Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012575.1-P | Field mustard | nucleus | 95.22 | 91.62 |
| CDY09258 | Canola | mitochondrion | 69.66 | 77.5 |
| AT4G18830.1 | Thale cress | mitochondrion, nucleus, plastid | 73.88 | 75.36 |
| CDX78899 | Canola | mitochondrion | 67.13 | 73.31 |
| CDX99420 | Canola | mitochondrion | 67.13 | 73.09 |
| CDY62560 | Canola | nucleus | 82.58 | 62.29 |
| CDY32706 | Canola | cytosol | 6.18 | 44.0 |
| CDY02814 | Canola | cytosol | 6.18 | 44.0 |
| VIT_10s0003g01750.t01 | Wine grape | nucleus | 18.54 | 33.85 |
| GSMUA_Achr9P05640_001 | Banana | nucleus | 20.79 | 25.61 |
| HORVU3Hr1G071640.1 | Barley | nucleus | 19.94 | 24.57 |
| TraesCS3B01G324100.1 | Wheat | nucleus | 19.94 | 24.4 |
| TraesCS3A01G289400.1 | Wheat | nucleus | 20.22 | 24.32 |
| TraesCS3D01G289200.1 | Wheat | nucleus | 20.22 | 24.32 |
| CDY04827 | Canola | nucleus | 17.42 | 24.12 |
| CDX84837 | Canola | nucleus | 15.73 | 23.33 |
| GSMUA_Achr6P31770_001 | Banana | nucleus | 18.54 | 22.53 |
| Solyc02g072030.1.1 | Tomato | mitochondrion, nucleus, plastid | 23.6 | 22.28 |
| CDX75076 | Canola | nucleus | 11.52 | 22.04 |
| CDY43753 | Canola | nucleus | 11.52 | 22.04 |
| CDY58970 | Canola | mitochondrion | 12.92 | 21.5 |
| CDX92512 | Canola | mitochondrion | 12.92 | 21.5 |
| CDY44933 | Canola | mitochondrion | 12.36 | 21.36 |
| CDY10735 | Canola | nucleus | 18.26 | 21.04 |
| PGSC0003DMT400073252 | Potato | nucleus | 24.16 | 20.98 |
| Zm00001d038714_P001 | Maize | nucleus | 18.54 | 20.95 |
| CDY67505 | Canola | nucleus, plastid | 17.7 | 20.93 |
| CDY42284 | Canola | mitochondrion | 12.08 | 20.77 |
| CDY09945 | Canola | nucleus, plastid | 17.42 | 20.6 |
| CDY02063 | Canola | nucleus | 17.98 | 20.58 |
| Os05t0517100-00 | Rice | mitochondrion | 18.26 | 20.57 |
| HORVU1Hr1G076490.1 | Barley | nucleus | 20.51 | 20.56 |
| CDY62219 | Canola | nucleus | 17.7 | 20.39 |
| CDY06241 | Canola | mitochondrion | 17.13 | 20.27 |
| CDY43860 | Canola | nucleus | 16.29 | 20.0 |
| TraesCS1D01G340300.1 | Wheat | nucleus | 19.38 | 20.0 |
| CDY32990 | Canola | nucleus | 16.01 | 19.93 |
| CDX97830 | Canola | nucleus | 17.7 | 19.87 |
| KRH42918 | Soybean | plastid | 23.03 | 19.85 |
| Zm00001d043470_P001 | Maize | mitochondrion, nucleus | 18.82 | 19.82 |
| CDY29674 | Canola | nucleus | 17.98 | 19.75 |
| KRH11062 | Soybean | plastid | 20.51 | 19.73 |
| TraesCS1B01G350500.1 | Wheat | cytosol, mitochondrion, nucleus | 19.1 | 19.71 |
| EES19813 | Sorghum | nucleus | 18.54 | 19.7 |
| KRH59028 | Soybean | plastid | 22.47 | 19.56 |
| TraesCS1A01G338100.1 | Wheat | cytosol | 18.82 | 19.53 |
| EES01480 | Sorghum | nucleus | 19.38 | 19.49 |
| KRH21207 | Soybean | plastid | 20.79 | 17.87 |
| CDY59540 | Canola | plastid | 14.04 | 17.3 |
| CDY29238 | Canola | nucleus, plastid | 14.61 | 17.16 |
| CDY36485 | Canola | nucleus | 14.89 | 16.99 |
| CDY72229 | Canola | nucleus | 14.61 | 16.56 |
| CDY43893 | Canola | nucleus | 14.33 | 16.19 |
| CDY32705 | Canola | mitochondrion | 7.58 | 13.37 |
| CDY02815 | Canola | plastid | 5.9 | 10.61 |
Protein Annotations
| EnsemblPlants:CDY01560 | EnsemblPlantsGene:GSBRNA2T00112598001 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | ncoils:Coil |
| PANTHER:PTHR33057 | PANTHER:PTHR33057:SF10 | PFAM:PF04844 | PFscan:PS51754 | ProteinID:CDY01560 | ProteinID:CDY01560.1 |
| SEG:seg | TIGRFAMs:TIGR01568 | UniParc:UPI0004EF068C | MapMan:15.5.37 | : | : |
Description
BnaC07g35500D
Coordinates
chrLK031927:+:649336..650655
Molecular Weight (calculated)
41512.5 Da
IEP (calculated)
10.531
GRAVY (calculated)
-1.129
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKWGKKKPV SSSSSSSPGL SRAHHVSWFS KLTGSSDLKL AKEKKKQDDD EASQKMSSKS SLGSTKRRND THESSKRFQR VSAEKENATT RSANMESNEK
101: FEEIMSSVRK KVRDFQRETM DGDKETVIMT PRIQVNRDRQ QRCERRDQKL LEQKPKRPEQ NTEVKVKKPA RRTGTSNSRE TLVAHQWQHL KETKLREVKL
201: KADKQRKSMY LRRELGTKEN SKVRVFSPRS SEKCRVKAIE DLKKAKQRAK EQEMENESFA VVKCSSDPQK DFRDSMIEMI MENGINRPEE LKELLVCYLR
301: LNSDEYHDMI INVFQQVHND LFIHATSRLL AYSLCSHLHN SIPSSTRGIQ RDYIKS
101: FEEIMSSVRK KVRDFQRETM DGDKETVIMT PRIQVNRDRQ QRCERRDQKL LEQKPKRPEQ NTEVKVKKPA RRTGTSNSRE TLVAHQWQHL KETKLREVKL
201: KADKQRKSMY LRRELGTKEN SKVRVFSPRS SEKCRVKAIE DLKKAKQRAK EQEMENESFA VVKCSSDPQK DFRDSMIEMI MENGINRPEE LKELLVCYLR
301: LNSDEYHDMI INVFQQVHND LFIHATSRLL AYSLCSHLHN SIPSSTRGIQ RDYIKS
001: MMRWGRKKPV SSSSSSGLSR ALPVSWFSKL SGSSDLKPAK EKKQDEKASQ NISVKTSLSS TTRRSDIHEN SKRFQRVSVE KENSATRSAD KESNEKFEEI
101: MSSVRKKVRD FQKETCGFLE VEAMDRDNGT VILTPRIQVN RDKQRCERRD QRLLEQKPKR SEQDAGVKVK KPARRTGTGG YSREDSVILG HTITKPAHQW
201: EKLKEVKLRE VKLKADQQRK SLYLKRELNR IGTKENNKVR VFSPRASEKC RVKAIEDLKK AKQRAREHEL LIETADGGME NESFAVVKCS SDPQKDFRDS
301: MIEMIMENGI NHPEELKELL VCYLRLNTDE YHDMIISVFQ QVHNDFNFH
101: MSSVRKKVRD FQKETCGFLE VEAMDRDNGT VILTPRIQVN RDKQRCERRD QRLLEQKPKR SEQDAGVKVK KPARRTGTGG YSREDSVILG HTITKPAHQW
201: EKLKEVKLRE VKLKADQQRK SLYLKRELNR IGTKENNKVR VFSPRASEKC RVKAIEDLKK AKQRAREHEL LIETADGGME NESFAVVKCS SDPQKDFRDS
301: MIEMIMENGI NHPEELKELL VCYLRLNTDE YHDMIISVFQ QVHNDFNFH
Arabidopsis Description
OFP5Transcription repressor OFP5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZN1]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.