Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038714_P001 | Maize | nucleus | 75.22 | 80.0 |
| Os05t0517100-00 | Rice | mitochondrion | 56.12 | 59.49 |
| TraesCS1A01G338100.1 | Wheat | cytosol | 53.73 | 52.48 |
| TraesCS1D01G340300.1 | Wheat | nucleus | 53.13 | 51.59 |
| HORVU1Hr1G076490.1 | Barley | nucleus | 54.63 | 51.55 |
| TraesCS1B01G350500.1 | Wheat | cytosol, mitochondrion, nucleus | 52.54 | 51.01 |
| EES01480 | Sorghum | nucleus | 45.97 | 43.5 |
| GSMUA_Achr9P05640_001 | Banana | nucleus | 33.13 | 38.41 |
| GSMUA_Achr6P31770_001 | Banana | nucleus | 33.13 | 37.88 |
| OQU90474 | Sorghum | mitochondrion | 22.09 | 26.71 |
| EES17993 | Sorghum | nucleus, plastid | 18.81 | 25.51 |
| VIT_10s0003g01750.t01 | Wine grape | nucleus | 14.63 | 25.13 |
| OQU92638 | Sorghum | mitochondrion | 21.19 | 24.15 |
| EES18387 | Sorghum | mitochondrion | 22.39 | 19.89 |
| CDY09258 | Canola | mitochondrion | 18.81 | 19.69 |
| Bra020989.1-P | Field mustard | mitochondrion | 18.51 | 19.31 |
| KXG20752 | Sorghum | cytosol, nucleus | 10.15 | 19.21 |
| CDX99420 | Canola | mitochondrion | 18.51 | 18.96 |
| KRH11062 | Soybean | plastid | 20.9 | 18.92 |
| CDY01560 | Canola | nucleus | 19.7 | 18.54 |
| Bra013354.1-P | Field mustard | mitochondrion | 17.61 | 18.1 |
| CDX78899 | Canola | mitochondrion | 17.61 | 18.1 |
| KRH59028 | Soybean | plastid | 21.49 | 17.6 |
| Bra012575.1-P | Field mustard | nucleus | 19.4 | 17.57 |
| KRH42918 | Soybean | plastid | 21.49 | 17.43 |
| KRH21207 | Soybean | plastid | 21.49 | 17.39 |
| EES17897 | Sorghum | nucleus, plastid | 15.52 | 17.22 |
| AT4G18830.1 | Thale cress | mitochondrion, nucleus, plastid | 17.91 | 17.19 |
| KXG33158 | Sorghum | cytosol, plastid | 6.57 | 15.83 |
| EES03931 | Sorghum | plastid | 11.04 | 15.68 |
| EES18304 | Sorghum | nucleus, plastid | 10.45 | 15.28 |
| Solyc02g072030.1.1 | Tomato | mitochondrion, nucleus, plastid | 17.01 | 15.12 |
| EER92948 | Sorghum | plastid | 11.34 | 14.9 |
| OQU85631 | Sorghum | plastid | 13.43 | 14.61 |
| OQU78505 | Sorghum | nucleus | 15.52 | 14.44 |
| EER92692 | Sorghum | mitochondrion | 13.43 | 14.42 |
| EER94592 | Sorghum | mitochondrion | 11.94 | 14.18 |
| PGSC0003DMT400073252 | Potato | nucleus | 17.01 | 13.9 |
| KXG33624 | Sorghum | nucleus | 21.49 | 13.26 |
| EES02214 | Sorghum | mitochondrion, nucleus | 14.63 | 12.96 |
| CDY62560 | Canola | nucleus | 18.21 | 12.92 |
| EES03313 | Sorghum | nucleus | 14.63 | 11.81 |
| EES11304 | Sorghum | plastid | 13.73 | 11.25 |
Protein Annotations
| MapMan:15.5.37 | EntrezGene:8067516 | UniProt:C5Z0Z6 | EnsemblPlants:EES19813 | ProteinID:EES19813 | ProteinID:EES19813.1 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045892 |
| InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PFAM:PF04844 | PFscan:PS51754 | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF66 | EnsemblPlantsGene:SORBI_3009G198800 | TIGRFAMs:TIGR01568 | UniParc:UPI0001A89078 | RefSeq:XP_002441383.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:-:54900759..54902961
Molecular Weight (calculated)
36091.9 Da
IEP (calculated)
12.131
GRAVY (calculated)
-0.728
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MRWGIRKQNA APSARCEEDD GGERGSKGKG KGKGRGTFSF SPLSWLAKLA AKEKPGAGAG AATKRAPAST PNNTAAAAPA FPSSCLPNAK RTSPSPAAAT
101: VTPGWSSFSP PRRSTDNKDV LPRRLSVGND NADSVAVRRQ SYRHGGRRHC SVGGDRELPP LGRLIPFSLA GSPARPRAAT APSDTDAAGA RRHRRRRRSS
201: RRLSVSGGSR RPSFSGRMPP PRVRVRSPRR AAAAVAAPAE LEGLAVVRRT RDPQRAFRES MVEMIASATG GPAAVPPRPE ELERLLACYL SLNADEHHDC
301: IVKVFRQVWF EYISLLPRPE SGGRPRRRPP TARRC
101: VTPGWSSFSP PRRSTDNKDV LPRRLSVGND NADSVAVRRQ SYRHGGRRHC SVGGDRELPP LGRLIPFSLA GSPARPRAAT APSDTDAAGA RRHRRRRRSS
201: RRLSVSGGSR RPSFSGRMPP PRVRVRSPRR AAAAVAAPAE LEGLAVVRRT RDPQRAFRES MVEMIASATG GPAAVPPRPE ELERLLACYL SLNADEHHDC
301: IVKVFRQVWF EYISLLPRPE SGGRPRRRPP TARRC
001: MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK
101: SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK
201: TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF
301: VQVWLEVINS TFASK
Arabidopsis Description
OFP4Transcription repressor OFP4 [Source:UniProtKB/Swiss-Prot;Acc:F4HNU8]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.