Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G289200.1 | Wheat | nucleus | 95.19 | 93.58 |
| TraesCS3A01G289400.1 | Wheat | nucleus | 93.81 | 92.23 |
| HORVU3Hr1G071640.1 | Barley | nucleus | 84.19 | 84.78 |
| EES01480 | Sorghum | nucleus | 60.82 | 50.0 |
| Zm00001d043470_P001 | Maize | mitochondrion, nucleus | 56.36 | 48.52 |
| GSMUA_Achr9P05640_001 | Banana | nucleus | 42.27 | 42.56 |
| GSMUA_Achr6P31770_001 | Banana | nucleus | 41.24 | 40.96 |
| TraesCS1B01G350500.1 | Wheat | cytosol, mitochondrion, nucleus | 45.7 | 38.55 |
| VIT_10s0003g01750.t01 | Wine grape | nucleus | 17.87 | 26.67 |
| TraesCS4B01G168800.1 | Wheat | mitochondrion, nucleus, plastid | 23.37 | 24.73 |
| CDX99420 | Canola | mitochondrion | 24.4 | 21.71 |
| TraesCS2B01G123000.1 | Wheat | nucleus | 20.27 | 21.61 |
| CDY09258 | Canola | mitochondrion | 23.71 | 21.56 |
| Bra020989.1-P | Field mustard | mitochondrion | 23.37 | 21.18 |
| CDX78899 | Canola | mitochondrion | 23.71 | 21.17 |
| Bra013354.1-P | Field mustard | mitochondrion | 23.71 | 21.17 |
| CDY01560 | Canola | nucleus | 24.4 | 19.94 |
| TraesCS2B01G410500.1 | Wheat | mitochondrion | 17.18 | 19.76 |
| AT4G18830.1 | Thale cress | mitochondrion, nucleus, plastid | 23.37 | 19.48 |
| KRH11062 | Soybean | plastid | 24.4 | 19.19 |
| KRH59028 | Soybean | plastid | 26.8 | 19.07 |
| KRH42918 | Soybean | plastid | 26.8 | 18.89 |
| Bra012575.1-P | Field mustard | nucleus | 23.71 | 18.65 |
| TraesCS3B01G377200.1 | Wheat | mitochondrion, nucleus | 23.02 | 18.51 |
| KRH21207 | Soybean | plastid | 23.71 | 16.67 |
| TraesCS1B01G310200.1 | Wheat | mitochondrion, plastid | 19.59 | 15.97 |
| TraesCS3B01G408300.1 | Wheat | plastid | 12.37 | 15.93 |
| TraesCS1B01G193300.1 | Wheat | mitochondrion | 13.4 | 15.85 |
| TraesCS4B01G262000.1 | Wheat | mitochondrion | 14.78 | 15.58 |
| TraesCS1B01G284700.1 | Wheat | plastid | 12.03 | 15.49 |
| Solyc02g072030.1.1 | Tomato | mitochondrion, nucleus, plastid | 19.59 | 15.12 |
| TraesCS6B01G267100.1 | Wheat | plastid | 15.46 | 15.1 |
| PGSC0003DMT400073252 | Potato | nucleus | 20.27 | 14.39 |
| CDY62560 | Canola | nucleus | 22.34 | 13.77 |
| TraesCS4B01G319700.1 | Wheat | plastid | 14.09 | 13.44 |
| TraesCS3B01G255700.1 | Wheat | nucleus | 15.46 | 13.43 |
| TraesCS2B01G415000.1 | Wheat | mitochondrion | 16.84 | 13.1 |
| TraesCS3B01G178800.1 | Wheat | nucleus | 15.12 | 12.43 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G324100.1 | EnsemblPlantsGene:TraesCS3B01G324100 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | PANTHER:PTHR33057 |
| PANTHER:PTHR33057:SF20 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 | MapMan:15.5.37 |
Description
No Description!
Coordinates
chr3B:+:525014150..525015382
Molecular Weight (calculated)
31941.8 Da
IEP (calculated)
11.345
GRAVY (calculated)
-0.666
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MRWWGLKTKQ QQLLPQDQAH EESKSGKGKA AFSPLTWFSK LTAKHNAAAS SKPKKHAAPE AKSSGGGFHE GATPSPASRS SPPDTLSPAA ADIVPRRLSV
101: GNDDAEAEAT AARQLSRRRH YSVGGDRDLP PLSHLSAFSR AASSPQCVLA TAPTPVLTLP SDTDEEKRPR SHQRRRRGSG RRSFSGRTTP GARLAAVRVR
201: SPRCTVVAVS GLERFAVVRR TSDPQREFRN SMVEMITSKR IGRPEELETL LACYLALNAE EHHDCIVKVF RQVWFELNPA RIATVTSRPR S
101: GNDDAEAEAT AARQLSRRRH YSVGGDRDLP PLSHLSAFSR AASSPQCVLA TAPTPVLTLP SDTDEEKRPR SHQRRRRGSG RRSFSGRTTP GARLAAVRVR
201: SPRCTVVAVS GLERFAVVRR TSDPQREFRN SMVEMITSKR IGRPEELETL LACYLALNAE EHHDCIVKVF RQVWFELNPA RIATVTSRPR S
001: MMRWGRKKPV SSSSSSGLSR ALPVSWFSKL SGSSDLKPAK EKKQDEKASQ NISVKTSLSS TTRRSDIHEN SKRFQRVSVE KENSATRSAD KESNEKFEEI
101: MSSVRKKVRD FQKETCGFLE VEAMDRDNGT VILTPRIQVN RDKQRCERRD QRLLEQKPKR SEQDAGVKVK KPARRTGTGG YSREDSVILG HTITKPAHQW
201: EKLKEVKLRE VKLKADQQRK SLYLKRELNR IGTKENNKVR VFSPRASEKC RVKAIEDLKK AKQRAREHEL LIETADGGME NESFAVVKCS SDPQKDFRDS
301: MIEMIMENGI NHPEELKELL VCYLRLNTDE YHDMIISVFQ QVHNDFNFH
101: MSSVRKKVRD FQKETCGFLE VEAMDRDNGT VILTPRIQVN RDKQRCERRD QRLLEQKPKR SEQDAGVKVK KPARRTGTGG YSREDSVILG HTITKPAHQW
201: EKLKEVKLRE VKLKADQQRK SLYLKRELNR IGTKENNKVR VFSPRASEKC RVKAIEDLKK AKQRAREHEL LIETADGGME NESFAVVKCS SDPQKDFRDS
301: MIEMIMENGI NHPEELKELL VCYLRLNTDE YHDMIISVFQ QVHNDFNFH
Arabidopsis Description
OFP5Transcription repressor OFP5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZN1]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.