

IEP (calculated)

6.202

GRAVY (calculated)

-0.566

Length

589 amino acids

Sequence
(BLAST)

001: MATFFSASND QRGLAGGGGG GADMSFHHHY PMSNQYPDSS TGGLIPLPAS IVQQSHIAHG GGGDGGDDEQ AAFMNSRDGA EIGGLQTQML MGDGGASAGQ
101: RSHQGGLSLS LGSQVPVSLY QYGRPGGMTA AASPSLMSPN QSAMAMAASR NAQVNVYVQN SRFLKAAREL LDEVVSVRDA IKRKGDRKDD SAGNGECGKV
201: EGDKGDENEG SSTAELSPAE RQDLQNKVTA LMAMLDQVDR RYRHYHQQMQ MVVSSFDAVA GSGAARPYTA LALQTISRHF RSLRDAIGAQ VQSARRSLGE
301: PQDGSGAGGL SRLRYIDQHL RQQRAMQQFG MMQQPQHAWR PQRGLPESAV SVLRAWLFEH FLHPYPKDSE KVMLARQAGL SRGQVSNWFI NARVRLWKPM
401: VEEMYKEEFG AEMDSTNSSS ENAGNNKHGK VDEAACSEDQ DRDEFQSTSA HAGASQLLIA YKSEPVASMD AGPLSSLGGG DMGTTYAPGG LSLNHHGPGG
501: GSLLQDAFAH HGDDARFVGY GGNMGDLGGS VSLTLGLQHC NNNSNAGHVP PEQQGLLYGN PGDFDFLNGA DDRQRFASSS SQLLHDFVT

Best Arabidopsis Sequence Match ( AT2G16400.1 )
(BLAST)

001: MATYYKTGSS EIYSRPEFVP GNAMNYTNSF TETFPRDSTN NVSPSKEIQV LSSLGGVSQM VEIQDSGSWR DQEDNDRNRF PVMRRLGLSS QIETSRGNNN
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA

Arabidopsis Description

BLH7BEL1-like homeodomain protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.