Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G340300.1 | Wheat | nucleus | 96.21 | 95.65 |
| TraesCS1B01G350500.1 | Wheat | cytosol, mitochondrion, nucleus | 91.84 | 91.3 |
| HORVU1Hr1G076490.1 | Barley | nucleus | 84.55 | 81.69 |
| EES19813 | Sorghum | nucleus | 52.48 | 53.73 |
| Os05t0517100-00 | Rice | mitochondrion | 49.27 | 53.48 |
| Zm00001d038714_P001 | Maize | nucleus | 48.69 | 53.02 |
| TraesCS3A01G289400.1 | Wheat | nucleus | 38.48 | 44.59 |
| GSMUA_Achr9P05640_001 | Banana | nucleus | 32.94 | 39.1 |
| GSMUA_Achr6P31770_001 | Banana | nucleus | 31.78 | 37.2 |
| TraesCS4A01G136100.1 | Wheat | mitochondrion | 20.7 | 25.54 |
| VIT_10s0003g01750.t01 | Wine grape | nucleus | 14.29 | 25.13 |
| TraesCS2A01G106000.1 | Wheat | nucleus | 19.83 | 24.37 |
| CDY09258 | Canola | mitochondrion | 18.95 | 20.31 |
| Bra020989.1-P | Field mustard | mitochondrion | 18.66 | 19.94 |
| CDX99420 | Canola | mitochondrion | 18.95 | 19.88 |
| TraesCS3A01G345100.1 | Wheat | nucleus | 20.7 | 19.61 |
| CDX78899 | Canola | mitochondrion | 18.37 | 19.33 |
| Bra013354.1-P | Field mustard | mitochondrion | 18.37 | 19.33 |
| TraesCS2A01G392200.1 | Wheat | mitochondrion | 14.29 | 19.07 |
| KRH11062 | Soybean | plastid | 20.41 | 18.92 |
| CDY01560 | Canola | nucleus | 19.53 | 18.82 |
| AT4G18830.1 | Thale cress | mitochondrion, nucleus, plastid | 18.66 | 18.34 |
| KRH21207 | Soybean | plastid | 21.87 | 18.12 |
| KRH59028 | Soybean | plastid | 21.28 | 17.85 |
| Bra012575.1-P | Field mustard | nucleus | 19.24 | 17.84 |
| KRH42918 | Soybean | plastid | 20.99 | 17.43 |
| TraesCS1A01G300100.1 | Wheat | mitochondrion | 18.95 | 17.11 |
| TraesCS1A01G185400.1 | Wheat | mitochondrion | 11.95 | 16.67 |
| TraesCS3A01G376000.1 | Wheat | plastid | 10.79 | 16.52 |
| TraesCS1A01G275500.1 | Wheat | nucleus, plastid | 10.79 | 16.16 |
| TraesCS5A01G492400.1 | Wheat | nucleus | 10.5 | 15.45 |
| TraesCS4A01G041100.1 | Wheat | mitochondrion | 12.54 | 15.3 |
| Solyc02g072030.1.1 | Tomato | mitochondrion, nucleus, plastid | 16.33 | 14.85 |
| TraesCS3A01G151800.1 | Wheat | nucleus, plastid | 14.87 | 14.45 |
| TraesCS6A01G258000.1 | Wheat | plastid | 12.24 | 14.38 |
| PGSC0003DMT400073252 | Potato | nucleus | 16.62 | 13.9 |
| CDY62560 | Canola | nucleus | 17.2 | 12.5 |
| TraesCS3A01G228900.1 | Wheat | nucleus | 11.95 | 12.35 |
| TraesCS2A01G396600.1 | Wheat | mitochondrion, plastid | 13.41 | 12.14 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G338100.1 | EnsemblPlantsGene:TraesCS1A01G338100 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF66 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 | MapMan:15.5.37 |
Description
No Description!
Coordinates
chr1A:-:527889774..527891529
Molecular Weight (calculated)
37000.9 Da
IEP (calculated)
12.104
GRAVY (calculated)
-0.742
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MGWGSRKQQH GTPSRASEQG GERKGGGKSK AFSFSFSPLS WLAKIAAKPK RTPASTHEGR GPGASAAAAA PPFKSALPER ASPAKVAIAP AGRLSSPSPR
101: RSPAVLRRLF VGNDNAEAVA ARGRHRPAAA VVATEEVVPR RLSVGNDSAD AVAPRRHCRP RRHCSVGGDR DLQAPLGKHI PFSLAGSPAQ PRPPPQAAAA
201: AAPSDTDGGG ARLRRRHRGR RHRRSVSGGR RSSFSGKVTL RVKVRSPRRS APELESLAVV RRTRDPQRAF RESMSEMIAS SGGTDARPEE LERLLACYLA
301: LNADEHHDCI VKVFCQVWFD HVNLPPPRRG RDREEHPGRH ARP
101: RSPAVLRRLF VGNDNAEAVA ARGRHRPAAA VVATEEVVPR RLSVGNDSAD AVAPRRHCRP RRHCSVGGDR DLQAPLGKHI PFSLAGSPAQ PRPPPQAAAA
201: AAPSDTDGGG ARLRRRHRGR RHRRSVSGGR RSSFSGKVTL RVKVRSPRRS APELESLAVV RRTRDPQRAF RESMSEMIAS SGGTDARPEE LERLLACYLA
301: LNADEHHDCI VKVFCQVWFD HVNLPPPRRG RDREEHPGRH ARP
001: MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK
Arabidopsis Description
OFP4Transcription repressor OFP4 [Source:UniProtKB/Swiss-Prot;Acc:F4HNU8]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.