Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027431_P002 | Maize | nucleus | 91.64 | 95.48 |
| Zm00001d048471_P001 | Maize | nucleus | 93.19 | 94.65 |
| Os03t0123500-02 | Rice | nucleus | 90.71 | 93.31 |
| TraesCS5A01G515000.1 | Wheat | nucleus | 86.38 | 89.42 |
| TraesCS4B01G346100.1 | Wheat | nucleus | 86.38 | 89.42 |
| TraesCS4D01G341000.1 | Wheat | nucleus | 85.45 | 88.75 |
| HORVU4Hr1G084680.1 | Barley | nucleus | 85.45 | 87.62 |
| GSMUA_Achr1P03660_001 | Banana | nucleus | 75.85 | 84.19 |
| KRH27981 | Soybean | nucleus | 66.25 | 76.7 |
| KRH77464 | Soybean | nucleus | 66.25 | 76.16 |
| VIT_02s0025g04630.t01 | Wine grape | nucleus | 67.49 | 74.91 |
| KRH03996 | Soybean | nucleus | 67.49 | 74.66 |
| KRH57265 | Soybean | nucleus | 67.18 | 74.06 |
| CDX93852 | Canola | nucleus | 50.77 | 73.87 |
| AT1G62990.1 | Thale cress | nucleus | 66.25 | 73.54 |
| Bra036636.1-P | Field mustard | nucleus | 66.56 | 73.13 |
| CDY64892 | Canola | nucleus | 66.25 | 72.79 |
| CDY66559 | Canola | nucleus | 66.25 | 72.79 |
| CDY45968 | Canola | nucleus | 65.63 | 72.35 |
| Bra027006.1-P | Field mustard | nucleus | 65.02 | 71.19 |
| Solyc08g080120.2.1 | Tomato | nucleus | 66.25 | 69.03 |
| PGSC0003DMT400058528 | Potato | nucleus | 66.56 | 68.91 |
| OQU84501 | Sorghum | nucleus | 52.94 | 55.88 |
| KXG20488 | Sorghum | nucleus | 54.49 | 55.17 |
| EES00633 | Sorghum | nucleus | 23.84 | 26.19 |
| EES18954 | Sorghum | nucleus | 24.15 | 25.74 |
| EER91090 | Sorghum | nucleus | 23.84 | 23.05 |
| EER95833 | Sorghum | nucleus | 25.08 | 22.75 |
| EER90950 | Sorghum | nucleus | 25.08 | 22.5 |
| OQU90921 | Sorghum | nucleus | 23.84 | 22.06 |
| OQU91064 | Sorghum | nucleus | 23.84 | 20.75 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | UniProt:A0A1B6QQV9 | InterPro:ELK_dom | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0010089 | GO:GO:0010192 | GO:GO:0045892 | GO:GO:2000652 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 | InterPro:KNOX1 | InterPro:KNOX2 | EnsemblPlants:KXG40306 |
| ProteinID:KXG40306 | ProteinID:KXG40306.1 | PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 | PFscan:PS50071 |
| PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF74 | SMART:SM00389 | SMART:SM01255 | SMART:SM01256 |
| EnsemblPlantsGene:SORBI_3001G526200 | SUPFAM:SSF46689 | UniParc:UPI00026630BC | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr1:-:79021004..79026139
Molecular Weight (calculated)
35156.6 Da
IEP (calculated)
6.049
GRAVY (calculated)
-0.467
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGGGGGGDQ AGGSLGMDMG VGYAAGSGGA ECSSSTSAAA AAAAAAAAAA AAAAAEAEER QLLKGEIAVH PLCEQLVAAH VGCLRVATPI DHLPLIDAQL
101: AQSSGLLHSY AAHHRPFLSP HDKHDLDSFL AQYLMLLCSF REQLQQHVRV HAVEAVMACR EIEQSLQDLT GATLEEGTGA TMSEDEDEPP MLEGALDMGS
201: DGHDMMGFGP LLPTDSERSL MERVRQELKI ELKQGFKSRI EDVREEILRK RRAGKLPGDT TSILKQWWQQ HSKWPYPTED DKAKLVEETG LQLKQINNWF
301: INQRKRNWHN NSQTSTLKSK RKR
101: AQSSGLLHSY AAHHRPFLSP HDKHDLDSFL AQYLMLLCSF REQLQQHVRV HAVEAVMACR EIEQSLQDLT GATLEEGTGA TMSEDEDEPP MLEGALDMGS
201: DGHDMMGFGP LLPTDSERSL MERVRQELKI ELKQGFKSRI EDVREEILRK RRAGKLPGDT TSILKQWWQQ HSKWPYPTED DKAKLVEETG LQLKQINNWF
301: INQRKRNWHN NSQTSTLKSK RKR
001: MQEAALGMMG ATVGGDGDTA VVAEQNRQLK GEIATHPMYE QLLAAHVACL RVATPIDQLP IIEAQLSQSH HLLRSYASTA VGYHHDRHEL DNFLAQYVMV
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
Arabidopsis Description
KNAT7Homeobox protein knotted-1-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.