CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90950
EER91090
EER95833
KXG40306
OQU90921
OQU91064

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52525.1	KXG40306	AT1G62990.1	15781858
AT3G52525.1	EER90950	AT4G08150.1	15781858
AT3G52525.1	EER91090	AT4G08150.1	15781858
AT3G52525.1	EER95833	AT4G08150.1	15781858
AT3G52525.1	OQU90921	AT4G08150.1	15781858
AT3G52525.1	OQU91064	AT4G08150.1	15781858

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029718_P001	Maize	mitochondrion	73.05	79.23
Zm00001d047346_P001	Maize	mitochondrion	74.47	76.36
TraesCS1B01G193300.1	Wheat	mitochondrion	60.99	69.92
TraesCS1D01G191500.1	Wheat	mitochondrion	60.28	69.11
TraesCS1A01G185400.1	Wheat	mitochondrion	60.28	69.11
HORVU1Hr1G049440.1	Barley	mitochondrion	58.51	66.27
Os10t0532600-01	Rice	mitochondrion	61.7	66.16
GSMUA_Achr5P20250_001	Banana	plastid	34.04	46.38
GSMUA_Achr11P...	Banana	plastid	26.6	43.6
GSMUA_Achr1P03740_001	Banana	plastid	26.24	42.53
Solyc11g068780.1.1	Tomato	cytosol	19.5	40.15
EER92948	Sorghum	plastid	36.17	40.0
GSMUA_Achr8P12190_001	Banana	plastid	27.3	39.29
PGSC0003DMT400050511	Potato	cytosol	18.44	37.41
KRH72226	Soybean	mitochondrion	21.28	34.48
OQU85631	Sorghum	plastid	37.59	34.42
Solyc10g082050.1.1	Tomato	mitochondrion	21.28	33.71
Solyc01g007800.2.1	Tomato	mitochondrion	21.63	33.52
KRG96237	Soybean	mitochondrion	22.7	33.51
VIT_08s0007g02550.t01	Wine grape	mitochondrion, plastid	21.99	33.33
AT3G52525.1	Thale cress	plastid	18.79	33.33
KRH67981	Soybean	mitochondrion	22.34	33.16
PGSC0003DMT400042334	Potato	mitochondrion	21.63	33.15
KRH32810	Soybean	mitochondrion	20.57	32.77
PGSC0003DMT400072347	Potato	mitochondrion, plastid	21.28	31.75
AT2G36026.1	Thale cress	nucleus, plastid	19.86	30.6
CDX75076	Canola	nucleus	19.86	30.11
Bra005303.1-P	Field mustard	mitochondrion, plastid	19.86	30.11
CDY43753	Canola	nucleus	18.44	27.96
Bra017266.1-P	Field mustard	nucleus	18.44	27.96
KRH26670	Soybean	mitochondrion	18.44	27.96
KRH22646	Soybean	mitochondrion, nucleus	18.09	27.72
EES11304	Sorghum	plastid	37.94	26.16
KRH25295	Soybean	nucleus, plastid	17.38	25.13
KRH30374	Soybean	nucleus, plastid	17.38	24.87
EES03931	Sorghum	plastid	20.57	24.58
KXG20752	Sorghum	cytosol, nucleus	14.89	23.73
EES18304	Sorghum	nucleus, plastid	18.79	23.14
KXG33158	Sorghum	cytosol, plastid	10.28	20.86
EES17897	Sorghum	nucleus, plastid	19.5	18.21
EES17993	Sorghum	nucleus, plastid	14.89	17.0
EES02214	Sorghum	mitochondrion, nucleus	20.92	15.61
OQU78505	Sorghum	nucleus	19.86	15.56
OQU90474	Sorghum	mitochondrion	14.89	15.16
EER92692	Sorghum	mitochondrion	15.96	14.42
EES03313	Sorghum	nucleus	20.21	13.73
EES18387	Sorghum	mitochondrion	16.31	12.2
EES19813	Sorghum	nucleus	14.18	11.94
EES01480	Sorghum	nucleus	14.89	11.86
OQU92638	Sorghum	mitochondrion	11.35	10.88
KXG33624	Sorghum	nucleus	15.6	8.1

Protein Annotations

MapMan:15.5.37	EntrezGene:8062614	UniProt:C5WUG4	EnsemblPlants:EER94592	ProteinID:EER94592	ProteinID:EER94592.1
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045892
InterPro:IPR006458	InterPro:Ovate	InterPro:Ovate_C	PFAM:PF04844	PFscan:PS51754	PANTHER:PTHR33057
PANTHER:PTHR33057:SF34	EnsemblPlantsGene:SORBI_3001G316300	TIGRFAMs:TIGR01568	UniParc:UPI0001A8309E	RefSeq:XP_002467594.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:60421471..60422601

Molecular Weight (calculated)

29828.2 Da

IEP (calculated)

10.555

GRAVY (calculated)

-0.541

Length

282 amino acids

Sequence
(BLAST)

001: MRVLLSRRRG AAGRVLCIKK KARGFMCGCG GTKAISISDG SSDKQSPMAT PQTAASTTPL TAMSTTTTRS TRRRGGNRPP PPAAAATSNT EAPSSFSSSS
101: LYADTTTDDG GPSSMESTPS LSALLRQLGE LERSVRFLHT AGPTGNGAEA GAGAGVTDGN KQQNGGGGGR RHRRTVSEGC GGGSGRVEES VAVVKESADP
201: LGDFRRSMLQ MIVENEIVGG AELRELLHRF LSLNSPHHHH LILRAFAEIW EEVFAGYDRT PDLLVSHRNK KQQHHLPTTR GA

Best Arabidopsis Sequence Match ( AT2G36026.1 )
(BLAST)

001: MTTGKSKKKK MVLKAVSVVD IGCGNCKFPS LSSFFNPSPK KPRLYSSNYG HCHSSTPTTA SSSSAVPSTS HWFSDTSSSS ATPSAAAVAV EKDSDDPYLD
101: FRQSMLQMIL ENEIYSKNDL RELLHCFLSL NEPYHHGIII RAFSEIWDGV FSAAKRRGDV QESPLVHRHG SRASHRNHYH RSK

Arabidopsis Description

Ovate family protein [Source:UniProtKB/TrEMBL;Acc:B3H6R4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.