Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G279300.1 | Wheat | nucleus | 97.12 | 97.79 |
| TraesCS4B01G280700.1 | Wheat | nucleus | 96.79 | 97.28 |
| HORVU4Hr1G074250.1 | Barley | nucleus | 95.43 | 95.76 |
| Os03t0165300-02 | Rice | endoplasmic reticulum, vacuole | 72.76 | 70.15 |
| EER92806 | Sorghum | nucleus | 68.87 | 68.98 |
| Zm00001d027802_P002 | Maize | nucleus | 65.99 | 66.44 |
| TraesCS4A01G289400.1 | Wheat | nucleus | 39.93 | 36.99 |
| TraesCS5A01G007800.1 | Wheat | nucleus | 39.59 | 36.0 |
| TraesCS4A01G200800.1 | Wheat | nucleus | 36.72 | 32.68 |
| TraesCS7A01G022600.1 | Wheat | nucleus | 25.89 | 31.68 |
| TraesCS4A01G289500.1 | Wheat | nucleus | 19.8 | 31.45 |
| TraesCS4A01G469900.1 | Wheat | nucleus | 25.55 | 30.44 |
| TraesCS5A01G514700.1 | Wheat | nucleus | 27.75 | 27.11 |
| TraesCS1A01G183400.1 | Wheat | nucleus | 26.73 | 26.96 |
| TraesCS1A01G281100.1 | Wheat | nucleus | 23.35 | 24.04 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 29.1 | 22.31 |
| TraesCS3A01G363900.1 | Wheat | nucleus | 23.52 | 22.13 |
| TraesCS7A01G358300.1 | Wheat | nucleus | 16.24 | 17.36 |
| GSMUA_Achr11P... | Banana | plastid | 8.46 | 12.25 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 |
| PFAM:PF07526 | InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF139 | SMART:SM00389 |
| SMART:SM00574 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS4A01G022700 | EnsemblPlants:TraesCS4A01G022700.1 | TIGR:cd00086 | SEG:seg |
Description
No Description!
Coordinates
chr4A:+:16246688..16248549
Molecular Weight (calculated)
63167.4 Da
IEP (calculated)
6.403
GRAVY (calculated)
-0.598
Length
591 amino acids
Sequence
(BLAST)
(BLAST)
001: MATFFSTSND QRGLAGGGGG GGDMSFHHHY PMSNQYPDSS TGGLIPLPAS IVQQSHIAHH GGGGDGRDDE PAAFMSSRDG SELGGLQTQM LMGDGGASAG
101: QRSHQGGLSL SLGSQVSVSL YQYGRPGGMA AAAFPTLMSP NQSAMAMAAS RNAQVNVYVQ NSRFLKAARE LLDEVVSVRD AIKRKGDRKD DSAGNGECGK
201: VEGDKGEENE GSSAAELSPA ERQDLQNKVT ALMAMLDQVD RRYRHYHQQM QMVVSSFDAV AGSGAAKPYT ALALQTISRH FRSLRDAIGA QVQSARRSLG
301: EPQDGSGAGG LSRLRYIDQH LRQQRAMQQF GMMQQPQHAW RPQRGLPESA VSVLRAWLFE HFLHPYPKDS EKVMLARQAG LSRGQVSNWF INARVRLWKP
401: MVEEMYKEEF GAEMDSTNSS SEKAGNKHGK VDEAACSEDQ DRDEFQSTST HAGASQLLNA YKSEPVGSMD AGPLSSLGGG DMGTTYAPAG PSLNHHGPGG
501: GSLLQDAFAH HGGDDARFVT YGGSMGDLGG SVSLTLGLQH CNNNNNNAGH VPPEQQGLLY GNPGDFDFLN GGDDRQRFAS SSSQLLHDFV T
101: QRSHQGGLSL SLGSQVSVSL YQYGRPGGMA AAAFPTLMSP NQSAMAMAAS RNAQVNVYVQ NSRFLKAARE LLDEVVSVRD AIKRKGDRKD DSAGNGECGK
201: VEGDKGEENE GSSAAELSPA ERQDLQNKVT ALMAMLDQVD RRYRHYHQQM QMVVSSFDAV AGSGAAKPYT ALALQTISRH FRSLRDAIGA QVQSARRSLG
301: EPQDGSGAGG LSRLRYIDQH LRQQRAMQQF GMMQQPQHAW RPQRGLPESA VSVLRAWLFE HFLHPYPKDS EKVMLARQAG LSRGQVSNWF INARVRLWKP
401: MVEEMYKEEF GAEMDSTNSS SEKAGNKHGK VDEAACSEDQ DRDEFQSTST HAGASQLLNA YKSEPVGSMD AGPLSSLGGG DMGTTYAPAG PSLNHHGPGG
501: GSLLQDAFAH HGGDDARFVT YGGSMGDLGG SVSLTLGLQH CNNNNNNAGH VPPEQQGLLY GNPGDFDFLN GGDDRQRFAS SSSQLLHDFV T
001: MATYYKTGSS EIYSRPEFVP GNAMNYTNSF TETFPRDSTN NVSPSKEIQV LSSLGGVSQM VEIQDSGSWR DQEDNDRNRF PVMRRLGLSS QIETSRGNNN
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA
101: NEYATQVVSG FTRTIHNSKY LKAAQELLDE TVNVKKALKQ FQPEGDKINE VKEKNLQTNT AEIPQAERQE LQSKLSKLLS ILDEVDRNYK QYYHQMQIVV
201: SSFDVIAGCG AAKPYTALAL QTISRHFRCL RDAISGQILV IRKSLGGEQD GSDGRGVGIS RLRNVDQQVR QQRALQRLGV MQPHTWRPQR GLPDSSVLVL
301: RAWLFEHFLH PYPKDSDKIM LARQTGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFTDAL QENDPNQSSE NTPEITEIQE LQTESSSNNG HVPGVASSSM
401: RQNTVAHGGD RFMMVTDMTR NGNGGMSLTL GIQNSDARGD VPMSGGIDNY KNTISGTDLQ YLNSRNHQHQ IGSSQLLHDF VA
Arabidopsis Description
BLH7BEL1-like homeodomain protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIW1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.