Factsheet for Bra012575.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01560	Canola	nucleus	91.62	95.22
Bra020989.1-P	Field mustard	mitochondrion	66.22	76.32
AT4G18830.1	Thale cress	mitochondrion, nucleus, plastid	69.46	73.64
Bra013354.1-P	Field mustard	mitochondrion	63.78	72.39
CDY62560	Canola	nucleus	82.16	64.41
VIT_10s0003g01750.t01	Wine grape	nucleus	17.3	32.82
Bra024464.1-P	Field mustard	cytosol	7.57	32.18
GSMUA_Achr9P05640_001	Banana	nucleus	19.46	24.91
HORVU3Hr1G071640.1	Barley	nucleus	18.65	23.88
TraesCS3B01G324100.1	Wheat	nucleus	18.65	23.71
Bra017266.1-P	Field mustard	nucleus	11.89	23.66
TraesCS3A01G289400.1	Wheat	nucleus	18.92	23.65
TraesCS3D01G289200.1	Wheat	nucleus	18.92	23.65
Bra040948.1-P	Field mustard	nucleus	16.76	23.57
Bra005303.1-P	Field mustard	mitochondrion, plastid	11.35	22.58
GSMUA_Achr6P31770_001	Banana	nucleus	17.57	22.18
Solyc02g072030.1.1	Tomato	mitochondrion, nucleus, plastid	22.16	21.75
PGSC0003DMT400073252	Potato	nucleus	22.97	20.73
Bra002252.1-P	Field mustard	mitochondrion	11.89	20.66
Bra018316.1-P	Field mustard	nucleus	17.57	20.57
Bra022796.1-P	Field mustard	nucleus	17.03	20.45
Zm00001d038714_P001	Maize	nucleus	17.3	20.32
HORVU1Hr1G076490.1	Barley	nucleus	19.46	20.28
Bra031546.1-P	Field mustard	mitochondrion, nucleus, plastid	16.49	20.27
Os05t0517100-00	Rice	mitochondrion	17.3	20.25
Bra020055.1-P	Field mustard	mitochondrion	11.08	19.9
Zm00001d043470_P001	Maize	mitochondrion, nucleus	18.11	19.82
Bra021632.1-P	Field mustard	nucleus	17.3	19.75
TraesCS1D01G340300.1	Wheat	nucleus	18.38	19.71
EES01480	Sorghum	nucleus	18.65	19.49
KRH11062	Soybean	plastid	19.46	19.46
TraesCS1B01G350500.1	Wheat	cytosol, mitochondrion, nucleus	18.11	19.42
EES19813	Sorghum	nucleus	17.57	19.4
KRH42918	Soybean	plastid	21.62	19.37
TraesCS1A01G338100.1	Wheat	cytosol	17.84	19.24
KRH59028	Soybean	plastid	21.08	19.07
KRH21207	Soybean	plastid	20.0	17.87
Bra002657.1-P	Field mustard	nucleus	15.41	16.67
Bra039604.1-P	Field mustard	nucleus	14.05	16.51

Protein Annotations

EnsemblPlants:Bra012575.1	EnsemblPlants:Bra012575.1-P	EnsemblPlantsGene:Bra012575	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045892	InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C
ncoils:Coil	PANTHER:PTHR33057	PANTHER:PTHR33057:SF10	PFAM:PF04844	PFscan:PS51754	SEG:seg
TIGRFAMs:TIGR01568	UniParc:UPI00025403CA	UniProt:M4D7W5	MapMan:15.5.37	:	:

Description

AT4G18830 (E=4e-110) ATOFP5, OFP5 | OFP5 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 5)

Coordinates

chrA03:+:23458838..23460120

Molecular Weight (calculated)

43141.4 Da

IEP (calculated)

10.530

GRAVY (calculated)

-1.133

Length

370 amino acids

Sequence
(BLAST)

001: MMKWGKKKPI SSSSSPGLSR AHHVSWFSKL TGSSDLKLAK EKKKQDDDEA IQKMSSKSSL SSTKRQNDTH ESSKRLQRVS AEKENATTRS ANMESNEKFE
101: EIMSSVRKKV RDFQRETMDG DKETVIMTPR IQVNRDRQQR CERRDQKLLE QKPKRPEQNT EVKVKKPARR TGTSNSRETL VAHQWQHLKE TKLREVKLKA
201: DKQRKSMYLR RELGTKENSK VRVFSPRSSE KCRVKAIEDL KKAKLRAKEQ EMENESFAVV KCSSDPQKDF RDSMIEMIME NGINRPEELK ELLVCYLRLN
301: TDEYHDMIIN VFQQSFDFSH ATSRLLAYSL CSHLHNSIPS STRGTSLTSE HDLKSPWNQL QKKQRGYIKS

Best Arabidopsis Sequence Match ( AT4G18830.1 )
(BLAST)

001: MMRWGRKKPV SSSSSSGLSR ALPVSWFSKL SGSSDLKPAK EKKQDEKASQ NISVKTSLSS TTRRSDIHEN SKRFQRVSVE KENSATRSAD KESNEKFEEI
101: MSSVRKKVRD FQKETCGFLE VEAMDRDNGT VILTPRIQVN RDKQRCERRD QRLLEQKPKR SEQDAGVKVK KPARRTGTGG YSREDSVILG HTITKPAHQW
201: EKLKEVKLRE VKLKADQQRK SLYLKRELNR IGTKENNKVR VFSPRASEKC RVKAIEDLKK AKQRAREHEL LIETADGGME NESFAVVKCS SDPQKDFRDS
301: MIEMIMENGI NHPEELKELL VCYLRLNTDE YHDMIISVFQ QVHNDFNFH

Arabidopsis Description

OFP5Transcription repressor OFP5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZN1]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.