Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G019800.1 | Wheat | nucleus | 85.69 | 87.99 |
| TraesCS7A01G022600.1 | Wheat | nucleus | 84.48 | 86.75 |
| Os06t0108900-02 | Rice | nucleus | 57.66 | 53.96 |
| Zm00001d035907_P001 | Maize | nucleus | 54.03 | 53.82 |
| EER89055 | Sorghum | nucleus | 56.05 | 53.05 |
| CDY45383 | Canola | nucleus | 24.19 | 45.63 |
| GSMUA_Achr1P06400_001 | Banana | nucleus | 37.7 | 36.24 |
| GSMUA_Achr2P04310_001 | Banana | nucleus | 39.72 | 35.3 |
| TraesCS1A01G183400.1 | Wheat | nucleus | 38.71 | 32.76 |
| VIT_02s0025g00200.t01 | Wine grape | nucleus | 42.54 | 32.66 |
| CDY44476 | Canola | nucleus | 37.1 | 32.39 |
| Bra025497.1-P | Field mustard | nucleus | 37.5 | 31.37 |
| PGSC0003DMT400032122 | Potato | nucleus | 39.52 | 30.96 |
| KRH77572 | Soybean | nucleus | 39.92 | 30.65 |
| TraesCS5A01G514700.1 | Wheat | nucleus | 37.3 | 30.58 |
| KRH27902 | Soybean | nucleus | 39.52 | 30.53 |
| Solyc08g081400.2.1 | Tomato | nucleus | 39.52 | 30.43 |
| AT5G41410.1 | Thale cress | nucleus | 36.9 | 29.95 |
| KRH59951 | Soybean | nucleus | 38.31 | 29.92 |
| KRH41225 | Soybean | nucleus | 38.91 | 29.88 |
| TraesCS4A01G022700.1 | Wheat | nucleus | 30.44 | 25.55 |
| TraesCS4A01G289500.1 | Wheat | nucleus | 19.15 | 25.54 |
| TraesCS1A01G281100.1 | Wheat | nucleus | 27.62 | 23.87 |
| TraesCS5A01G007800.1 | Wheat | nucleus | 30.85 | 23.54 |
| TraesCS4A01G289400.1 | Wheat | nucleus | 30.04 | 23.35 |
| TraesCS4A01G252100.2 | Wheat | nucleus | 35.08 | 22.57 |
| TraesCS3A01G363900.1 | Wheat | nucleus | 28.43 | 22.45 |
| TraesCS4A01G200800.1 | Wheat | nucleus | 30.04 | 22.44 |
| TraesCS7A01G358300.1 | Wheat | nucleus | 19.56 | 17.54 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | PFAM:PF05920 | PFAM:PF07526 |
| InterPro:POX_dom | PFscan:PS50071 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF66 | SMART:SM00389 | SMART:SM00574 |
| SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS4A01G469900 | EnsemblPlants:TraesCS4A01G469900.1 | TIGR:cd00086 | SEG:seg | : |
Description
No Description!
Coordinates
chr4A:-:731338027..731340484
Molecular Weight (calculated)
54786.1 Da
IEP (calculated)
7.258
GRAVY (calculated)
-0.470
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MMASHEHHHH LLGFSSSSSP VTPSPAAMAM AFDHHGLLAL HDDMPPRPGG AHDRSWPPQV STLSLYGPAG GGPSYSLAGG EHELQPFTMA PPWMMSMQQQ
101: QQPFRLNSSR YLGPAKELLR EFCSLEGDAM NGGVMMMQAP KRDDDVEASS PACGPWGANP SVSSMDYMAL ERRKARLLSM VEEVDRCYRR YREKMRATEL
201: SFEAVAGTGA AHVYTKLAMR AMSRHFRCLR DALMGQIRTL KKSVGESRDA NGMLVAPGAS KGDTPRLRVV DQCLRRQRAF QQYGGAAAIE SCPWRPQRGL
301: PEHAVAVLRS WLFEHFLHPY PNDVDKHILA RQSGLSRSQV SNWFINARVR LWKPMIEKMY AEETIQHDDH GASSGRGEPA PADQHNNNLA AWTTVTTTTD
401: ESCHRFSSKN NPGDGFIPSS FVADSRQFLH GYSSLHGDGG SGVVSLTLGL QQQQAFASPA MITQQQSPLM IGAEEEDMVL PYKNLMGSEL LHDFVG
101: QQPFRLNSSR YLGPAKELLR EFCSLEGDAM NGGVMMMQAP KRDDDVEASS PACGPWGANP SVSSMDYMAL ERRKARLLSM VEEVDRCYRR YREKMRATEL
201: SFEAVAGTGA AHVYTKLAMR AMSRHFRCLR DALMGQIRTL KKSVGESRDA NGMLVAPGAS KGDTPRLRVV DQCLRRQRAF QQYGGAAAIE SCPWRPQRGL
301: PEHAVAVLRS WLFEHFLHPY PNDVDKHILA RQSGLSRSQV SNWFINARVR LWKPMIEKMY AEETIQHDDH GASSGRGEPA PADQHNNNLA AWTTVTTTTD
401: ESCHRFSSKN NPGDGFIPSS FVADSRQFLH GYSSLHGDGG SGVVSLTLGL QQQQAFASPA MITQQQSPLM IGAEEEDMVL PYKNLMGSEL LHDFVG
001: MARDQFYGHN NHHHQEQQHQ MINQIQGFDE TNQNPTDHHH YNHQIFGSNS NMGMMIDFSK QQQIRMTSGS DHHHHHHQTS GGTDQNQLLE DSSSAMRLCN
101: VNNDFPSEVN DERPPQRPSQ GLSLSLSSSN PTSISLQSFE LRPQQQQQQG YSGNKSTQHQ NLQHTQMMMM MMNSHHQNNN NNNHQHHNHH QFQIGSSKYL
201: SPAQELLSEF CSLGVKESDE EVMMMKHKKK QKGKQQEEWD TSHHSNNDQH DQSATTSSKK HVPPLHSLEF MELQKRKAKL LSMLEELKRR YGHYREQMRV
301: AAAAFEAAVG LGGAEIYTAL ASRAMSRHFR CLKDGLVGQI QATSQALGER EEDNRAVSIA ARGETPRLRL LDQALRQQKS YRQMTLVDAH PWRPQRGLPE
401: RAVTTLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW KPMIEEMYCE ETRSEQMEIT NPMMIDTKPD PDQLIRVEPE SLSSIVTNPT
501: SKSGHNSTHG TMSLGSTFDF SLYGNQAVTY AGEGGPRGDV SLTLGLQRND GNGGVSLALS PVTAQGGQLF YGRDHIEEGP VQYSASMLDD DQVQNLPYRN
601: LMGAQLLHDI V
101: VNNDFPSEVN DERPPQRPSQ GLSLSLSSSN PTSISLQSFE LRPQQQQQQG YSGNKSTQHQ NLQHTQMMMM MMNSHHQNNN NNNHQHHNHH QFQIGSSKYL
201: SPAQELLSEF CSLGVKESDE EVMMMKHKKK QKGKQQEEWD TSHHSNNDQH DQSATTSSKK HVPPLHSLEF MELQKRKAKL LSMLEELKRR YGHYREQMRV
301: AAAAFEAAVG LGGAEIYTAL ASRAMSRHFR CLKDGLVGQI QATSQALGER EEDNRAVSIA ARGETPRLRL LDQALRQQKS YRQMTLVDAH PWRPQRGLPE
401: RAVTTLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW KPMIEEMYCE ETRSEQMEIT NPMMIDTKPD PDQLIRVEPE SLSSIVTNPT
501: SKSGHNSTHG TMSLGSTFDF SLYGNQAVTY AGEGGPRGDV SLTLGLQRND GNGGVSLALS PVTAQGGQLF YGRDHIEEGP VQYSASMLDD DQVQNLPYRN
601: LMGAQLLHDI V
Arabidopsis Description
BEL1Homeobox protein BEL1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q38897]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.