Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G346100.1 | Wheat | nucleus | 97.78 | 98.72 |
| TraesCS5A01G515000.1 | Wheat | nucleus | 97.78 | 98.72 |
| TraesCS4D01G341000.1 | Wheat | nucleus | 96.83 | 98.07 |
| Os03t0123500-02 | Rice | nucleus | 89.21 | 89.49 |
| Zm00001d027431_P002 | Maize | nucleus | 86.98 | 88.39 |
| Zm00001d048471_P001 | Maize | nucleus | 86.98 | 86.16 |
| KXG40306 | Sorghum | nucleus | 87.62 | 85.45 |
| GSMUA_Achr1P03660_001 | Banana | nucleus | 77.14 | 83.51 |
| KRH27981 | Soybean | nucleus | 66.67 | 75.27 |
| KRH77464 | Soybean | nucleus | 66.67 | 74.73 |
| VIT_02s0025g04630.t01 | Wine grape | nucleus | 67.94 | 73.54 |
| KRH03996 | Soybean | nucleus | 67.94 | 73.29 |
| KRH57265 | Soybean | nucleus | 67.62 | 72.7 |
| CDX93852 | Canola | nucleus | 50.48 | 71.62 |
| Bra036636.1-P | Field mustard | nucleus | 66.67 | 71.43 |
| CDY66559 | Canola | nucleus | 66.35 | 71.09 |
| CDY64892 | Canola | nucleus | 66.35 | 71.09 |
| AT1G62990.1 | Thale cress | nucleus | 65.4 | 70.79 |
| CDY45968 | Canola | nucleus | 64.76 | 69.62 |
| Bra027006.1-P | Field mustard | nucleus | 64.44 | 68.81 |
| Solyc08g080120.2.1 | Tomato | nucleus | 66.67 | 67.74 |
| PGSC0003DMT400058528 | Potato | nucleus | 66.98 | 67.63 |
| HORVU6Hr1G028610.2 | Barley | nucleus | 54.92 | 55.99 |
| HORVU7Hr1G114650.2 | Barley | nucleus | 51.75 | 50.46 |
| HORVU1Hr1G015720.1 | Barley | nucleus | 25.08 | 25.82 |
| HORVU4Hr1G003360.1 | Barley | nucleus | 23.17 | 22.74 |
| HORVU2Hr1G061320.3 | Barley | nucleus, plastid | 24.44 | 21.51 |
| HORVU4Hr1G009730.1 | Barley | nucleus | 24.76 | 21.43 |
| HORVU5Hr1G098570.6 | Barley | plastid | 25.4 | 19.7 |
| HORVU4Hr1G003410.3 | Barley | nucleus | 20.95 | 18.7 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.4 | EMBL:AK369536 | InterPro:ELK_dom | UniProt:F2E065 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0010089 | GO:GO:0010192 | GO:GO:0045892 | GO:GO:2000652 | EnsemblPlantsGene:HORVU4Hr1G084680 |
| EnsemblPlants:HORVU4Hr1G084680.1 | InterPro:Homeobox-like_sf | InterPro:Homeobox_KN_domain | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR005539 |
| InterPro:KNOX1 | InterPro:KNOX2 | PFAM:PF03789 | PFAM:PF03790 | PFAM:PF03791 | PFAM:PF05920 |
| PFscan:PS50071 | PFscan:PS51213 | PANTHER:PTHR11850 | PANTHER:PTHR11850:SF74 | SMART:SM00389 | SMART:SM01188 |
| SMART:SM01255 | SMART:SM01256 | SUPFAM:SSF46689 | UniParc:UPI0002007846 | SEG:seg | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E065]
Coordinates
chrchr4H:-:629524254..629534446
Molecular Weight (calculated)
34848.6 Da
IEP (calculated)
6.322
GRAVY (calculated)
-0.505
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSMQGVGDH GGGMEMSFGG GGGGGGECSS SSAAAVAVAA ASAAEAEERQ LLKGEMAVHP LCEQLVAAHV GCLRVATPID HLPLIDAQLA QSNGLLHSYA
101: AHHRPFLSPH DKQELDSFLA QYLMLLCSFR EQLQQHVRVH AVEAVMACRE IEQSLQDLTG ASLEEGTGAT MSEDEDEGPL MIMEAAPLDM SSNGHDMMGF
201: GPLVPTDTER SLMERVRQEL KIELKQGFKS RIGDVREEIL RKRRAGKLPG DTTTILKQWW QEHAKWPYPT EDDKAKLVEE TGLQLKQINN WFINQRKRNW
301: HNNSQTSTLK SKRKR
101: AHHRPFLSPH DKQELDSFLA QYLMLLCSFR EQLQQHVRVH AVEAVMACRE IEQSLQDLTG ASLEEGTGAT MSEDEDEGPL MIMEAAPLDM SSNGHDMMGF
201: GPLVPTDTER SLMERVRQEL KIELKQGFKS RIGDVREEIL RKRRAGKLPG DTTTILKQWW QEHAKWPYPT EDDKAKLVEE TGLQLKQINN WFINQRKRNW
301: HNNSQTSTLK SKRKR
001: MQEAALGMMG ATVGGDGDTA VVAEQNRQLK GEIATHPMYE QLLAAHVACL RVATPIDQLP IIEAQLSQSH HLLRSYASTA VGYHHDRHEL DNFLAQYVMV
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
101: LCSFKEQLQQ HVRVHAVEAV MACREIENNL HSLTGATLGE GSGATMSEDE DDLPMDFSSD NSGVDFSGGH DMTGFGPLLP TESERSLMER VRQELKLELK
201: QGFKSRIEDV REEIMRKRRA GKLPGDTTTV LKNWWQQHCK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSH SLTSLKSKRK H
Arabidopsis Description
KNAT7Homeobox protein knotted-1-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.