Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G338100.1 | Wheat | cytosol | 81.69 | 84.55 |
| TraesCS1D01G340300.1 | Wheat | nucleus | 80.85 | 83.19 |
| TraesCS1B01G350500.1 | Wheat | cytosol, mitochondrion, nucleus | 80.85 | 83.19 |
| EES19813 | Sorghum | nucleus | 51.55 | 54.63 |
| Os05t0517100-00 | Rice | mitochondrion | 48.17 | 54.11 |
| Zm00001d038714_P001 | Maize | nucleus | 47.89 | 53.97 |
| HORVU3Hr1G071640.1 | Barley | nucleus | 40.0 | 49.13 |
| GSMUA_Achr9P05640_001 | Banana | nucleus | 31.55 | 38.75 |
| GSMUA_Achr6P31770_001 | Banana | nucleus | 31.27 | 37.88 |
| VIT_10s0003g01750.t01 | Wine grape | nucleus | 14.08 | 25.64 |
| HORVU4Hr1G049960.1 | Barley | mitochondrion | 19.72 | 25.0 |
| CDY09258 | Canola | mitochondrion | 19.44 | 21.56 |
| CDX99420 | Canola | mitochondrion | 19.72 | 21.41 |
| Bra020989.1-P | Field mustard | mitochondrion | 19.15 | 21.18 |
| Bra013354.1-P | Field mustard | mitochondrion | 19.15 | 20.86 |
| CDX78899 | Canola | mitochondrion | 19.15 | 20.86 |
| CDY01560 | Canola | nucleus | 20.56 | 20.51 |
| HORVU2Hr1G093380.1 | Barley | mitochondrion | 14.37 | 20.0 |
| AT4G18830.1 | Thale cress | mitochondrion, nucleus, plastid | 19.44 | 19.77 |
| Bra012575.1-P | Field mustard | nucleus | 20.28 | 19.46 |
| HORVU3Hr1G081260.2 | Barley | mitochondrion | 21.13 | 19.13 |
| KRH11062 | Soybean | plastid | 19.72 | 18.92 |
| KRH59028 | Soybean | plastid | 21.13 | 18.34 |
| KRH21207 | Soybean | plastid | 20.85 | 17.87 |
| KRH42918 | Soybean | plastid | 20.56 | 17.68 |
| HORVU3Hr1G083700.1 | Barley | plastid | 10.14 | 16.07 |
| HORVU1Hr1G069900.1 | Barley | endoplasmic reticulum, mitochondrion, nucleus, plastid | 18.87 | 15.91 |
| HORVU1Hr1G074020.1 | Barley | nucleus, plastid | 10.14 | 15.86 |
| Solyc02g072030.1.1 | Tomato | mitochondrion, nucleus, plastid | 16.62 | 15.65 |
| HORVU1Hr1G049440.1 | Barley | mitochondrion | 10.7 | 15.26 |
| PGSC0003DMT400073252 | Potato | nucleus | 17.46 | 15.12 |
| HORVU4Hr1G083150.1 | Barley | plastid | 10.7 | 15.02 |
| HORVU3Hr1G030870.1 | Barley | nucleus | 14.37 | 14.25 |
| HORVU6Hr1G065900.1 | Barley | mitochondrion, plastid | 11.83 | 14.14 |
| CDY62560 | Canola | nucleus | 18.31 | 13.77 |
| HORVU4Hr1G070860.1 | Barley | cytosol, mitochondrion | 12.11 | 12.8 |
| HORVU3Hr1G055980.1 | Barley | nucleus | 11.55 | 12.2 |
| HORVU2Hr1G094240.1 | Barley | cytosol, mitochondrion, plastid | 11.83 | 11.7 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G076490.1 | EnsemblPlantsGene:HORVU1Hr1G076490 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF66 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 | UniParc:UPI000B476C20 |
| UniProt:A0A287GB60 | MapMan:15.5.37 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:514369019..514370593
Molecular Weight (calculated)
38566.6 Da
IEP (calculated)
11.982
GRAVY (calculated)
-0.777
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MRWGSKKQQH GTSPCAPEQG GEAGERKGSA KSKAFSFSPL SWLAKLASNS KLRAATKVGS GTTPKHALVS THEERAAPAF SSCLRERTTP AKVAIARVGR
101: RSSPRRSPAA TSQVVPRRLF VGNGNDNADA VAARGHHRSP VAVVATEEVV PRRLSVGNDN ADADAVAARR HCRPRRHCSV GGDRDLQAPL GKHIPFSLAG
201: SPAQPAPPPQ TASAAAPSDT DGGGARQRRR HRGRRHRRSL SGGRRSSFSG KVTLRVKVRS PRRSAPELES LAVVRRTRDP QRAFRESMSE MIASSGGTDA
301: RPEELERLLA CYLALNADEH HDCIVKVFRQ VWFDHVNLPP PRRGREEHPG RHARP
101: RSSPRRSPAA TSQVVPRRLF VGNGNDNADA VAARGHHRSP VAVVATEEVV PRRLSVGNDN ADADAVAARR HCRPRRHCSV GGDRDLQAPL GKHIPFSLAG
201: SPAQPAPPPQ TASAAAPSDT DGGGARQRRR HRGRRHRRSL SGGRRSSFSG KVTLRVKVRS PRRSAPELES LAVVRRTRDP QRAFRESMSE MIASSGGTDA
301: RPEELERLLA CYLALNADEH HDCIVKVFRQ VWFDHVNLPP PRRGREEHPG RHARP
001: MMRWGRKKPV SSSSSSGLSR ALPVSWFSKL SGSSDLKPAK EKKQDEKASQ NISVKTSLSS TTRRSDIHEN SKRFQRVSVE KENSATRSAD KESNEKFEEI
101: MSSVRKKVRD FQKETCGFLE VEAMDRDNGT VILTPRIQVN RDKQRCERRD QRLLEQKPKR SEQDAGVKVK KPARRTGTGG YSREDSVILG HTITKPAHQW
201: EKLKEVKLRE VKLKADQQRK SLYLKRELNR IGTKENNKVR VFSPRASEKC RVKAIEDLKK AKQRAREHEL LIETADGGME NESFAVVKCS SDPQKDFRDS
301: MIEMIMENGI NHPEELKELL VCYLRLNTDE YHDMIISVFQ QVHNDFNFH
101: MSSVRKKVRD FQKETCGFLE VEAMDRDNGT VILTPRIQVN RDKQRCERRD QRLLEQKPKR SEQDAGVKVK KPARRTGTGG YSREDSVILG HTITKPAHQW
201: EKLKEVKLRE VKLKADQQRK SLYLKRELNR IGTKENNKVR VFSPRASEKC RVKAIEDLKK AKQRAREHEL LIETADGGME NESFAVVKCS SDPQKDFRDS
301: MIEMIMENGI NHPEELKELL VCYLRLNTDE YHDMIISVFQ QVHNDFNFH
Arabidopsis Description
OFP5Transcription repressor OFP5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZN1]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.