Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G185400.1 | Wheat | mitochondrion | 98.78 | 98.78 |
| TraesCS1D01G191500.1 | Wheat | mitochondrion | 97.97 | 97.97 |
| HORVU1Hr1G049440.1 | Barley | mitochondrion | 93.5 | 92.37 |
| Os10t0532600-01 | Rice | mitochondrion | 77.64 | 72.62 |
| EER94592 | Sorghum | mitochondrion | 69.92 | 60.99 |
| Zm00001d029718_P001 | Maize | mitochondrion | 63.82 | 60.38 |
| Zm00001d047346_P001 | Maize | mitochondrion | 65.85 | 58.91 |
| GSMUA_Achr5P20250_001 | Banana | plastid | 41.06 | 48.79 |
| GSMUA_Achr11P... | Banana | plastid | 32.93 | 47.09 |
| GSMUA_Achr1P03740_001 | Banana | plastid | 30.08 | 42.53 |
| GSMUA_Achr8P12190_001 | Banana | plastid | 32.93 | 41.33 |
| Solyc11g068780.1.1 | Tomato | cytosol | 22.36 | 40.15 |
| PGSC0003DMT400050511 | Potato | cytosol | 21.14 | 37.41 |
| AT3G52525.1 | Thale cress | plastid | 21.54 | 33.33 |
| VIT_08s0007g02550.t01 | Wine grape | mitochondrion, plastid | 25.2 | 33.33 |
| Solyc10g082050.1.1 | Tomato | mitochondrion | 23.98 | 33.15 |
| KRH72226 | Soybean | mitochondrion | 23.17 | 32.76 |
| KRH67981 | Soybean | mitochondrion | 25.2 | 32.63 |
| Solyc01g007800.2.1 | Tomato | mitochondrion | 23.98 | 32.42 |
| KRH32810 | Soybean | mitochondrion | 23.17 | 32.2 |
| PGSC0003DMT400042334 | Potato | mitochondrion | 23.98 | 32.07 |
| KRG96237 | Soybean | mitochondrion | 24.8 | 31.94 |
| TraesCS6B01G267100.1 | Wheat | plastid | 38.21 | 31.54 |
| TraesCS4B01G319700.1 | Wheat | plastid | 39.02 | 31.48 |
| PGSC0003DMT400072347 | Potato | mitochondrion, plastid | 23.58 | 30.69 |
| KRH26670 | Soybean | mitochondrion | 22.76 | 30.11 |
| Bra005303.1-P | Field mustard | mitochondrion, plastid | 22.76 | 30.11 |
| CDX75076 | Canola | nucleus | 22.76 | 30.11 |
| AT2G36026.1 | Thale cress | nucleus, plastid | 21.54 | 28.96 |
| KRH22646 | Soybean | mitochondrion, nucleus | 21.54 | 28.8 |
| CDY43753 | Canola | nucleus | 21.54 | 28.49 |
| Bra017266.1-P | Field mustard | nucleus | 21.54 | 28.49 |
| TraesCS2B01G415000.1 | Wheat | mitochondrion | 39.84 | 26.2 |
| KRH30374 | Soybean | nucleus, plastid | 20.73 | 25.89 |
| KRH25295 | Soybean | nucleus, plastid | 20.33 | 25.64 |
| TraesCS3B01G408300.1 | Wheat | plastid | 23.17 | 25.22 |
| TraesCS1B01G284700.1 | Wheat | plastid | 22.76 | 24.78 |
| TraesCS4B01G262000.1 | Wheat | mitochondrion | 18.29 | 16.3 |
| TraesCS3B01G255700.1 | Wheat | nucleus | 21.54 | 15.82 |
| TraesCS3B01G178800.1 | Wheat | nucleus | 22.76 | 15.82 |
| TraesCS2B01G410500.1 | Wheat | mitochondrion | 16.26 | 15.81 |
| TraesCS3B01G324100.1 | Wheat | nucleus | 15.85 | 13.4 |
| TraesCS1B01G310200.1 | Wheat | mitochondrion, plastid | 18.29 | 12.61 |
| TraesCS2B01G123000.1 | Wheat | nucleus | 13.82 | 12.45 |
| TraesCS3B01G377200.1 | Wheat | mitochondrion, nucleus | 17.89 | 12.15 |
| TraesCS4B01G168800.1 | Wheat | mitochondrion, nucleus, plastid | 13.01 | 11.64 |
| TraesCS1B01G350500.1 | Wheat | cytosol, mitochondrion, nucleus | 15.45 | 11.01 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G193300.1 | EnsemblPlantsGene:TraesCS1B01G193300 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045892 | InterPro:IPR006458 | InterPro:Ovate | InterPro:Ovate_C | ncoils:Coil |
| PANTHER:PTHR33057 | PANTHER:PTHR33057:SF34 | PFAM:PF04844 | PFscan:PS51754 | SEG:seg | TIGRFAMs:TIGR01568 |
| MapMan:15.5.37 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:346402604..346403344
Molecular Weight (calculated)
26201.1 Da
IEP (calculated)
11.210
GRAVY (calculated)
-0.398
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAMILRRRG AGGGLRIKRK GRGFMCGCGG SKAVSVSDGS DKQSPMATPP TNTSTATTAT TMSTVTTTAT RRAGNSRAAS LISTAAASSS FSPSSTDEAD
101: TSVGSTPSVA ALLRQLGELE RTVRSLQGAG AEGVGDGRRH RRTASEGGGR RVEESVAVVK ESADPLADFR RSMLQMIVEK EIVGGADLRE LLHRFLSLNS
201: PHHHHLILRA FAEIWEEVFS GYERTPDFLV SHSHGRKRLP AANSLR
101: TSVGSTPSVA ALLRQLGELE RTVRSLQGAG AEGVGDGRRH RRTASEGGGR RVEESVAVVK ESADPLADFR RSMLQMIVEK EIVGGADLRE LLHRFLSLNS
201: PHHHHLILRA FAEIWEEVFS GYERTPDFLV SHSHGRKRLP AANSLR
001: MTTGKSKKKK MVLKAVSVVD IGCGNCKFPS LSSFFNPSPK KPRLYSSNYG HCHSSTPTTA SSSSAVPSTS HWFSDTSSSS ATPSAAAVAV EKDSDDPYLD
101: FRQSMLQMIL ENEIYSKNDL RELLHCFLSL NEPYHHGIII RAFSEIWDGV FSAAKRRGDV QESPLVHRHG SRASHRNHYH RSK
101: FRQSMLQMIL ENEIYSKNDL RELLHCFLSL NEPYHHGIII RAFSEIWDGV FSAAKRRGDV QESPLVHRHG SRASHRNHYH RSK
Arabidopsis Description
Ovate family protein [Source:UniProtKB/TrEMBL;Acc:B3H6R4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.